Gene Gene information from NCBI Gene database.
Entrez ID 6401
Gene name Selectin E
Gene symbol SELE
Synonyms (NCBI Gene)
CD62EELAMELAM1ESELLECAM2selectin-e
Chromosome 1
Chromosome location 1q24.2
Summary The protein encoded by this gene is found in cytokine-stimulated endothelial cells and is thought to be responsible for the accumulation of blood leukocytes at sites of inflammation by mediating the adhesion of cells to the vascular lining. It exhibits st
miRNA miRNA information provided by mirtarbase database.
50
miRTarBase ID miRNA Experiments Reference
MIRT004019 hsa-miR-31-5p ImmunocytochemistryNorthern blotqRT-PCRWestern blot 19949084
MIRT005711 hsa-miR-17-5p Luciferase reporter assay 19949084
MIRT005712 hsa-miR-17-3p Luciferase reporter assay 19949084
MIRT005713 hsa-miR-155-5p Luciferase reporter assay 19949084
MIRT005714 hsa-miR-221-3p Luciferase reporter assay 19949084
Transcription factors Transcription factors information provided by TRRUST V2 database.
9
Transcription factor Regulation Reference
ATF3 Repression 10964678
HOXA9 Unknown 22269951
NFKB1 Activation 10946302;12408953;12885753;19422386
NFKB1 Unknown 8878392
REL Activation 12408953
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
45
GO ID Ontology Definition Evidence Reference
GO:0002092 Process Positive regulation of receptor internalization IDA 9312078
GO:0002523 Process Leukocyte migration involved in inflammatory response TAS 18029551
GO:0002687 Process Positive regulation of leukocyte migration IEA
GO:0004888 Function Transmembrane signaling receptor activity IMP 12960351
GO:0005515 Function Protein binding IPI 18606703, 32814053
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
131210 10718 ENSG00000007908
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P16581
Protein name E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
Protein function Cell-surface glycoprotein having a role in immunoadhesion. Mediates in the adhesion of blood neutrophils in cytokine-activated endothelium through interaction with SELPLG/PSGL1. May have a role in capillary morphogenesis. {ECO:0000269|PubMed:168
PDB 1ESL , 1G1T , 4C16 , 4CSY , 6EYI , 6EYJ , 6EYK , 8R5L , 8R5M
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00059 Lectin_C 29 140 Lectin C-type domain Domain
PF00008 EGF 143 173 EGF-like domain Domain
PF00084 Sushi 180 237 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 242 299 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 304 362 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 367 425 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 430 488 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 493 547 Sushi repeat (SCR repeat) Domain
Sequence
Sequence length 610
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
17
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ATRIAL FIBRILLATION CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BRAIN ISCHEMIA CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CARDIOVASCULAR DISEASES CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CEREBROVASCULAR DISORDERS Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute Coronary Syndrome Coronary Syndrome BEFREE 25147432
★☆☆☆☆
Found in Text Mining only
Acute leukemia Leukemia BEFREE 17532767
★☆☆☆☆
Found in Text Mining only
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 30204466
★☆☆☆☆
Found in Text Mining only
Acute pancreatitis Pancreatitis BEFREE 28007459
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 10232599, 7591266
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of colon Adenocarcinoma Of Colon BEFREE 7591266
★☆☆☆☆
Found in Text Mining only
Adult Acute Lymphocytic Leukemia Lymphocytic Leukemia BEFREE 30204466
★☆☆☆☆
Found in Text Mining only
Age related macular degeneration Age-related macular degeneration LHGDN 17057786
★☆☆☆☆
Found in Text Mining only
Age related macular degeneration Age-related macular degeneration BEFREE 21521525
★☆☆☆☆
Found in Text Mining only
Aggressive Periodontitis Aggressive Periodontitis BEFREE 15925831
★☆☆☆☆
Found in Text Mining only