CLDND1 (claudin domain containing 1)

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Gene miRNA Gene ontology Other IDs Protein Related genes Diseases linked via similar genes

Gene

• Entrez ID: 56650
• Gene name: Claudin domain containing 1
• Gene symbol: CLDND1
• Synonyms (NCBI Gene): C3orf4, CLDN-25, GENX-3745, Z38
• Chromosome: 3
• Chromosome location: 3q11.2|3q12.1

miRNA Show/Hide all (242)

miRTarBase ID	miRNA	Experiments	Reference
MIRT004926	hsa-miR-124-3p	Microarray	15685193
MIRT004926	hsa-miR-124-3p	Microarray	18668037
MIRT004926	hsa-miR-124-3p	Microarray	15685193
MIRT049185	hsa-miR-92a-3p	CLASH	23622248
MIRT723111	hsa-miR-141-3p	HITS-CLIP	19536157
MIRT723110	hsa-miR-200a-3p	HITS-CLIP	19536157
MIRT723109	hsa-miR-4742-3p	HITS-CLIP	19536157
MIRT355792	hsa-miR-5096	HITS-CLIP	19536157
MIRT723108	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT574009	hsa-miR-1178-5p	PAR-CLIP	20371350
MIRT308671	hsa-miR-4528	PAR-CLIP	20371350
MIRT574008	hsa-miR-4267	PAR-CLIP	20371350
MIRT574007	hsa-miR-518c-5p	PAR-CLIP	20371350
MIRT574006	hsa-miR-1249-5p	PAR-CLIP	20371350
MIRT574005	hsa-miR-6797-5p	PAR-CLIP	20371350
MIRT574004	hsa-miR-516b-5p	PAR-CLIP	20371350
MIRT574003	hsa-miR-6515-5p	PAR-CLIP	20371350
MIRT488904	hsa-miR-3617-5p	PAR-CLIP	23592263
MIRT488903	hsa-miR-641	PAR-CLIP	23592263
MIRT488902	hsa-miR-154-5p	PAR-CLIP	23592263
MIRT488900	hsa-miR-5579-5p	PAR-CLIP	23592263
MIRT488901	hsa-miR-4670-3p	PAR-CLIP	23592263
MIRT488899	hsa-miR-655-5p	PAR-CLIP	23592263
MIRT488898	hsa-miR-377-5p	PAR-CLIP	23592263
MIRT488897	hsa-miR-6086	PAR-CLIP	23592263
MIRT488896	hsa-miR-584-5p	PAR-CLIP	23592263
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT004926	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT723111	hsa-miR-141-3p	HITS-CLIP	19536157
MIRT723110	hsa-miR-200a-3p	HITS-CLIP	19536157
MIRT723109	hsa-miR-4742-3p	HITS-CLIP	19536157
MIRT355792	hsa-miR-5096	HITS-CLIP	19536157
MIRT723108	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT574009	hsa-miR-1178-5p	PAR-CLIP	20371350
MIRT308671	hsa-miR-4528	PAR-CLIP	20371350
MIRT574008	hsa-miR-4267	PAR-CLIP	20371350
MIRT574007	hsa-miR-518c-5p	PAR-CLIP	20371350
MIRT574006	hsa-miR-1249-5p	PAR-CLIP	20371350
MIRT574005	hsa-miR-6797-5p	PAR-CLIP	20371350
MIRT574004	hsa-miR-516b-5p	PAR-CLIP	20371350
MIRT574003	hsa-miR-6515-5p	PAR-CLIP	20371350
MIRT488904	hsa-miR-3617-5p	PAR-CLIP	23592263
MIRT488903	hsa-miR-641	PAR-CLIP	23592263
MIRT488902	hsa-miR-154-5p	PAR-CLIP	23592263
MIRT488900	hsa-miR-5579-5p	PAR-CLIP	23592263
MIRT488901	hsa-miR-4670-3p	PAR-CLIP	23592263
MIRT488899	hsa-miR-655-5p	PAR-CLIP	23592263
MIRT488898	hsa-miR-377-5p	PAR-CLIP	23592263
MIRT488897	hsa-miR-6086	PAR-CLIP	23592263
MIRT488896	hsa-miR-584-5p	PAR-CLIP	23592263
MIRT895572	hsa-miR-561	CLIP-seq
MIRT895573	hsa-miR-142-5p	CLIP-seq
MIRT895574	hsa-miR-2052	CLIP-seq
MIRT895575	hsa-miR-3129-3p	CLIP-seq
MIRT895576	hsa-miR-3976	CLIP-seq
MIRT895577	hsa-miR-4712-3p	CLIP-seq
MIRT895578	hsa-miR-4803	CLIP-seq
MIRT895572	hsa-miR-561	CLIP-seq
MIRT895579	hsa-miR-101	CLIP-seq
MIRT895580	hsa-miR-124	CLIP-seq
MIRT895581	hsa-miR-139-5p	CLIP-seq
MIRT895582	hsa-miR-144	CLIP-seq
MIRT895583	hsa-miR-199a-3p	CLIP-seq
MIRT895584	hsa-miR-199b-3p	CLIP-seq
MIRT895585	hsa-miR-221	CLIP-seq
MIRT895586	hsa-miR-222	CLIP-seq
MIRT895587	hsa-miR-302f	CLIP-seq
MIRT895588	hsa-miR-3129-5p	CLIP-seq
MIRT895589	hsa-miR-3136-5p	CLIP-seq
MIRT895590	hsa-miR-3202	CLIP-seq
MIRT895591	hsa-miR-329	CLIP-seq
MIRT895592	hsa-miR-3617	CLIP-seq
MIRT895593	hsa-miR-362-3p	CLIP-seq
MIRT895594	hsa-miR-3681	CLIP-seq
MIRT895595	hsa-miR-3941	CLIP-seq
MIRT895596	hsa-miR-409-3p	CLIP-seq
MIRT895597	hsa-miR-4439	CLIP-seq
MIRT895598	hsa-miR-4476	CLIP-seq
MIRT895599	hsa-miR-4513	CLIP-seq
MIRT895600	hsa-miR-4680-3p	CLIP-seq
MIRT895601	hsa-miR-4733-3p	CLIP-seq
MIRT895602	hsa-miR-506	CLIP-seq
MIRT895603	hsa-miR-548v	CLIP-seq
MIRT895604	hsa-miR-603	CLIP-seq
MIRT1965533	hsa-miR-1278	CLIP-seq
MIRT1965534	hsa-miR-1587	CLIP-seq
MIRT1965535	hsa-miR-3652	CLIP-seq
MIRT1965536	hsa-miR-378g	CLIP-seq
MIRT1965537	hsa-miR-4430	CLIP-seq
MIRT1965538	hsa-miR-4492	CLIP-seq
MIRT1965539	hsa-miR-4498	CLIP-seq
MIRT1965540	hsa-miR-4656	CLIP-seq
MIRT1965541	hsa-miR-4675	CLIP-seq
MIRT1965542	hsa-miR-4741	CLIP-seq
MIRT1965543	hsa-miR-762	CLIP-seq
MIRT2386161	hsa-miR-1229	CLIP-seq
MIRT2386162	hsa-miR-1245b-3p	CLIP-seq
MIRT2386163	hsa-miR-127-5p	CLIP-seq
MIRT2386164	hsa-miR-22	CLIP-seq
MIRT2386165	hsa-miR-4330	CLIP-seq
MIRT2386166	hsa-miR-4769-3p	CLIP-seq
MIRT2386167	hsa-miR-592	CLIP-seq
MIRT2386168	hsa-miR-597	CLIP-seq
MIRT2386161	hsa-miR-1229	CLIP-seq
MIRT2386162	hsa-miR-1245b-3p	CLIP-seq
MIRT2436266	hsa-miR-128	CLIP-seq
MIRT2436267	hsa-miR-148a	CLIP-seq
MIRT2436268	hsa-miR-148b	CLIP-seq
MIRT2436269	hsa-miR-152	CLIP-seq
MIRT2386164	hsa-miR-22	CLIP-seq
MIRT2386165	hsa-miR-4330	CLIP-seq
MIRT2386166	hsa-miR-4769-3p	CLIP-seq
MIRT2504423	hsa-miR-1224-5p	CLIP-seq
MIRT2386161	hsa-miR-1229	CLIP-seq
MIRT2386162	hsa-miR-1245b-3p	CLIP-seq
MIRT2386163	hsa-miR-127-5p	CLIP-seq
MIRT1965533	hsa-miR-1278	CLIP-seq
MIRT2436266	hsa-miR-128	CLIP-seq
MIRT2436267	hsa-miR-148a	CLIP-seq
MIRT2436268	hsa-miR-148b	CLIP-seq
MIRT2436269	hsa-miR-152	CLIP-seq
MIRT1965534	hsa-miR-1587	CLIP-seq
MIRT2504424	hsa-miR-200b	CLIP-seq
MIRT2504425	hsa-miR-200c	CLIP-seq
MIRT2504426	hsa-miR-2054	CLIP-seq
MIRT2386164	hsa-miR-22	CLIP-seq
MIRT2504427	hsa-miR-3121-3p	CLIP-seq
MIRT2504428	hsa-miR-3162-5p	CLIP-seq
MIRT2504429	hsa-miR-3200-3p	CLIP-seq
MIRT2504430	hsa-miR-3545-3p	CLIP-seq
MIRT2504431	hsa-miR-3647-3p	CLIP-seq
MIRT1965535	hsa-miR-3652	CLIP-seq
MIRT2504432	hsa-miR-3662	CLIP-seq
MIRT2504433	hsa-miR-369-3p	CLIP-seq
MIRT1965536	hsa-miR-378g	CLIP-seq
MIRT2504434	hsa-miR-3915	CLIP-seq
MIRT2504435	hsa-miR-3928	CLIP-seq
MIRT895576	hsa-miR-3976	CLIP-seq
MIRT2504436	hsa-miR-4274	CLIP-seq
MIRT2504437	hsa-miR-429	CLIP-seq
MIRT2386165	hsa-miR-4330	CLIP-seq
MIRT2504438	hsa-miR-4424	CLIP-seq
MIRT1965537	hsa-miR-4430	CLIP-seq
MIRT1965538	hsa-miR-4492	CLIP-seq
MIRT2504439	hsa-miR-4495	CLIP-seq
MIRT1965539	hsa-miR-4498	CLIP-seq
MIRT2504440	hsa-miR-4519	CLIP-seq
MIRT2504441	hsa-miR-4539	CLIP-seq
MIRT1965540	hsa-miR-4656	CLIP-seq
MIRT2504442	hsa-miR-4668-5p	CLIP-seq
MIRT1965541	hsa-miR-4675	CLIP-seq
MIRT2504443	hsa-miR-4689	CLIP-seq
MIRT2504444	hsa-miR-4724-3p	CLIP-seq
MIRT1965542	hsa-miR-4741	CLIP-seq
MIRT2386166	hsa-miR-4769-3p	CLIP-seq
MIRT2504445	hsa-miR-4788	CLIP-seq
MIRT2504446	hsa-miR-500a	CLIP-seq
MIRT2504447	hsa-miR-520d-5p	CLIP-seq
MIRT2504448	hsa-miR-524-5p	CLIP-seq
MIRT2504449	hsa-miR-548c-3p	CLIP-seq
MIRT2504450	hsa-miR-570	CLIP-seq
MIRT2504451	hsa-miR-577	CLIP-seq
MIRT2504452	hsa-miR-590-3p	CLIP-seq
MIRT2386167	hsa-miR-592	CLIP-seq
MIRT2386168	hsa-miR-597	CLIP-seq
MIRT1965543	hsa-miR-762	CLIP-seq
MIRT2504453	hsa-miR-935	CLIP-seq
MIRT2504423	hsa-miR-1224-5p	CLIP-seq
MIRT2386161	hsa-miR-1229	CLIP-seq
MIRT2386162	hsa-miR-1245b-3p	CLIP-seq
MIRT2386163	hsa-miR-127-5p	CLIP-seq
MIRT1965533	hsa-miR-1278	CLIP-seq
MIRT2436266	hsa-miR-128	CLIP-seq
MIRT2436267	hsa-miR-148a	CLIP-seq
MIRT2436268	hsa-miR-148b	CLIP-seq
MIRT2436269	hsa-miR-152	CLIP-seq
MIRT1965534	hsa-miR-1587	CLIP-seq
MIRT2504424	hsa-miR-200b	CLIP-seq
MIRT2504425	hsa-miR-200c	CLIP-seq
MIRT2504426	hsa-miR-2054	CLIP-seq
MIRT2386164	hsa-miR-22	CLIP-seq
MIRT2504427	hsa-miR-3121-3p	CLIP-seq
MIRT2504428	hsa-miR-3162-5p	CLIP-seq
MIRT2504429	hsa-miR-3200-3p	CLIP-seq
MIRT2504430	hsa-miR-3545-3p	CLIP-seq
MIRT2504431	hsa-miR-3647-3p	CLIP-seq
MIRT1965535	hsa-miR-3652	CLIP-seq
MIRT2504432	hsa-miR-3662	CLIP-seq
MIRT2504433	hsa-miR-369-3p	CLIP-seq
MIRT1965536	hsa-miR-378g	CLIP-seq
MIRT2504434	hsa-miR-3915	CLIP-seq
MIRT2504435	hsa-miR-3928	CLIP-seq
MIRT895576	hsa-miR-3976	CLIP-seq
MIRT2504436	hsa-miR-4274	CLIP-seq
MIRT2504437	hsa-miR-429	CLIP-seq
MIRT2386165	hsa-miR-4330	CLIP-seq
MIRT2504438	hsa-miR-4424	CLIP-seq
MIRT1965537	hsa-miR-4430	CLIP-seq
MIRT1965538	hsa-miR-4492	CLIP-seq
MIRT2504439	hsa-miR-4495	CLIP-seq
MIRT1965539	hsa-miR-4498	CLIP-seq
MIRT2504440	hsa-miR-4519	CLIP-seq
MIRT2504441	hsa-miR-4539	CLIP-seq
MIRT1965540	hsa-miR-4656	CLIP-seq
MIRT2504442	hsa-miR-4668-5p	CLIP-seq
MIRT1965541	hsa-miR-4675	CLIP-seq
MIRT2504443	hsa-miR-4689	CLIP-seq
MIRT2504444	hsa-miR-4724-3p	CLIP-seq
MIRT1965542	hsa-miR-4741	CLIP-seq
MIRT2386166	hsa-miR-4769-3p	CLIP-seq
MIRT2504445	hsa-miR-4788	CLIP-seq
MIRT2504446	hsa-miR-500a	CLIP-seq
MIRT2678257	hsa-miR-513a-3p	CLIP-seq
MIRT2504447	hsa-miR-520d-5p	CLIP-seq
MIRT2504448	hsa-miR-524-5p	CLIP-seq
MIRT2504449	hsa-miR-548c-3p	CLIP-seq
MIRT2504450	hsa-miR-570	CLIP-seq
MIRT2504451	hsa-miR-577	CLIP-seq
MIRT2504452	hsa-miR-590-3p	CLIP-seq
MIRT2386167	hsa-miR-592	CLIP-seq
MIRT2386168	hsa-miR-597	CLIP-seq
MIRT1965543	hsa-miR-762	CLIP-seq
MIRT2504453	hsa-miR-935	CLIP-seq

Gene ontology (GO) Show/Hide all (7)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	32296183
GO:0005886	Component	Plasma membrane	IEA
GO:0005923	Component	Bicellular tight junction	IEA
GO:0009986	Component	Cell surface	HDA	19581412
GO:0016020	Component	Membrane	IEA
GO:0016324	Component	Apical plasma membrane	IEA
GO:0070161	Component	Anchoring junction	IEA

Other IDs

• MIM: 619677
• HGNC: 1322
• e!Ensembl: ENSG00000080822

Protein

• UniProt ID: Q9NY35
• Protein name: Claudin domain-containing protein 1 (Claudin-25) (Membrane protein GENX-3745)
• Protein function: Plays a role in negatively regulating the permeability of cells to small molecules.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF13903	Claudin_2	17 → 235	PMP-22/EMP/MP20/Claudin tight junction	Family

• Tissue specificity: TISSUE SPECIFICITY: Widely distributed in the adult CNS with highest expression in the corpus callosum, caudate nucleus, cerebral cortex, medulla, putamen, spinal cord, substantia nigra and subthalamic nucleus. Weak expression was detected in the adult he
• Sequence:

  MDNRFATAFVIACVLSLISTIYMAASIGTDFWYEYRSPVQENSSDLNKSIWDEFISDEAD
  EKTYNDALFRYNGTVGLWRRCITIPKNMHWYSPPERTESFDVVTKCVSFTLTEQFMEKFV
  DPGNHNSGIDLLRTYLWRCQFLLPFVSLGLMCFGALIGLCACICRSLYPTIATGILHLLA
  GLCTLGSVSCYVAGIELLHQKLELPDNVSGEFGWSFCLACVSAPLQFMASALFIWAAHTN
  RKEYTLMKAYRVA

• Sequence length: 253

Related Genes

No strongly related genes found yet for CLDND1.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to CLDND1.