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Gene Gene information from NCBI Gene database.
Entrez ID 56127
Gene name Protocadherin beta 9
Gene symbol PCDHB9
Synonyms (NCBI Gene)
PCDH-BETA9PCDH3H
Chromosome 5
Chromosome location 5q31.3
Summary This gene is a member of the protocadherin beta gene cluster, one of three related gene clusters tandemly linked on chromosome five. The gene clusters demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters.
miRNA miRNA information provided by mirtarbase database.
340 Show/Hide all (340)
miRTarBase ID miRNA Experiments Reference
MIRT1217263 hsa-miR-1183 CLIP-seq
MIRT1217264 hsa-miR-1225-3p CLIP-seq
MIRT1217265 hsa-miR-1227 CLIP-seq
MIRT1217266 hsa-miR-1233 CLIP-seq
MIRT1217267 hsa-miR-1273 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
14 Show/Hide all (14)
GO ID Ontology Definition Evidence Reference
GO:0005509 Function Calcium ion binding IEA
GO:0005886 Component Plasma membrane IBA
GO:0005886 Component Plasma membrane IEA
GO:0007155 Process Cell adhesion IBA
GO:0007155 Process Cell adhesion IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
606335 8694 ENSG00000177839
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9Y5E1
Protein name Protocadherin beta-9 (PCDH-beta-9) (Protocadherin-3H)
Protein function Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00028 Cadherin 247 → 338 Cadherin domain Domain
PF00028 Cadherin 456 → 552 Cadherin domain Domain
PF00028 Cadherin 138 → 233 Cadherin domain Domain
PF00028 Cadherin 575 → 663 Cadherin domain Domain
PF00028 Cadherin 352 → 442 Cadherin domain Domain
PF08266 Cadherin_2 30 → 112 Cadherin-like Domain
PF16492 Cadherin_C_2 685 → 768 Cadherin cytoplasmic C-terminal Family
Sequence
Sequence length 797
Interactions View interactions