STBD1 (starch binding domain 1)

Download as csv Download as pdf

Log in to save this analysis

Save This Analysis

Title Project / Tag (optional) Note (optional)

Cancel Save

On this page

Gene miRNA Gene ontology Other IDs Protein Pathways Diseases linked via similar genes

Gene

• Entrez ID: 8987
• Gene name: Starch binding domain 1
• Gene symbol: STBD1
• Synonyms (NCBI Gene): GENEX3414, GENX-3414
• Chromosome: 4
• Chromosome location: 4q21.1

miRNA Show/Hide all (105)

miRTarBase ID	miRNA	Experiments	Reference
MIRT439525	hsa-miR-127-5p	HITS-CLIP	24374217
MIRT439525	hsa-miR-127-5p	HITS-CLIP	24374217
MIRT1396237	hsa-miR-1227	CLIP-seq
MIRT1396238	hsa-miR-128	CLIP-seq
MIRT1396239	hsa-miR-148a	CLIP-seq
MIRT1396240	hsa-miR-148b	CLIP-seq
MIRT1396241	hsa-miR-152	CLIP-seq
MIRT1396242	hsa-miR-181a	CLIP-seq
MIRT1396243	hsa-miR-181b	CLIP-seq
MIRT1396244	hsa-miR-181c	CLIP-seq
MIRT1396245	hsa-miR-181d	CLIP-seq
MIRT1396246	hsa-miR-23a	CLIP-seq
MIRT1396247	hsa-miR-23b	CLIP-seq
MIRT1396248	hsa-miR-23c	CLIP-seq
MIRT1396249	hsa-miR-2681	CLIP-seq
MIRT1396250	hsa-miR-27a	CLIP-seq
MIRT1396251	hsa-miR-27b	CLIP-seq
MIRT1396252	hsa-miR-3064-3p	CLIP-seq
MIRT1396253	hsa-miR-3145-3p	CLIP-seq
MIRT1396254	hsa-miR-3163	CLIP-seq
MIRT1396255	hsa-miR-34b	CLIP-seq
MIRT1396256	hsa-miR-3662	CLIP-seq
MIRT1396257	hsa-miR-369-3p	CLIP-seq
MIRT1396258	hsa-miR-374a	CLIP-seq
MIRT1396259	hsa-miR-374b	CLIP-seq
MIRT1396260	hsa-miR-375	CLIP-seq
MIRT1396261	hsa-miR-4262	CLIP-seq
MIRT1396262	hsa-miR-4263	CLIP-seq
MIRT1396263	hsa-miR-4420	CLIP-seq
MIRT1396264	hsa-miR-4428	CLIP-seq
MIRT1396265	hsa-miR-4503	CLIP-seq
MIRT1396266	hsa-miR-4705	CLIP-seq
MIRT1396267	hsa-miR-4795-3p	CLIP-seq
MIRT1396268	hsa-miR-488	CLIP-seq
MIRT1396269	hsa-miR-542-3p	CLIP-seq
MIRT1396270	hsa-miR-576-5p	CLIP-seq
MIRT1396271	hsa-miR-671-5p	CLIP-seq
MIRT1396272	hsa-miR-935	CLIP-seq
MIRT2118816	hsa-miR-3171	CLIP-seq
MIRT2118817	hsa-miR-4276	CLIP-seq
MIRT2118818	hsa-miR-4302	CLIP-seq
MIRT2341074	hsa-miR-106a	CLIP-seq
MIRT2341075	hsa-miR-106b	CLIP-seq
MIRT1396238	hsa-miR-128	CLIP-seq
MIRT2341076	hsa-miR-1305	CLIP-seq
MIRT2341077	hsa-miR-140-3p	CLIP-seq
MIRT2341078	hsa-miR-17	CLIP-seq
MIRT1396242	hsa-miR-181a	CLIP-seq
MIRT1396243	hsa-miR-181b	CLIP-seq
MIRT1396244	hsa-miR-181c	CLIP-seq
MIRT1396245	hsa-miR-181d	CLIP-seq
MIRT2341079	hsa-miR-1972	CLIP-seq
MIRT2341080	hsa-miR-20a	CLIP-seq
MIRT2341081	hsa-miR-20b	CLIP-seq
MIRT2341082	hsa-miR-224	CLIP-seq
MIRT1396246	hsa-miR-23a	CLIP-seq
MIRT1396247	hsa-miR-23b	CLIP-seq
MIRT1396248	hsa-miR-23c	CLIP-seq
MIRT1396249	hsa-miR-2681	CLIP-seq
MIRT1396250	hsa-miR-27a	CLIP-seq
MIRT1396251	hsa-miR-27b	CLIP-seq
MIRT2341083	hsa-miR-302a	CLIP-seq
MIRT2341084	hsa-miR-302b	CLIP-seq
MIRT2341085	hsa-miR-302c	CLIP-seq
MIRT2341086	hsa-miR-302d	CLIP-seq
MIRT2341087	hsa-miR-302e	CLIP-seq
MIRT2341088	hsa-miR-3123	CLIP-seq
MIRT2341089	hsa-miR-3140-3p	CLIP-seq
MIRT1396253	hsa-miR-3145-3p	CLIP-seq
MIRT2341090	hsa-miR-329	CLIP-seq
MIRT1396255	hsa-miR-34b	CLIP-seq
MIRT2341091	hsa-miR-3622a-3p	CLIP-seq
MIRT2341092	hsa-miR-3622b-3p	CLIP-seq
MIRT2341093	hsa-miR-362-3p	CLIP-seq
MIRT2341094	hsa-miR-3691-3p	CLIP-seq
MIRT2341095	hsa-miR-372	CLIP-seq
MIRT2341096	hsa-miR-373	CLIP-seq
MIRT2341097	hsa-miR-3941	CLIP-seq
MIRT1396261	hsa-miR-4262	CLIP-seq
MIRT1396262	hsa-miR-4263	CLIP-seq
MIRT1396263	hsa-miR-4420	CLIP-seq
MIRT2341098	hsa-miR-448	CLIP-seq
MIRT2341099	hsa-miR-4480	CLIP-seq
MIRT2341100	hsa-miR-4650-5p	CLIP-seq
MIRT2341101	hsa-miR-4662a-5p	CLIP-seq
MIRT2341102	hsa-miR-4717-5p	CLIP-seq
MIRT2341103	hsa-miR-4789-3p	CLIP-seq
MIRT2341104	hsa-miR-4789-5p	CLIP-seq
MIRT2341105	hsa-miR-483-3p	CLIP-seq
MIRT2341106	hsa-miR-498	CLIP-seq
MIRT2341107	hsa-miR-512-5p	CLIP-seq
MIRT2341108	hsa-miR-519d	CLIP-seq
MIRT2341109	hsa-miR-520a-3p	CLIP-seq
MIRT2341110	hsa-miR-520b	CLIP-seq
MIRT2341111	hsa-miR-520c-3p	CLIP-seq
MIRT2341112	hsa-miR-520d-3p	CLIP-seq
MIRT2341113	hsa-miR-520e	CLIP-seq
MIRT2341114	hsa-miR-520f	CLIP-seq
MIRT2341115	hsa-miR-548t	CLIP-seq
MIRT1396270	hsa-miR-576-5p	CLIP-seq
MIRT2341116	hsa-miR-603	CLIP-seq
MIRT2341117	hsa-miR-616	CLIP-seq
MIRT2341118	hsa-miR-668	CLIP-seq
MIRT1396271	hsa-miR-671-5p	CLIP-seq
MIRT2341119	hsa-miR-93	CLIP-seq

Gene ontology (GO) Show/Hide all (32)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	20562859, 20810658, 21893048, 24837458, 25416956, 28514442, 33961781, 34524948
GO:0005783	Component	Endoplasmic reticulum	IDA	9794794, 24837458
GO:0005783	Component	Endoplasmic reticulum	IEA
GO:0005789	Component	Endoplasmic reticulum membrane	IEA
GO:0005886	Component	Plasma membrane	IDA	9794794
GO:0005886	Component	Plasma membrane	IEA
GO:0005886	Component	Plasma membrane	TAS
GO:0005977	Process	Glycogen metabolic process	IEA
GO:0005980	Process	Glycogen catabolic process	IMP	20810658
GO:0006914	Process	Autophagy	IEA
GO:0007041	Process	Lysosomal transport	IGI	27358407
GO:0016020	Component	Membrane	IBA
GO:0016020	Component	Membrane	IDA	20810658
GO:0016020	Component	Membrane	IEA
GO:0016192	Process	Vesicle-mediated transport	IEA
GO:0019899	Function	Enzyme binding	IPI	24837458
GO:0030246	Function	Carbohydrate binding	IEA
GO:0030247	Function	Polysaccharide binding	IDA	24837458
GO:0030315	Component	T-tubule	IDA	9794794
GO:0030315	Component	T-tubule	IEA
GO:0034045	Component	Phagophore assembly site membrane	IEA
GO:0038024	Function	Cargo receptor activity	IEA
GO:0046907	Process	Intracellular transport	IEA
GO:0048471	Component	Perinuclear region of cytoplasm	IDA	20810658, 21893048
GO:0061723	Process	Glycophagy	IEA
GO:0061723	Process	Glycophagy	IMP	20810658
GO:0061753	Process	Substrate localization to autophagosome	IEA
GO:0070821	Component	Tertiary granule membrane	TAS
GO:0101003	Component	Ficolin-1-rich granule membrane	TAS
GO:2001069	Function	Glycogen binding	IDA	20810658
GO:2001069	Function	Glycogen binding	IEA
GO:2001070	Function	Starch binding	IEA

Other IDs

• MIM: 607406
• HGNC: 24854
• e!Ensembl: ENSG00000118804

Protein

• UniProt ID: O95210
• Protein name: Starch-binding domain-containing protein 1 (Genethonin-1) (Glycophagy cargo receptor STBD1)
• Protein function: Acts as a cargo receptor for glycogen. Delivers its cargo to an autophagic pathway called glycophagy, resulting in the transport of glycogen to lysosomes.
• PDB: 8X8A , 8X8K
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00686	CBM_20	263 → 354	Starch binding domain	Family

• Tissue specificity: TISSUE SPECIFICITY: Expressed at high level in skeletal and cardiac muscles. Moderately expressed in liver and placenta. No expression is found in pancreas, kidney or lung. Present in skeletal muscle, heart and placenta (at protein level). {ECO:0000269|Pu
• Sequence:

  MGAVWSALLVGGGLAGALFVWLLRGGPGDTGKDGDAEQEKDAPLGGAAIPGGHQSGSSGL
  SPGPSGQELVTKPEHLQESNGHLISKTKDLGKLQAASWRLQNPSREVCDNSREHVPSGQF
  PDTEAPATSETSNSRSYSEVSRNESLESPMGEWGFQKGQEISAKAATCFAEKLPSSNLLK
  NRAKEEMSLSDLNSQDRVDHEEWEMVPRHSSWGDVGVGGSLKAPVLNLNQGMDNGRSTLV
  EARGQQVHGKMERVAVMPAGSQQVSVRFQVHYVTSTDVQFIAVTGDHECLGRWNTYIPLH
  YNKDGFWSHSIFLPADTVVEWKFVLVENGGVTRWEECSNRFLETGHEDKVVHAWWGIH

• Sequence length: 358

Pathways

Reactome Pathway:

Neutrophil degranulation

Related Genes

No strongly related genes found yet for STBD1.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to STBD1.