Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene SNPs Other IDs Associated diseases
Entrez ID	4794
Gene name	NFKB inhibitor epsilon
Gene symbol	NFKBIE
Synonyms (NCBI Gene)	IKBE
Chromosome	6
Chromosome location	6p21.1
Summary	The protein encoded by this gene binds to components of NF-kappa-B, trapping the complex in the cytoplasm and preventing it from activating genes in the nucleus. Phosphorylation of the encoded protein targets it for destruction by the ubiquitin pathway, w

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miRTarBase ID	miRNA	Experiments	Reference
MIRT029491	hsa-miR-26b-5p	Microarray	19088304
MIRT036677	hsa-miR-935	CLASH	23622248
MIRT1183556	hsa-miR-1182	CLIP-seq
MIRT1183557	hsa-miR-1287	CLIP-seq
MIRT1183558	hsa-miR-3135b	CLIP-seq
MIRT1183559	hsa-miR-3154	CLIP-seq
MIRT1183560	hsa-miR-3919	CLIP-seq
MIRT1183561	hsa-miR-409-5p	CLIP-seq
MIRT1183562	hsa-miR-412	CLIP-seq
MIRT1183563	hsa-miR-4292	CLIP-seq
MIRT1183564	hsa-miR-4308	CLIP-seq
MIRT1183565	hsa-miR-4438	CLIP-seq
MIRT1183566	hsa-miR-4470	CLIP-seq
MIRT1183567	hsa-miR-4638-3p	CLIP-seq
MIRT2053221	hsa-miR-942	CLIP-seq
MIRT2282495	hsa-miR-103b	CLIP-seq
MIRT2282496	hsa-miR-1184	CLIP-seq
MIRT2282497	hsa-miR-1185	CLIP-seq
MIRT2282498	hsa-miR-1233	CLIP-seq
MIRT2282499	hsa-miR-125a-5p	CLIP-seq
MIRT2282500	hsa-miR-125b	CLIP-seq
MIRT2282501	hsa-miR-2355-5p	CLIP-seq
MIRT2282502	hsa-miR-296-5p	CLIP-seq
MIRT2282503	hsa-miR-3136-3p	CLIP-seq
MIRT2282504	hsa-miR-3605-5p	CLIP-seq
MIRT2282505	hsa-miR-3679-5p	CLIP-seq
MIRT2282506	hsa-miR-4293	CLIP-seq
MIRT2282507	hsa-miR-4319	CLIP-seq
MIRT2282508	hsa-miR-4418	CLIP-seq
MIRT2282509	hsa-miR-4436b-3p	CLIP-seq
MIRT2282510	hsa-miR-4661-3p	CLIP-seq
MIRT2282511	hsa-miR-4761-3p	CLIP-seq
MIRT2282512	hsa-miR-509-3-5p	CLIP-seq
MIRT2282513	hsa-miR-509-5p	CLIP-seq
MIRT2282514	hsa-miR-544b	CLIP-seq
MIRT2282515	hsa-miR-596	CLIP-seq
MIRT2282516	hsa-miR-661	CLIP-seq
MIRT2455115	hsa-miR-3155	CLIP-seq
MIRT2455116	hsa-miR-3155b	CLIP-seq
MIRT2455117	hsa-miR-3176	CLIP-seq
MIRT2455118	hsa-miR-3922-3p	CLIP-seq
MIRT2455119	hsa-miR-4701-5p	CLIP-seq
MIRT2455120	hsa-miR-484	CLIP-seq
MIRT2455121	hsa-miR-588	CLIP-seq
MIRT2455122	hsa-miR-760	CLIP-seq
MIRT2686247	hsa-miR-1236	CLIP-seq
MIRT2686248	hsa-miR-1470	CLIP-seq
MIRT2686249	hsa-miR-193a-3p	CLIP-seq
MIRT2686250	hsa-miR-193b	CLIP-seq
MIRT2686251	hsa-miR-2114	CLIP-seq
MIRT2686252	hsa-miR-24	CLIP-seq
MIRT2686253	hsa-miR-3064-5p	CLIP-seq
MIRT2455115	hsa-miR-3155	CLIP-seq
MIRT2455116	hsa-miR-3155b	CLIP-seq
MIRT2686254	hsa-miR-3169	CLIP-seq
MIRT2455117	hsa-miR-3176	CLIP-seq
MIRT2686255	hsa-miR-3652	CLIP-seq
MIRT2686256	hsa-miR-3664-3p	CLIP-seq
MIRT2455118	hsa-miR-3922-3p	CLIP-seq
MIRT2686257	hsa-miR-4274	CLIP-seq
MIRT2686258	hsa-miR-4430	CLIP-seq
MIRT2686259	hsa-miR-4436a	CLIP-seq
MIRT2686260	hsa-miR-4436b-5p	CLIP-seq
MIRT2686261	hsa-miR-4505	CLIP-seq
MIRT2686262	hsa-miR-4638-5p	CLIP-seq
MIRT2686263	hsa-miR-4667-3p	CLIP-seq
MIRT2455119	hsa-miR-4701-5p	CLIP-seq
MIRT2455120	hsa-miR-484	CLIP-seq
MIRT2455121	hsa-miR-588	CLIP-seq
MIRT2455122	hsa-miR-760	CLIP-seq
MIRT2686264	hsa-miR-892b	CLIP-seq

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GO ID	Ontology	Definition	Evidence	Reference
GO:0001650	Component	Fibrillar center	IDA
GO:0005515	Function	Protein binding	IPI	14743216, 16769727, 21988832, 28514442, 33961781, 35271311, 37643469
GO:0005654	Component	Nucleoplasm	IDA
GO:0005737	Component	Cytoplasm	IBA
GO:0005737	Component	Cytoplasm	IDA	9135156
GO:0005737	Component	Cytoplasm	IEA
GO:0005829	Component	Cytosol	IDA
GO:0005829	Component	Cytosol	TAS
GO:0140311	Function	Protein sequestering activity	IDA	9135156

MIM	HGNC	e!Ensembl
604548	7799	ENSG00000146232

O00221

Protein name

NF-kappa-B inhibitor epsilon (NF-kappa-BIE) (I-kappa-B-epsilon) (IkB-E) (IkB-epsilon) (IkappaBepsilon)

Protein function

Sequesters NF-kappa-B transcription factor complexes in the cytoplasm, thereby inhibiting their activity (PubMed:9315679). Sequestered complexes include NFKB1-RELA (p50-p65) and NFKB1-REL (p50-c-Rel) complexes (PubMed:9135156, PubMed:9315679). L

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00023	Ank	403 → 434	Ankyrin repeat	Repeat

Tissue specificity

TISSUE SPECIFICITY: Highly expressed in spleen, testis and lung, followed by kidney, pancreas, heart, placenta and brain. Also expressed in granulocytes and macrophages.

Sequence

MNQRRSESRPGNHRLQAYAEPGKGDSGGAGPLSGSARRGRGGGGAIRVRRPCWSGGAGRG
GGPAWAVRLPTVTAGWTWPALRTLSSLRAGPSEPHSPGRRPPRAGRPLCQADPQPGKAAR
RSLEPDPAQTGPRPARAAGMSEARKGPDEAEESQYDSGIESLRSLRSLPESTSAPASGPS
DGSPQPCTHPPGPVKEPQEKEDADGERADSTYGSSSLTYTLSLLGGPEAEDPAPRLPLPH
VGALSPQQLEALTYISEDGDTLVHLAVIHEAPAVLLCCLALLPQEVLDIQNNLYQTALHL
AVHLDQPGAVRALVLKGASRALQDRHGDTALHVACQRQHLACARCLLEGRPEPGRGTSHS
LDLQLQNWQGLACLHIATLQKNQPLMELLLRNGADIDVQEGTSGKTALHLAVETQERGLV
QFLLQAGAQVDARMLNGCTPLHLAAGRGLMGISSTLCKAGADSLLRNVEDETPQDLTEES
LVLLPFDDLKISGKLLLCTD

Sequence length

500

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (4)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
ARTHRITIS, RHEUMATOID	—	CTD	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
LIVER CIRRHOSIS, EXPERIMENTAL	—	CTD	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
MELANOMA	—	CTD	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
RHEUMATOID ARTHRITIS	—	Disgenet, GWAS catalog Disgenet, GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (24)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Adult Hodgkin Lymphoma	Hodgkin Lymphoma	BEFREE	27670424		★★★★★ ★☆☆☆☆ Found in Text Mining only
Arthritis Rheumatoid	Rheumatoid arthritis	Pubtator	23028356, 23577190, 26587663, 26686423	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
B-Cell Lymphomas	B-Cell Lymphoma	BEFREE	25987724, 27670424		★★★★★ ★☆☆☆☆ Found in Text Mining only
Chronic Lymphocytic Leukemia	Lymphocytic Leukemia	CGI_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Graves Disease	Graves disease	Pubtator	35720300	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Hodgkin Disease	Hodgkin Disease	BEFREE	27670424		★★★★★ ★☆☆☆☆ Found in Text Mining only
Hodgkin Disease	Hodgkin disease	Pubtator	27670424, 32079702	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Lupus Erythematosus Systemic	Systemic lupus erythematosus	Pubtator	26686423	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Lymphoma	Lymphoma	Pubtator	27670424	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Lymphoma, Follicular	Lymphoma	BEFREE	27670424		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant Neoplasms	Malignant Neoplasm	BEFREE	27670424, 29857068		★★★★★ ★☆☆☆☆ Found in Text Mining only
Mediastinal (Thymic) Large B-Cell Lymphoma	B-Cell Lymphoma	BEFREE	27670424		★★★★★ ★☆☆☆☆ Found in Text Mining only
melanoma	Melanoma	CTD_human_DG	26343386		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Melanoma	Melanoma	Pubtator	26343386	Associate	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Neoplasms	Neoplasms	BEFREE	27670424		★★★★★ ★☆☆☆☆ Found in Text Mining only
Osteosarcoma	Osteosarcoma	Pubtator	15298715	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Periodontitis	Periodontitis	Pubtator	24631628	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Precursor T-Cell Lymphoblastic Leukemia-Lymphoma	Lymphoblastic Leukemia	BEFREE	27670424		★★★★★ ★☆☆☆☆ Found in Text Mining only
Primary central nervous system lymphoma	Central Nervous System Lymphoma	BEFREE	27670424		★★★★★ ★☆☆☆☆ Found in Text Mining only
Rheumatoid Arthritis	Rheumatoid arthritis	CTD_human_DG	22446963		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Rheumatoid Arthritis	Rheumatoid arthritis	GWASCAT_DG	22446963, 23028356		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Rheumatoid Arthritis	Rheumatoid arthritis	GWASDB_DG	22446963, 23028356		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Rheumatoid Arthritis	Rheumatoid arthritis	BEFREE	23028356, 26587663		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Sjogren's Syndrome	Sjogren syndrome	Pubtator	26686423	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only

NFKBIE (NFKB inhibitor epsilon)