PCDHB7 (protocadherin beta 7)

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Gene miRNA Gene ontology Other IDs Protein Related genes Diseases linked via similar genes

Gene

• Entrez ID: 56129
• Gene name: Protocadherin beta 7
• Gene symbol: PCDHB7
• Synonyms (NCBI Gene): PCDH-BETA7
• Chromosome: 5
• Chromosome location: 5q31.3
• Summary: This gene is a member of the protocadherin beta gene cluster, one of three related gene clusters tandemly linked on chromosome five. The gene clusters demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters.

miRNA Show/Hide all (36)

miRTarBase ID	miRNA	Experiments	Reference
MIRT1217229	hsa-miR-1202	CLIP-seq
MIRT1217230	hsa-miR-125a-3p	CLIP-seq
MIRT1217231	hsa-miR-130a	CLIP-seq
MIRT1217232	hsa-miR-130b	CLIP-seq
MIRT1217233	hsa-miR-203	CLIP-seq
MIRT1217234	hsa-miR-2682	CLIP-seq
MIRT1217235	hsa-miR-301a	CLIP-seq
MIRT1217236	hsa-miR-301b	CLIP-seq
MIRT1217237	hsa-miR-3134	CLIP-seq
MIRT1217238	hsa-miR-3171	CLIP-seq
MIRT1217239	hsa-miR-3606	CLIP-seq
MIRT1217240	hsa-miR-3666	CLIP-seq
MIRT1217241	hsa-miR-3681	CLIP-seq
MIRT1217242	hsa-miR-3689a-5p	CLIP-seq
MIRT1217243	hsa-miR-3689b	CLIP-seq
MIRT1217244	hsa-miR-3689e	CLIP-seq
MIRT1217245	hsa-miR-3689f	CLIP-seq
MIRT1217246	hsa-miR-3972	CLIP-seq
MIRT1217247	hsa-miR-4279	CLIP-seq
MIRT1217248	hsa-miR-4295	CLIP-seq
MIRT1217249	hsa-miR-4328	CLIP-seq
MIRT1217250	hsa-miR-4423-3p	CLIP-seq
MIRT1217251	hsa-miR-4460	CLIP-seq
MIRT1217252	hsa-miR-4495	CLIP-seq
MIRT1217253	hsa-miR-449c	CLIP-seq
MIRT1217254	hsa-miR-454	CLIP-seq
MIRT1217255	hsa-miR-4671-3p	CLIP-seq
MIRT1217256	hsa-miR-4727-3p	CLIP-seq
MIRT1217257	hsa-miR-4755-3p	CLIP-seq
MIRT1217258	hsa-miR-548u	CLIP-seq
MIRT1217259	hsa-miR-633	CLIP-seq
MIRT1217260	hsa-miR-668	CLIP-seq
MIRT1217261	hsa-miR-921	CLIP-seq
MIRT1217262	hsa-miR-940	CLIP-seq
MIRT2062713	hsa-miR-4753-3p	CLIP-seq
MIRT2392194	hsa-miR-137	CLIP-seq

Gene ontology (GO) Show/Hide all (9)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005509	Function	Calcium ion binding	IEA
GO:0005886	Component	Plasma membrane	IBA
GO:0005886	Component	Plasma membrane	IEA
GO:0007155	Process	Cell adhesion	IBA
GO:0007155	Process	Cell adhesion	IEA
GO:0007156	Process	Homophilic cell adhesion via plasma membrane adhesion molecules	IEA
GO:0007399	Process	Nervous system development	IEA
GO:0016020	Component	Membrane	IEA
GO:0050839	Function	Cell adhesion molecule binding	IBA

Other IDs

• MIM: 606333
• HGNC: 8692
• e!Ensembl: ENSG00000113212

Protein

• UniProt ID: Q9Y5E2
• Protein name: Protocadherin beta-7 (PCDH-beta-7)
• Protein function: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00028	Cadherin	247 → 338	Cadherin domain	Domain
  PF00028	Cadherin	456 → 552	Cadherin domain	Domain
  PF00028	Cadherin	353 → 442	Cadherin domain	Domain
  PF00028	Cadherin	138 → 233	Cadherin domain	Domain
  PF00028	Cadherin	575 → 663	Cadherin domain	Domain
  PF08266	Cadherin_2	30 → 112	Cadherin-like	Domain
  PF16492	Cadherin_C_2	683 → 766	Cadherin cytoplasmic C-terminal	Family

• Sequence:

  MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR
  ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE
  LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI
  NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP
  DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS
  LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS
  PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT
  ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS
  GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA
  LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA
  WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV
  LLVDGFSQPYLRLPEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPV
  GRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGRE
  VEENRPFQNNLGF

• Sequence length: 793

Related Genes

No strongly related genes found yet for PCDHB7.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to PCDHB7.