CCDC82 (coiled-coil domain containing 82)

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Gene miRNA Gene ontology Other IDs Protein Associated diseases Related genes Diseases linked via similar genes

Gene

• Entrez ID: 79780
• Gene name: Coiled-coil domain containing 82
• Gene symbol: CCDC82
• Synonyms (NCBI Gene): HSPC048
• Chromosome: 11
• Chromosome location: 11q21

miRNA Show/Hide all (96)

miRTarBase ID	miRNA	Experiments	Reference
MIRT020779	hsa-miR-155-5p	Reporter assay;Other	20584899
MIRT020779	hsa-miR-155-5p	HITS-CLIP	22473208
MIRT020779	hsa-miR-155-5p	HITS-CLIP	22473208
MIRT869880	hsa-miR-3163	CLIP-seq
MIRT869881	hsa-miR-3647-3p	CLIP-seq
MIRT869882	hsa-miR-4282	CLIP-seq
MIRT869883	hsa-miR-4422	CLIP-seq
MIRT869884	hsa-miR-4432	CLIP-seq
MIRT869885	hsa-miR-488	CLIP-seq
MIRT869886	hsa-miR-518d-5p	CLIP-seq
MIRT869887	hsa-miR-519b-5p	CLIP-seq
MIRT869888	hsa-miR-519c-5p	CLIP-seq
MIRT869889	hsa-miR-520c-5p	CLIP-seq
MIRT869890	hsa-miR-526a	CLIP-seq
MIRT869891	hsa-miR-548u	CLIP-seq
MIRT2195067	hsa-miR-3614-5p	CLIP-seq
MIRT2436126	hsa-miR-27a	CLIP-seq
MIRT2436127	hsa-miR-27b	CLIP-seq
MIRT2195067	hsa-miR-3614-5p	CLIP-seq
MIRT2436128	hsa-miR-421	CLIP-seq
MIRT2436129	hsa-miR-4252	CLIP-seq
MIRT2436130	hsa-miR-4645-3p	CLIP-seq
MIRT2436131	hsa-miR-4662a-3p	CLIP-seq
MIRT2436132	hsa-miR-4709-5p	CLIP-seq
MIRT2436133	hsa-miR-513a-5p	CLIP-seq
MIRT2498370	hsa-miR-1246	CLIP-seq
MIRT2498371	hsa-miR-1261	CLIP-seq
MIRT2498372	hsa-miR-142-5p	CLIP-seq
MIRT2498373	hsa-miR-23a	CLIP-seq
MIRT2498374	hsa-miR-23b	CLIP-seq
MIRT2498375	hsa-miR-23c	CLIP-seq
MIRT2436126	hsa-miR-27a	CLIP-seq
MIRT2436127	hsa-miR-27b	CLIP-seq
MIRT2498376	hsa-miR-3136-3p	CLIP-seq
MIRT2498377	hsa-miR-3148	CLIP-seq
MIRT869880	hsa-miR-3163	CLIP-seq
MIRT2498378	hsa-miR-340	CLIP-seq
MIRT2195067	hsa-miR-3614-5p	CLIP-seq
MIRT2498379	hsa-miR-3662	CLIP-seq
MIRT2498380	hsa-miR-3688-3p	CLIP-seq
MIRT2498381	hsa-miR-410	CLIP-seq
MIRT2498382	hsa-miR-412	CLIP-seq
MIRT2436128	hsa-miR-421	CLIP-seq
MIRT2436129	hsa-miR-4252	CLIP-seq
MIRT2498383	hsa-miR-4307	CLIP-seq
MIRT2498384	hsa-miR-433	CLIP-seq
MIRT2436130	hsa-miR-4645-3p	CLIP-seq
MIRT2498385	hsa-miR-4659a-3p	CLIP-seq
MIRT2498386	hsa-miR-4659a-5p	CLIP-seq
MIRT2498387	hsa-miR-4659b-3p	CLIP-seq
MIRT2498388	hsa-miR-4659b-5p	CLIP-seq
MIRT2436131	hsa-miR-4662a-3p	CLIP-seq
MIRT2498389	hsa-miR-4699-3p	CLIP-seq
MIRT2498390	hsa-miR-4699-5p	CLIP-seq
MIRT2498391	hsa-miR-4700-3p	CLIP-seq
MIRT2436132	hsa-miR-4709-5p	CLIP-seq
MIRT2498392	hsa-miR-4717-3p	CLIP-seq
MIRT2498393	hsa-miR-4725-5p	CLIP-seq
MIRT2498394	hsa-miR-4776-3p	CLIP-seq
MIRT2498395	hsa-miR-4795-3p	CLIP-seq
MIRT2498396	hsa-miR-504	CLIP-seq
MIRT2498397	hsa-miR-5095	CLIP-seq
MIRT2436133	hsa-miR-513a-5p	CLIP-seq
MIRT2498398	hsa-miR-548c-3p	CLIP-seq
MIRT2498399	hsa-miR-577	CLIP-seq
MIRT2498372	hsa-miR-142-5p	CLIP-seq
MIRT2498373	hsa-miR-23a	CLIP-seq
MIRT2498374	hsa-miR-23b	CLIP-seq
MIRT2498375	hsa-miR-23c	CLIP-seq
MIRT2436126	hsa-miR-27a	CLIP-seq
MIRT2436127	hsa-miR-27b	CLIP-seq
MIRT2498376	hsa-miR-3136-3p	CLIP-seq
MIRT869880	hsa-miR-3163	CLIP-seq
MIRT2498378	hsa-miR-340	CLIP-seq
MIRT2195067	hsa-miR-3614-5p	CLIP-seq
MIRT2498379	hsa-miR-3662	CLIP-seq
MIRT2498382	hsa-miR-412	CLIP-seq
MIRT2436128	hsa-miR-421	CLIP-seq
MIRT2436129	hsa-miR-4252	CLIP-seq
MIRT2498383	hsa-miR-4307	CLIP-seq
MIRT2498384	hsa-miR-433	CLIP-seq
MIRT2436130	hsa-miR-4645-3p	CLIP-seq
MIRT2498385	hsa-miR-4659a-3p	CLIP-seq
MIRT2498386	hsa-miR-4659a-5p	CLIP-seq
MIRT2498387	hsa-miR-4659b-3p	CLIP-seq
MIRT2498388	hsa-miR-4659b-5p	CLIP-seq
MIRT2436131	hsa-miR-4662a-3p	CLIP-seq
MIRT2498390	hsa-miR-4699-5p	CLIP-seq
MIRT2498391	hsa-miR-4700-3p	CLIP-seq
MIRT2436132	hsa-miR-4709-5p	CLIP-seq
MIRT2498392	hsa-miR-4717-3p	CLIP-seq
MIRT2498394	hsa-miR-4776-3p	CLIP-seq
MIRT2498395	hsa-miR-4795-3p	CLIP-seq
MIRT2498397	hsa-miR-5095	CLIP-seq
MIRT2436133	hsa-miR-513a-5p	CLIP-seq
MIRT2498399	hsa-miR-577	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005634	Component	Nucleus	IBA

Other IDs

• MIM: 619870
• HGNC: 26282
• e!Ensembl: ENSG00000149231

Protein

• UniProt ID: Q8N4S0
• Protein name: Coiled-coil domain-containing protein 82
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF13846	DUF4196	147 → 236	Domain of unknown function (DUF4196)	Domain
  PF13846	DUF4196	98 → 152	Domain of unknown function (DUF4196)	Domain
  PF13926	DUF4211	297 → 449	Domain of unknown function (DUF4211)	Family

• Sequence:

  MIHVRRHETRRNSKSHVPEQKSRVDWRRTKRSSISQLLDSDEELDSEEFDSDEELDSDES
  FENDEELDSNKGPDCNKTPGSERELNLSKIQSEGNDSKCLINSGNGSTYEEETNKIKHRN
  IDLQDQEKHLSQEDNDLNKQTGQIIEDDQEKHLSQEDNDLNKQTGQIIEDDLEEEDIKRG
  KRKRLSSVMCDSDESDDSDILVRKVGVKRPRRVVEDEGSSVEMEQKTPEKTLAAQKREKL
  QKLKELSKQRSRQRRSSGRDFEDSEKESCPSSDEVDEEEEEDNYESDEDGDDYIIDDFVV
  QDEEGDEENKNQQGEKLTTSQLKLVKQNSLYSFSDHYTHFERVVKALLINALDESFLGTL
  YDGTRQKSYAKDMLTSLHYLDNRFVQPRLESLVSRSRWKEQYKERVENYSNVSIHLKNPE
  NCSCQACGLHRYCKYSVHLSGELYNTRTMQIDNFMSHDKQVFTVGRICASRTRIYHKLKH
  FKFKLYQECCTIAMTEEVEDEQVKETVERIFRRSKENGWIKEKYGQLEEYLNFADYFQEE
  KFEL

• Sequence length: 544

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Causal
Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession	Evidence Score
Intellectual disability	Likely pathogenic	rs1866090527	RCV002287618	★★★★☆ ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Reference	Evidence Score
Gastric cancer	Conflicting classifications of pathogenicity	ClinVar	—	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PARKINSON DISEASE	—	GWAS catalog	23793441	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Syndromic intellectual disability	Conflicting classifications of pathogenicity	ClinVar	—	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Parkinson Disease	Parkinson disease	GWASCAT_DG	23793441		★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Parkinson Disease	Parkinson disease	GWASDB_DG	23793441		★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Related Genes

No strongly related genes found yet for CCDC82.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to CCDC82.