CDR1 (cerebellar degeneration related 1)

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Gene miRNA Gene ontology Other IDs Protein Related genes Diseases linked via similar genes

Gene

• Entrez ID: 1038
• Gene name: Cerebellar degeneration related 1
• Gene symbol: CDR1
• Synonyms (NCBI Gene): CDR, CDR34, CDR62A
• Chromosome: X
• Chromosome location: Xq27.1
• Summary: Autoantibodies directed against the protein encoded by this intronless gene have been found in some patients with paraneoplastic cerebellar degeneration. The encoded protein contains several hexapeptide repeats. [provided by RefSeq, Jan 2010]

miRNA Show/Hide all (55)

miRTarBase ID	miRNA	Experiments	Reference
MIRT006184	hsa-miR-671-5p	Luciferase reporter assay, Microarray, Northern blot, qRT-PCR	21964070
MIRT016872	hsa-miR-335-5p	Microarray	18185580
MIRT449685	hsa-miR-10a-3p	PAR-CLIP	22100165
MIRT449684	hsa-miR-6854-5p	PAR-CLIP	22100165
MIRT449683	hsa-miR-135a-5p	PAR-CLIP	22100165
MIRT449682	hsa-miR-135b-5p	PAR-CLIP	22100165
MIRT449681	hsa-miR-3670	PAR-CLIP	22100165
MIRT449680	hsa-miR-555	PAR-CLIP	22100165
MIRT449679	hsa-miR-526b-5p	PAR-CLIP	22100165
MIRT449678	hsa-miR-1225-5p	PAR-CLIP	22100165
MIRT449677	hsa-miR-1229-5p	PAR-CLIP	22100165
MIRT732793	hsa-miR-432-5p	Luciferase reporter assay, Microarray, qRT-PCR, Western blotting	33593338
MIRT732793	hsa-miR-432-5p	Luciferase reporter assay, Microarray, qRT-PCR, Western blotting	33593338
MIRT734901	hsa-miR-641	Luciferase reporter assay, Western blotting, Immunoprecipitaion (IP), qRT-PCR	33907579
MIRT449685	hsa-miR-10a-3p	PAR-CLIP	22100165
MIRT449684	hsa-miR-6854-5p	PAR-CLIP	22100165
MIRT449683	hsa-miR-135a-5p	PAR-CLIP	22100165
MIRT449682	hsa-miR-135b-5p	PAR-CLIP	22100165
MIRT449681	hsa-miR-3670	PAR-CLIP	22100165
MIRT449680	hsa-miR-555	PAR-CLIP	22100165
MIRT449679	hsa-miR-526b-5p	PAR-CLIP	22100165
MIRT449678	hsa-miR-1225-5p	PAR-CLIP	22100165
MIRT449677	hsa-miR-1229-5p	PAR-CLIP	22100165
MIRT882051	hsa-miR-3671	CLIP-seq
MIRT882052	hsa-miR-4761-5p	CLIP-seq
MIRT2446737	hsa-miR-1264	CLIP-seq
MIRT2446738	hsa-miR-145	CLIP-seq
MIRT2446739	hsa-miR-3180-5p	CLIP-seq
MIRT2446740	hsa-miR-323b-3p	CLIP-seq
MIRT2446741	hsa-miR-338-3p	CLIP-seq
MIRT882051	hsa-miR-3671	CLIP-seq
MIRT2446742	hsa-miR-3687	CLIP-seq
MIRT2446743	hsa-miR-3691-3p	CLIP-seq
MIRT2446744	hsa-miR-4267	CLIP-seq
MIRT2446745	hsa-miR-4275	CLIP-seq
MIRT2446746	hsa-miR-4442	CLIP-seq
MIRT2446747	hsa-miR-4530	CLIP-seq
MIRT2446748	hsa-miR-4668-3p	CLIP-seq
MIRT2446749	hsa-miR-4712-5p	CLIP-seq
MIRT2446750	hsa-miR-4716-5p	CLIP-seq
MIRT882052	hsa-miR-4761-5p	CLIP-seq
MIRT2446751	hsa-miR-498	CLIP-seq
MIRT2446752	hsa-miR-520a-5p	CLIP-seq
MIRT2446753	hsa-miR-525-5p	CLIP-seq
MIRT2446754	hsa-miR-545	CLIP-seq
MIRT2446755	hsa-miR-665	CLIP-seq
MIRT2446756	hsa-miR-770-5p	CLIP-seq
MIRT2501284	hsa-miR-3168	CLIP-seq
MIRT2446739	hsa-miR-3180-5p	CLIP-seq
MIRT2446752	hsa-miR-520a-5p	CLIP-seq
MIRT2446753	hsa-miR-525-5p	CLIP-seq
MIRT2501284	hsa-miR-3168	CLIP-seq
MIRT2446739	hsa-miR-3180-5p	CLIP-seq
MIRT2446752	hsa-miR-520a-5p	CLIP-seq
MIRT2446753	hsa-miR-525-5p	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	25416956, 32296183

Other IDs

• MIM: 302650
• HGNC: 1798
• e!Ensembl: HGNC

Protein

• UniProt ID: P51861
• Protein name: Cerebellar degeneration-related antigen 1 (CDR34)
• Tissue specificity: TISSUE SPECIFICITY: Brain; predominantly expressed in normal neuroectodermal tissues and in certain malignant tumors.
• Sequence:

  MAWLEDVDFLEDVPLLEDIPLLEDVPLLEDVPLLEDTSRLEDINLMEDMALLEDVDLLED
  TDFLEDLDFSEAMDLREDKDFLEDMDSLEDMALLEDVDLLEDTDFLEDPDFLEAIDLRED
  KDFLEDMDSLEDLEAIGRCGFSGRHGFFGRRRFSGRPKLSGRLGLLGRRGFSGRLGGYWK
  TWIFWKTWIFWKTWIFRKTYIGWKTWIFSGRCGLTGRPGFGGRRRFFWKTLTDWKTWISF
  WKTLIDWKTWISFWKTLIDWKI

• Sequence length: 262

Related Genes

No strongly related genes found yet for CDR1.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to CDR1.