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Gene Gene information from NCBI Gene database.
Entrez ID 146857
Gene name Schlafen family member 13
Gene symbol SLFN13
Synonyms (NCBI Gene)
SLFN10hSLFN13
Chromosome 17
Chromosome location 17q12
miRNA miRNA information provided by mirtarbase database.
474 Show/Hide all (474)
miRTarBase ID miRNA Experiments Reference
MIRT051096 hsa-miR-16-5p CLASH 23622248
MIRT653396 hsa-miR-1207-3p HITS-CLIP 23824327
MIRT653395 hsa-miR-186-3p HITS-CLIP 23824327
MIRT653393 hsa-miR-150-5p HITS-CLIP 23824327
MIRT653392 hsa-miR-619-5p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
15 Show/Hide all (15)
GO ID Ontology Definition Evidence Reference
GO:0000049 Function TRNA binding IBA
GO:0000166 Function Nucleotide binding IEA
GO:0003824 Function Catalytic activity IEA
GO:0004518 Function Nuclease activity IEA
GO:0004519 Function Endonuclease activity IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
614957 26481 ENSG00000154760
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q68D06
Protein name Schlafen family member 13 (EC 3.1.-.-) (Schlafen-13) (hSLFN13)
Protein function Endoribonuclease that cleaves tRNAs and rRNAs (PubMed:29563550). Cleaves tRNAs 11 nucleotides from the 3'-terminus at the acceptor stem (PubMed:29563550). Does not act on tRNA(Sec) (PubMed:29563550). Able to restrict HIV-1 virus replication; abi
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04326 AlbA_2 208 → 339 Putative DNA-binding domain Domain
PF09848 DUF2075 592 → 747 Uncharacterized conserved protein (DUF2075) Family
Sequence
MEANHCSLGVYPSYPDLVIDVGEVTLGEENRKKLQKTQRDQERARVIRAACALLNSGGGV
IQMEMANRDERPTEMGLDLEESLRKLIQYPYLQAFFETKQHGRCFYIFVKSWSGDPFLKD
GSFNSRICSLSSSLYCRSGTSVLHMNSRQAFDFLKTKERQSKYNLINEGSPPSKIMKAVY
QNISESNPAYEVFQTDTIEYGEILSFPESPSIEFKQFSTKHIQQYVENIIPEYISAFANT
EGGYLFIGVDDKSRKVLGCAKEQVDPDSLKNVIARAISKLPIVHFCSSKPRVEYSTKIVE
VFCGKELYGYLCVIKVKAFCCVVFSEAPKSWMVREKYIR
PLTTEEWVEKMMDADPEFPPD
FAEAFESQLSLSDSPSLCRPVYSKKGLEHKADLQQHLFPVPPGHLECTPESLWKELSLQH
EGLKELIHKQMRPFSQGIVILSRSWAVDLNLQEKPGVICDALLIAQNSTPILYTILREQD
AEGQDYCTRTAFTLKQKLVNMGGYTGKVCVRAKVLCLSPESSAEALEAAVSPMDYPASYS
LAGTQHMEALLQSLVIVLLGFRSLLSDQLGCEVLNLLTAQQYEIFSRSLRKNRELFVHGL
PGSGKTIMAMKIMEKIRNVFHCEAHRILYVCENQPLRNFISDRNICRAETRETFLREKFE
HIQHIVIDEAQNFRTEDGDWYRKAKTITQREKDCPGVLWIFLDYFQTSHLGHSGLPPLSA
QYPREELTRVVRNADEIAEYIQQEMQL
IIENPPINIPHGYLAILSEAKWVPGVPGNTKII
KNFTLEQIVTYVADTCRCFFERGYSPKDVAVLVSTVTEVEQYQSKLLKAMRKKMVVQLSD
ACDMLGVHIVLDSVRRFSGLERSIVFGIHPRTADPAILPNILICLASRAKQHLYIFL
Sequence length 897
Interactions View interactions