CCDC9 (coiled-coil domain containing 9)

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Gene miRNA Gene ontology Other IDs Protein Related genes Diseases linked via similar genes

Gene

• Entrez ID: 26093
• Gene name: Coiled-coil domain containing 9
• Gene symbol: CCDC9
• Synonyms (NCBI Gene): -
• Chromosome: 19
• Chromosome location: 19q13.32

miRNA Show/Hide all (103)

miRTarBase ID	miRNA	Experiments	Reference
MIRT607466	hsa-miR-8485	HITS-CLIP	19536157
MIRT683215	hsa-miR-1251-5p	HITS-CLIP	19536157
MIRT607466	hsa-miR-8485	HITS-CLIP	23313552
MIRT607466	hsa-miR-8485	HITS-CLIP	23313552
MIRT607466	hsa-miR-8485	HITS-CLIP	23706177
MIRT683215	hsa-miR-1251-5p	HITS-CLIP	23706177
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	23824327
MIRT607466	hsa-miR-8485	HITS-CLIP	24906430
MIRT500244	hsa-miR-371a-3p	PAR-CLIP	20371350
MIRT500243	hsa-miR-1825	PAR-CLIP	20371350
MIRT500242	hsa-miR-7977	PAR-CLIP	20371350
MIRT500244	hsa-miR-371a-3p	PAR-CLIP	20371350
MIRT500243	hsa-miR-1825	PAR-CLIP	20371350
MIRT500242	hsa-miR-7977	PAR-CLIP	20371350
MIRT500244	hsa-miR-371a-3p	PAR-CLIP	24398324
MIRT500243	hsa-miR-1825	PAR-CLIP	24398324
MIRT500242	hsa-miR-7977	PAR-CLIP	24398324
MIRT575830	hsa-miR-8485	HITS-CLIP	27418678
MIRT575830	hsa-miR-8485	HITS-CLIP	27418678
MIRT575830	hsa-miR-8485	HITS-CLIP	27418678
MIRT575830	hsa-miR-8485	HITS-CLIP	19536157
MIRT683215	hsa-miR-1251-5p	HITS-CLIP	19536157
MIRT575830	hsa-miR-8485	HITS-CLIP	23313552
MIRT575830	hsa-miR-8485	HITS-CLIP	23313552
MIRT575830	hsa-miR-8485	HITS-CLIP	23706177
MIRT683215	hsa-miR-1251-5p	HITS-CLIP	23706177
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT575830	hsa-miR-8485	HITS-CLIP	23824327
MIRT500244	hsa-miR-371a-3p	PAR-CLIP	20371350
MIRT500243	hsa-miR-1825	PAR-CLIP	20371350
MIRT500242	hsa-miR-7977	PAR-CLIP	20371350
MIRT500244	hsa-miR-371a-3p	PAR-CLIP	20371350
MIRT500243	hsa-miR-1825	PAR-CLIP	20371350
MIRT500242	hsa-miR-7977	PAR-CLIP	20371350
MIRT500244	hsa-miR-371a-3p	PAR-CLIP	24398324
MIRT500243	hsa-miR-1825	PAR-CLIP	24398324
MIRT500242	hsa-miR-7977	PAR-CLIP	24398324
MIRT870484	hsa-miR-101	CLIP-seq
MIRT870485	hsa-miR-1587	CLIP-seq
MIRT870486	hsa-miR-4492	CLIP-seq
MIRT870487	hsa-miR-4498	CLIP-seq
MIRT870488	hsa-miR-4514	CLIP-seq
MIRT870489	hsa-miR-4645-3p	CLIP-seq
MIRT870490	hsa-miR-4656	CLIP-seq
MIRT870491	hsa-miR-4675	CLIP-seq
MIRT870492	hsa-miR-4692	CLIP-seq
MIRT870493	hsa-miR-4741	CLIP-seq
MIRT870494	hsa-miR-604	CLIP-seq
MIRT870495	hsa-miR-762	CLIP-seq
MIRT1958413	hsa-miR-2110	CLIP-seq
MIRT1958414	hsa-miR-3150a-3p	CLIP-seq
MIRT1958415	hsa-miR-3175	CLIP-seq
MIRT1958416	hsa-miR-4283	CLIP-seq
MIRT1958417	hsa-miR-4452	CLIP-seq
MIRT1958418	hsa-miR-4728-5p	CLIP-seq
MIRT1958419	hsa-miR-939	CLIP-seq
MIRT870484	hsa-miR-101	CLIP-seq
MIRT1958413	hsa-miR-2110	CLIP-seq
MIRT1958414	hsa-miR-3150a-3p	CLIP-seq
MIRT1958415	hsa-miR-3175	CLIP-seq
MIRT2195264	hsa-miR-3180-5p	CLIP-seq
MIRT2195265	hsa-miR-4253	CLIP-seq
MIRT1958416	hsa-miR-4283	CLIP-seq
MIRT1958417	hsa-miR-4452	CLIP-seq
MIRT870488	hsa-miR-4514	CLIP-seq
MIRT870489	hsa-miR-4645-3p	CLIP-seq
MIRT870492	hsa-miR-4692	CLIP-seq
MIRT1958418	hsa-miR-4728-5p	CLIP-seq
MIRT2195266	hsa-miR-483-5p	CLIP-seq
MIRT2195267	hsa-miR-520a-5p	CLIP-seq
MIRT2195268	hsa-miR-525-5p	CLIP-seq
MIRT1958419	hsa-miR-939	CLIP-seq
MIRT1958413	hsa-miR-2110	CLIP-seq
MIRT1958414	hsa-miR-3150a-3p	CLIP-seq
MIRT1958415	hsa-miR-3175	CLIP-seq
MIRT1958416	hsa-miR-4283	CLIP-seq
MIRT1958417	hsa-miR-4452	CLIP-seq
MIRT1958418	hsa-miR-4728-5p	CLIP-seq
MIRT1958419	hsa-miR-939	CLIP-seq
MIRT2427158	hsa-miR-1251	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0003723	Function	RNA binding	HDA	22658674, 22681889
GO:0003723	Function	RNA binding	IDA	33973408
GO:0005515	Function	Protein binding	IPI	21044950, 32814053, 35156780
GO:0035145	Component	Exon-exon junction complex	IDA	33973408

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q9Y3X0
• Protein name: Coiled-coil domain-containing protein 9
• Protein function: Probable component of the exon junction complex (EJC), a multiprotein complex that associates immediately upstream of the exon-exon junction on mRNAs and serves as a positional landmark for the intron exon structure of genes and directs post-tra
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF15266	DUF4594	205 → 376	Domain of unknown function (DUF4594)	Family

• Sequence:

  MAATLDLKSKEEKDAELDKRIEALRRKNEALIRRYQEIEEDRKKAELEGVAVTAPRKGRS
  VEKENVAVESEKNLGPSRRSPGTPRPPGASKGGRTPPQQGGRAGMGRASRSWEGSPGEQP
  RGGGAGGRGRRGRGRGSPHLSGAGDTSISDRKSKEWEERRRQNIEKMNEEMEKIAEYERN
  QREGVLEPNPVRNFLDDPRRRSGPLEESERDRREESRRHGRNWGGPDFERVRCGLEHERQ
  GRRAGLGSAGDMTLSMTGRERSEYLRWKQEREKIDQERLQRHRKPTGQWRREWDAEKTDG
  MFKDGPVPAHEPSHRYDDQAWARPPKPPTFGEFLSQHKAEASSRRRRKSSRPQAKAAPRA
  YSDHDDRWETKEGAASPAPETPQPTSPETSPKETPMQPPEIPAPAHRPPEDEGEENEGEE
  DEEWEDISEDEEEEEIEVEEGDEEEPAQDHQAPEAAPTGIPCSEQAHGVPFSPEEPLLEP
  QAPGTPSSPFSPPSGHQPVSDWGEEVELNSPRTTHLAGALSPGEAWPFESV

• Sequence length: 531

Related Genes

No strongly related genes found yet for CCDC9.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to CCDC9.