IGSF9 (immunoglobulin superfamily member 9)

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Gene miRNA Gene ontology Other IDs Protein Diseases linked via similar genes

Gene

• Entrez ID: 57549
• Gene name: Immunoglobulin superfamily member 9
• Gene symbol: IGSF9
• Synonyms (NCBI Gene): FP18798, IGSF9A, Nrt1
• Chromosome: 1
• Chromosome location: 1q23.2

miRNA Show/Hide all (51)

miRTarBase ID	miRNA	Experiments	Reference
MIRT663219	hsa-miR-8485	HITS-CLIP	23824327
MIRT663218	hsa-miR-377-3p	HITS-CLIP	23824327
MIRT499326	hsa-miR-6758-5p	PAR-CLIP	24398324
MIRT499325	hsa-miR-6856-5p	PAR-CLIP	24398324
MIRT499324	hsa-miR-1910-3p	PAR-CLIP	24398324
MIRT499323	hsa-miR-6511a-5p	PAR-CLIP	24398324
MIRT499321	hsa-miR-1827	PAR-CLIP	24398324
MIRT499321	hsa-miR-1827	PAR-CLIP	27292025
MIRT499321	hsa-miR-1827	PAR-CLIP	27292025
MIRT499324	hsa-miR-1910-3p	PAR-CLIP	27292025
MIRT499324	hsa-miR-1910-3p	PAR-CLIP	27292025
MIRT499323	hsa-miR-6511a-5p	PAR-CLIP	27292025
MIRT499323	hsa-miR-6511a-5p	PAR-CLIP	27292025
MIRT499326	hsa-miR-6758-5p	PAR-CLIP	27292025
MIRT499326	hsa-miR-6758-5p	PAR-CLIP	27292025
MIRT499325	hsa-miR-6856-5p	PAR-CLIP	27292025
MIRT499325	hsa-miR-6856-5p	PAR-CLIP	27292025
MIRT499321	hsa-miR-1827	HITS-CLIP	27418678
MIRT499324	hsa-miR-1910-3p	HITS-CLIP	27418678
MIRT663218	hsa-miR-377-3p	HITS-CLIP	27418678
MIRT663218	hsa-miR-377-3p	HITS-CLIP	27418678
MIRT663218	hsa-miR-377-3p	HITS-CLIP	27418678
MIRT663218	hsa-miR-377-3p	HITS-CLIP	27418678
MIRT663218	hsa-miR-377-3p	HITS-CLIP	27418678
MIRT663218	hsa-miR-377-3p	HITS-CLIP	27418678
MIRT499323	hsa-miR-6511a-5p	HITS-CLIP	27418678
MIRT499326	hsa-miR-6758-5p	HITS-CLIP	27418678
MIRT499325	hsa-miR-6856-5p	HITS-CLIP	27418678
MIRT663219	hsa-miR-8485	HITS-CLIP	27418678
MIRT663219	hsa-miR-8485	HITS-CLIP	27418678
MIRT663219	hsa-miR-8485	HITS-CLIP	27418678
MIRT663219	hsa-miR-8485	HITS-CLIP	27418678
MIRT663219	hsa-miR-8485	HITS-CLIP	27418678
MIRT663219	hsa-miR-8485	HITS-CLIP	27418678
MIRT663219	hsa-miR-8485	HITS-CLIP	23824327
MIRT663218	hsa-miR-377-3p	HITS-CLIP	23824327
MIRT499326	hsa-miR-6758-5p	PAR-CLIP	24398324
MIRT499325	hsa-miR-6856-5p	PAR-CLIP	24398324
MIRT499324	hsa-miR-1910-3p	PAR-CLIP	24398324
MIRT499323	hsa-miR-6511a-5p	PAR-CLIP	24398324
MIRT499321	hsa-miR-1827	PAR-CLIP	24398324
MIRT1062818	hsa-miR-377	CLIP-seq
MIRT2247139	hsa-miR-27a	CLIP-seq
MIRT2247140	hsa-miR-27b	CLIP-seq
MIRT1062818	hsa-miR-377	CLIP-seq
MIRT2247141	hsa-miR-4270	CLIP-seq
MIRT2247142	hsa-miR-4441	CLIP-seq
MIRT2247143	hsa-miR-4633-5p	CLIP-seq
MIRT2247144	hsa-miR-5096	CLIP-seq
MIRT2247145	hsa-miR-513a-5p	CLIP-seq
MIRT2247146	hsa-miR-532-5p	CLIP-seq

Gene ontology (GO) Show/Hide all (23)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	32296183
GO:0005886	Component	Plasma membrane	IBA
GO:0005886	Component	Plasma membrane	IEA
GO:0007156	Process	Homophilic cell adhesion via plasma membrane adhesion molecules	IBA
GO:0007156	Process	Homophilic cell adhesion via plasma membrane adhesion molecules	IEA
GO:0007399	Process	Nervous system development	IEA
GO:0007411	Process	Axon guidance	IBA
GO:0016020	Component	Membrane	IEA
GO:0016358	Process	Dendrite development	IEA
GO:0030154	Process	Cell differentiation	IEA
GO:0030424	Component	Axon	IBA
GO:0030424	Component	Axon	IEA
GO:0030425	Component	Dendrite	IEA
GO:0045202	Component	Synapse	IEA
GO:0050807	Process	Regulation of synapse organization	IEA
GO:0050807	Process	Regulation of synapse organization	IEA
GO:0060077	Component	Inhibitory synapse	IEA
GO:0070593	Process	Dendrite self-avoidance	IBA
GO:0090128	Process	Regulation of synapse maturation	IEA
GO:0098632	Function	Cell-cell adhesion mediator activity	IBA
GO:0098632	Function	Cell-cell adhesion mediator activity	IEA
GO:0098839	Component	Postsynaptic density membrane	IEA
GO:0098978	Component	Glutamatergic synapse	IEA

Other IDs

• MIM: 609738
• HGNC: 18132
• e!Ensembl: ENSG00000085552

Protein

• UniProt ID: Q9P2J2
• Protein name: Protein turtle homolog A (Immunoglobulin superfamily member 9A) (IgSF9A)
• Protein function: Functions in dendrite outgrowth and synapse maturation.
• PDB: 1V5J
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00041	fn3	509 → 596	Fibronectin type III domain	Domain
  PF00041	fn3	625 → 708	Fibronectin type III domain	Domain
  PF07679	I-set	136 → 223	Immunoglobulin I-set domain	Domain
  PF13927	Ig_3	226 → 305		Domain
  PF13927	Ig_3	417 → 490		Domain

• Sequence:

  MVWCLGLAVLSLVISQGADGRGKPEVVSVVGRAGESVVLGCDLLPPAGRPPLHVIEWLRF
  GFLLPIFIQFGLYSPRIDPDYVGRVRLQKGASLQIEGLRVEDQGWYECRVFFLDQHIPED
  DFANGSWVHLTVNSPPQFQETPPAVLEVQELEPVTLRCVARGSPLPHVTWKLRGKDLGQG
  QGQVQVQNGTLRIRRVERGSSGVYTCQASSTEGSATHATQLLVLGPPVIVVPPKNSTVNA
  SQDVSLACHAEAYPANLTYSWFQDNINVFHISRLQPRVRILVDGSLRLLATQPDDAGCYT
  CVPSNGLLHPPSASAYLTVLYPAQVTAMPPETPLPIGMPGVIRCPVRANPPLLFVSWTKD
  GKALQLDKFPGWSQGTEGSLIIALGNEDALGEYSCTPYNSLGTAGPSPVTRVLLKAPPAF
  IERPKEEYFQEVGRELLIPCSAQGDPPPVVSWTKVGRGLQGQAQVDSNSSLILRPLTKEA
  HGHWECSASNAVARVATSTNVYVLGTSPHVVTNVSVVALPKGANVSWEPGFDGGYLQRFS
  VWYTPLAKRPDRMHHDWVSLAVPVGAAHLLVPGLQPHTQYQFSVLAQNKLGSGPFSEIVL
  SAPEGLPTTPAAPGLPPTEIPPPLSPPRGLVAVRTPRGVLLHWDPPELVPKRLDGYVLEG
  RQGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLEV
  YPSRTQLPGLLPQPVLAGVVGGVCFLGVAVLVSILAGCLLNRRRAARRRRKRLRQDPPLI
  FSPTGKSAAPSALGSGSPDSVAKLKLQGSPVPSLRQSLLWGDPAGTPSPHPDPPSSRGPL
  PLEPICRGPDGRFVMGPTVAAPQERSGREQAEPRTPAQRLARSFDCSSSSPSGAPQPLCI
  EDISPVAPPPAAPPSPLPGPGPLLQYLSLPFFREMNVDGDWPPLEEPSPAAPPDYMDTRR
  CPTSSFLRSPETPPVSPRESLPGAVVGAGATAEPPYTALADWTLRERLLPGLLPAAPRGS
  LTSQSSGRGSASFLRPPSTAPSAGGSYLSPAPGDTSSWASGPERWPRREHVVTVSKRRNT
  SVDENYEWDSEFPGDMELLETLHLGLASSRLRPEAEPELGVKTPEEGCLLNTAHVTGPEA
  RCAALREEFLAFRRRRDATRARLPAYRQPVPHPEQATLL

• Sequence length: 1179

Related Genes

No strongly related genes found yet for IGSF9.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to IGSF9.