Gene Gene information from NCBI Gene database.
Entrez ID 1003
Gene name Cadherin 5
Gene symbol CDH5
Synonyms (NCBI Gene)
7B4CD144
Chromosome 16
Chromosome location 16q21
Summary This gene encodes a classical cadherin of the cadherin superfamily. The encoded preproprotein is proteolytically processed to generate the mature glycoprotein. This calcium-dependent cell-cell adhesion molecule is comprised of five extracellular cadherin
miRNA miRNA information provided by mirtarbase database.
94
miRTarBase ID miRNA Experiments Reference
MIRT006257 hsa-miR-211-5p Luciferase reporter assay 22235338
MIRT006257 hsa-miR-211-5p Luciferase reporter assay 22235338
MIRT006257 hsa-miR-211-5p Luciferase reporter assay 22235338
MIRT017265 hsa-miR-335-5p Microarray 18185580
MIRT021947 hsa-miR-128-3p Microarray 17612493
Transcription factors Transcription factors information provided by TRRUST V2 database.
2
Transcription factor Regulation Reference
ERG Unknown 19359602
KLF4 Activation 20724706
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
85
GO ID Ontology Definition Evidence Reference
GO:0000902 Process Cell morphogenesis IBA
GO:0001886 Process Endothelial cell morphogenesis IEA
GO:0001886 Process Endothelial cell morphogenesis ISS
GO:0001955 Process Blood vessel maturation IEA
GO:0002042 Process Cell migration involved in sprouting angiogenesis IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601120 1764 ENSG00000179776
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P33151
Protein name Cadherin-5 (7B4 antigen) (Vascular endothelial cadherin) (VE-cadherin) (CD antigen CD144)
Protein function Cadherins are calcium-dependent cell adhesion proteins (By similarity). They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types (PubMed:212
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00028 Cadherin 52 142 Cadherin domain Domain
PF00028 Cadherin 156 249 Cadherin domain Domain
PF00028 Cadherin 263 364 Cadherin domain Domain
PF00028 Cadherin 377 470 Cadherin domain Domain
PF00028 Cadherin 483 576 Cadherin domain Domain
PF01049 Cadherin_C 621 777 Cadherin cytoplasmic region Family
Tissue specificity TISSUE SPECIFICITY: Expressed in endothelial cells (at protein level) (PubMed:27338829). Expressed in the brain (PubMed:2059658). {ECO:0000269|PubMed:2059658, ECO:0000269|PubMed:27338829}.
Sequence
Sequence length 784
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
9
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
BILIARY CIRRHOSIS Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BREAST NEOPLASMS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
COLORECTAL NEOPLASMS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LIVER CIRRHOSIS, BILIARY CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute leukemia Leukemia BEFREE 11106238
★☆☆☆☆
Found in Text Mining only
Adenoid Cystic Carcinoma Adenocarcinoma BEFREE 15044918
★☆☆☆☆
Found in Text Mining only
Adult Medulloblastoma Medulloblastoma BEFREE 31346954
★☆☆☆☆
Found in Text Mining only
Alveolar capillary dysplasia Alveolar capillary dysplasia Pubtator 38029923 Associate
★☆☆☆☆
Found in Text Mining only
Antiphospholipid Syndrome Antiphospholipid syndrome Pubtator 11937138 Stimulate
★☆☆☆☆
Found in Text Mining only
Antiphospholipid Syndrome Antiphospholipid syndrome Pubtator 38155384 Associate
★☆☆☆☆
Found in Text Mining only
Aortic Aneurysm Aortic Aneurysm BEFREE 24526692
★☆☆☆☆
Found in Text Mining only
Arteriosclerosis Arteriosclerosis BEFREE 28424820, 30340104
★☆☆☆☆
Found in Text Mining only
Arthritis Juvenile Juvenile arthritis Pubtator 33144896 Associate
★☆☆☆☆
Found in Text Mining only
Arthritis Rheumatoid Rheumatoid arthritis Pubtator 21905018 Associate
★☆☆☆☆
Found in Text Mining only