LYSMD1 (LysM domain containing 1)

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Gene miRNA Gene ontology Other IDs Protein Related genes Diseases linked via similar genes

Gene

• Entrez ID: 388695
• Gene name: LysM domain containing 1
• Gene symbol: LYSMD1
• Synonyms (NCBI Gene): SB145
• Chromosome: 1
• Chromosome location: 1q21.3

miRNA Show/Hide all (219)

miRTarBase ID	miRNA	Experiments	Reference
MIRT019386	hsa-miR-148b-3p	Microarray	17612493
MIRT024173	hsa-miR-221-3p	Sequencing	20371350
MIRT025999	hsa-miR-148a-3p	Sequencing	20371350
MIRT1124020	hsa-miR-1283	CLIP-seq
MIRT1124021	hsa-miR-148a	CLIP-seq
MIRT1124022	hsa-miR-148b	CLIP-seq
MIRT1124023	hsa-miR-152	CLIP-seq
MIRT1124024	hsa-miR-2110	CLIP-seq
MIRT1124025	hsa-miR-221	CLIP-seq
MIRT1124026	hsa-miR-222	CLIP-seq
MIRT1124027	hsa-miR-3074-3p	CLIP-seq
MIRT1124028	hsa-miR-3152-5p	CLIP-seq
MIRT1124029	hsa-miR-3153	CLIP-seq
MIRT1124030	hsa-miR-4271	CLIP-seq
MIRT1124031	hsa-miR-4417	CLIP-seq
MIRT1124032	hsa-miR-4725-3p	CLIP-seq
MIRT1124033	hsa-miR-4761-5p	CLIP-seq
MIRT1124034	hsa-miR-4793-5p	CLIP-seq
MIRT1124035	hsa-miR-4796-3p	CLIP-seq
MIRT1124036	hsa-miR-491-5p	CLIP-seq
MIRT1124037	hsa-miR-541	CLIP-seq
MIRT1124038	hsa-miR-548v	CLIP-seq
MIRT1124039	hsa-miR-624	CLIP-seq
MIRT1124040	hsa-miR-654-5p	CLIP-seq
MIRT1124041	hsa-miR-1827	CLIP-seq
MIRT1124042	hsa-miR-1913	CLIP-seq
MIRT1124043	hsa-miR-204	CLIP-seq
MIRT1124044	hsa-miR-211	CLIP-seq
MIRT1124045	hsa-miR-3144-3p	CLIP-seq
MIRT1124046	hsa-miR-324-3p	CLIP-seq
MIRT1124047	hsa-miR-374a	CLIP-seq
MIRT1124048	hsa-miR-374b	CLIP-seq
MIRT1124049	hsa-miR-4267	CLIP-seq
MIRT1124050	hsa-miR-4755-5p	CLIP-seq
MIRT1124051	hsa-miR-548a-3p	CLIP-seq
MIRT1124052	hsa-miR-548e	CLIP-seq
MIRT1124053	hsa-miR-548f	CLIP-seq
MIRT1124054	hsa-miR-556-3p	CLIP-seq
MIRT1124055	hsa-miR-587	CLIP-seq
MIRT1124056	hsa-miR-623	CLIP-seq
MIRT1124057	hsa-miR-875-5p	CLIP-seq
MIRT1124058	hsa-miR-885-5p	CLIP-seq
MIRT2035075	hsa-miR-1270	CLIP-seq
MIRT2035076	hsa-miR-143	CLIP-seq
MIRT2035077	hsa-miR-3155	CLIP-seq
MIRT2035078	hsa-miR-3155b	CLIP-seq
MIRT2035079	hsa-miR-3184	CLIP-seq
MIRT2035080	hsa-miR-3185	CLIP-seq
MIRT2035081	hsa-miR-3915	CLIP-seq
MIRT2035082	hsa-miR-3928	CLIP-seq
MIRT2035083	hsa-miR-423-5p	CLIP-seq
MIRT2035084	hsa-miR-4259	CLIP-seq
MIRT2035085	hsa-miR-4268	CLIP-seq
MIRT2035086	hsa-miR-4294	CLIP-seq
MIRT2035087	hsa-miR-4531	CLIP-seq
MIRT2035088	hsa-miR-4683	CLIP-seq
MIRT2035089	hsa-miR-4715-5p	CLIP-seq
MIRT2035090	hsa-miR-4716-3p	CLIP-seq
MIRT2035091	hsa-miR-4723-5p	CLIP-seq
MIRT2035092	hsa-miR-4753-5p	CLIP-seq
MIRT2035093	hsa-miR-4770	CLIP-seq
MIRT2035094	hsa-miR-484	CLIP-seq
MIRT2035095	hsa-miR-593	CLIP-seq
MIRT2035096	hsa-miR-620	CLIP-seq
MIRT2265499	hsa-miR-1271	CLIP-seq
MIRT2265500	hsa-miR-139-5p	CLIP-seq
MIRT2265501	hsa-miR-182	CLIP-seq
MIRT1124041	hsa-miR-1827	CLIP-seq
MIRT1124042	hsa-miR-1913	CLIP-seq
MIRT2265502	hsa-miR-1972	CLIP-seq
MIRT2265503	hsa-miR-3162-3p	CLIP-seq
MIRT2265504	hsa-miR-3166	CLIP-seq
MIRT2265505	hsa-miR-3173-3p	CLIP-seq
MIRT2265506	hsa-miR-3189-5p	CLIP-seq
MIRT1124046	hsa-miR-324-3p	CLIP-seq
MIRT2265507	hsa-miR-4499	CLIP-seq
MIRT2265508	hsa-miR-4505	CLIP-seq
MIRT2265509	hsa-miR-4649-3p	CLIP-seq
MIRT2265510	hsa-miR-4695-5p	CLIP-seq
MIRT2265511	hsa-miR-4731-5p	CLIP-seq
MIRT2265512	hsa-miR-4758-3p	CLIP-seq
MIRT2265513	hsa-miR-485-5p	CLIP-seq
MIRT2265514	hsa-miR-512-3p	CLIP-seq
MIRT1124051	hsa-miR-548a-3p	CLIP-seq
MIRT1124052	hsa-miR-548e	CLIP-seq
MIRT1124053	hsa-miR-548f	CLIP-seq
MIRT1124055	hsa-miR-587	CLIP-seq
MIRT2265515	hsa-miR-96	CLIP-seq
MIRT2564764	hsa-miR-3682-5p	CLIP-seq
MIRT2564765	hsa-miR-1182	CLIP-seq
MIRT2564766	hsa-miR-1225-3p	CLIP-seq
MIRT2564767	hsa-miR-1233	CLIP-seq
MIRT2564768	hsa-miR-1248	CLIP-seq
MIRT1124020	hsa-miR-1283	CLIP-seq
MIRT2265500	hsa-miR-139-5p	CLIP-seq
MIRT2564769	hsa-miR-140-3p	CLIP-seq
MIRT1124021	hsa-miR-148a	CLIP-seq
MIRT1124022	hsa-miR-148b	CLIP-seq
MIRT1124023	hsa-miR-152	CLIP-seq
MIRT1124041	hsa-miR-1827	CLIP-seq
MIRT2564770	hsa-miR-185	CLIP-seq
MIRT2564771	hsa-miR-188-3p	CLIP-seq
MIRT2564772	hsa-miR-197	CLIP-seq
MIRT1124043	hsa-miR-204	CLIP-seq
MIRT1124044	hsa-miR-211	CLIP-seq
MIRT1124025	hsa-miR-221	CLIP-seq
MIRT1124026	hsa-miR-222	CLIP-seq
MIRT2564773	hsa-miR-3140-3p	CLIP-seq
MIRT2564774	hsa-miR-3150b-3p	CLIP-seq
MIRT2564775	hsa-miR-3154	CLIP-seq
MIRT2265503	hsa-miR-3162-3p	CLIP-seq
MIRT2564776	hsa-miR-3182	CLIP-seq
MIRT2564777	hsa-miR-3529	CLIP-seq
MIRT2564778	hsa-miR-3545-3p	CLIP-seq
MIRT2564779	hsa-miR-3614-3p	CLIP-seq
MIRT2564780	hsa-miR-3653	CLIP-seq
MIRT2564781	hsa-miR-3658	CLIP-seq
MIRT2564764	hsa-miR-3682-5p	CLIP-seq
MIRT2564782	hsa-miR-379	CLIP-seq
MIRT2564783	hsa-miR-3910	CLIP-seq
MIRT2564784	hsa-miR-3929	CLIP-seq
MIRT2564785	hsa-miR-3976	CLIP-seq
MIRT2564786	hsa-miR-421	CLIP-seq
MIRT2564787	hsa-miR-4272	CLIP-seq
MIRT2564788	hsa-miR-4306	CLIP-seq
MIRT2564789	hsa-miR-4419b	CLIP-seq
MIRT2564790	hsa-miR-4438	CLIP-seq
MIRT2564791	hsa-miR-4451	CLIP-seq
MIRT2564792	hsa-miR-4468	CLIP-seq
MIRT2564793	hsa-miR-4476	CLIP-seq
MIRT2564794	hsa-miR-4478	CLIP-seq
MIRT2564795	hsa-miR-4644	CLIP-seq
MIRT2564796	hsa-miR-4650-3p	CLIP-seq
MIRT2564797	hsa-miR-4652-3p	CLIP-seq
MIRT2564798	hsa-miR-4663	CLIP-seq
MIRT2564799	hsa-miR-4689	CLIP-seq
MIRT2564800	hsa-miR-4709-5p	CLIP-seq
MIRT1124050	hsa-miR-4755-5p	CLIP-seq
MIRT2564801	hsa-miR-4773	CLIP-seq
MIRT2564802	hsa-miR-4778-3p	CLIP-seq
MIRT2564803	hsa-miR-4784	CLIP-seq
MIRT2265514	hsa-miR-512-3p	CLIP-seq
MIRT2564804	hsa-miR-516a-3p	CLIP-seq
MIRT2564805	hsa-miR-516b	CLIP-seq
MIRT1124038	hsa-miR-548v	CLIP-seq
MIRT1124054	hsa-miR-556-3p	CLIP-seq
MIRT2564806	hsa-miR-582-3p	CLIP-seq
MIRT1124055	hsa-miR-587	CLIP-seq
MIRT1124056	hsa-miR-623	CLIP-seq
MIRT1124058	hsa-miR-885-5p	CLIP-seq
MIRT2564807	hsa-miR-892b	CLIP-seq
MIRT2564765	hsa-miR-1182	CLIP-seq
MIRT2684380	hsa-miR-1208	CLIP-seq
MIRT2564766	hsa-miR-1225-3p	CLIP-seq
MIRT2564767	hsa-miR-1233	CLIP-seq
MIRT2564768	hsa-miR-1248	CLIP-seq
MIRT1124020	hsa-miR-1283	CLIP-seq
MIRT2265500	hsa-miR-139-5p	CLIP-seq
MIRT2564769	hsa-miR-140-3p	CLIP-seq
MIRT1124021	hsa-miR-148a	CLIP-seq
MIRT1124022	hsa-miR-148b	CLIP-seq
MIRT1124023	hsa-miR-152	CLIP-seq
MIRT1124041	hsa-miR-1827	CLIP-seq
MIRT2564770	hsa-miR-185	CLIP-seq
MIRT2564771	hsa-miR-188-3p	CLIP-seq
MIRT2684381	hsa-miR-1915	CLIP-seq
MIRT2564772	hsa-miR-197	CLIP-seq
MIRT1124043	hsa-miR-204	CLIP-seq
MIRT1124044	hsa-miR-211	CLIP-seq
MIRT1124025	hsa-miR-221	CLIP-seq
MIRT1124026	hsa-miR-222	CLIP-seq
MIRT2564773	hsa-miR-3140-3p	CLIP-seq
MIRT2564774	hsa-miR-3150b-3p	CLIP-seq
MIRT2564775	hsa-miR-3154	CLIP-seq
MIRT2265503	hsa-miR-3162-3p	CLIP-seq
MIRT2564776	hsa-miR-3182	CLIP-seq
MIRT2564777	hsa-miR-3529	CLIP-seq
MIRT2564778	hsa-miR-3545-3p	CLIP-seq
MIRT2564779	hsa-miR-3614-3p	CLIP-seq
MIRT2564780	hsa-miR-3653	CLIP-seq
MIRT2564781	hsa-miR-3658	CLIP-seq
MIRT2564764	hsa-miR-3682-5p	CLIP-seq
MIRT2564782	hsa-miR-379	CLIP-seq
MIRT2564783	hsa-miR-3910	CLIP-seq
MIRT2564784	hsa-miR-3929	CLIP-seq
MIRT2564785	hsa-miR-3976	CLIP-seq
MIRT2564786	hsa-miR-421	CLIP-seq
MIRT2564787	hsa-miR-4272	CLIP-seq
MIRT2684382	hsa-miR-4279	CLIP-seq
MIRT2564788	hsa-miR-4306	CLIP-seq
MIRT2684383	hsa-miR-4330	CLIP-seq
MIRT2564789	hsa-miR-4419b	CLIP-seq
MIRT2564790	hsa-miR-4438	CLIP-seq
MIRT2564791	hsa-miR-4451	CLIP-seq
MIRT2564792	hsa-miR-4468	CLIP-seq
MIRT2564793	hsa-miR-4476	CLIP-seq
MIRT2564794	hsa-miR-4478	CLIP-seq
MIRT2684384	hsa-miR-4532	CLIP-seq
MIRT2564795	hsa-miR-4644	CLIP-seq
MIRT2564796	hsa-miR-4650-3p	CLIP-seq
MIRT2564797	hsa-miR-4652-3p	CLIP-seq
MIRT2564798	hsa-miR-4663	CLIP-seq
MIRT2684385	hsa-miR-4685-5p	CLIP-seq
MIRT2564799	hsa-miR-4689	CLIP-seq
MIRT2564800	hsa-miR-4709-5p	CLIP-seq
MIRT1124050	hsa-miR-4755-5p	CLIP-seq
MIRT2564801	hsa-miR-4773	CLIP-seq
MIRT2564802	hsa-miR-4778-3p	CLIP-seq
MIRT2564803	hsa-miR-4784	CLIP-seq
MIRT2265514	hsa-miR-512-3p	CLIP-seq
MIRT2564804	hsa-miR-516a-3p	CLIP-seq
MIRT2564805	hsa-miR-516b	CLIP-seq
MIRT1124038	hsa-miR-548v	CLIP-seq
MIRT1124054	hsa-miR-556-3p	CLIP-seq
MIRT2564806	hsa-miR-582-3p	CLIP-seq
MIRT1124055	hsa-miR-587	CLIP-seq
MIRT1124056	hsa-miR-623	CLIP-seq
MIRT1124058	hsa-miR-885-5p	CLIP-seq
MIRT2564807	hsa-miR-892b	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	25416956, 32296183
GO:0005654	Component	Nucleoplasm	IDA

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q96S90
• Protein name: LysM and putative peptidoglycan-binding domain-containing protein 1
• PDB: 2DJP
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF01476	LysM	42 → 85	LysM domain	Domain

• Sequence:

  MASPSRQPPPGGSGLLQGSRARSYGSLVQSACSPVRERRLEHQLEPGDTLAGLALKYGVT
  MEQIKRANRLYTNDSIFLKKTLYIPILTEPRDLFNGLDSEEEKDGEEKVHPSNSEVWPHS
  TERKKQETGAGRANGEVLPTPGQETPTPIHDLSASDFLKKLDSQISLSKKAAAQKLKKGE
  NGVPGEDAGLHLSSPWMQQRAVLGPVPLTRTSRTRTLRDQEDEIFKL

• Sequence length: 227

Related Genes

No strongly related genes found yet for LYSMD1.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to LYSMD1.