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Gene Gene information from NCBI Gene database.
Entrez ID 55269
Gene name Paraspeckle component 1
Gene symbol PSPC1
Synonyms (NCBI Gene)
PSP1
Chromosome 13
Chromosome location 13q12.11
Summary This gene encodes a nucleolar protein that localizes to punctate subnuclear structures that occur close to splicing speckles, known as paraspeckles. These paraspeckles are composed of RNA-protein structures that include a non-coding RNA, NEAT1/Men epsilon
miRNA miRNA information provided by mirtarbase database.
279 Show/Hide all (279)
miRTarBase ID miRNA Experiments Reference
MIRT612649 hsa-miR-548ae-3p HITS-CLIP 23824327
MIRT612648 hsa-miR-548ah-3p HITS-CLIP 23824327
MIRT612647 hsa-miR-548aj-3p HITS-CLIP 23824327
MIRT612646 hsa-miR-548am-3p HITS-CLIP 23824327
MIRT612645 hsa-miR-548aq-3p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
29 Show/Hide all (29)
GO ID Ontology Definition Evidence Reference
GO:0001650 Component Fibrillar center IDA
GO:0002218 Process Activation of innate immune response IDA 28712728
GO:0002218 Process Activation of innate immune response IEA
GO:0002376 Process Immune system process IEA
GO:0003676 Function Nucleic acid binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
612408 20320 ENSG00000121390
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q8WXF1
Protein name Paraspeckle component 1 (Paraspeckle protein 1)
Protein function RNA-binding protein required for the formation of nuclear paraspeckles (PubMed:22416126). Binds to poly(A), poly(G) and poly(U) RNA homopolymers (PubMed:22416126). Regulates, cooperatively with NONO and SFPQ, androgen receptor-mediated gene tran
PDB 3SDE , 5IFN , 5WPA
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00076 RRM_1 84 → 148 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Domain
PF00076 RRM_1 158 → 223 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Domain
PF08075 NOPS 229 → 280 NOPS (NUC059) domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in pancreas, kidney, skeletal muscle, liver, lung, placenta, brain and heart. {ECO:0000269|PubMed:11790299}.
Sequence
MMLRGNLKQVRIEKNPARLRALESAVGESEPAAAAAMALALAGEPAPPAPAPPEDHPDEE
MGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFG
FIRLESRTLAEIAKAELDGTILKSRPLR
IRFATHGAALTVKNLSPVVSNELLEQAFSQFG
PVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLL
TTTPRPVIVEPMEQFDD
EDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWK
ALDEMEKQQREQVDRNIREA
KEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRRE
EEMIRHREQEELRRQQEGFKPNYMENREQEMRMGDMGPRGAINMGDAFSPAPAGNQGPPP
MMGMNMNNRATIPGPPMGPGPAMGPEGAANMGTPMMPDNGAVHNDRFPQGPPSQMGSPMG
SRTGSETPQAPMSGVGPVSGGPGGFGRGSQGGNFEGPNKRRRY
Sequence length 523
Interactions View interactions