Gene Gene information from NCBI Gene database.
Entrez ID 728
Gene name Complement C5a receptor 1
Gene symbol C5AR1
Synonyms (NCBI Gene)
C5AC5ARC5R1CD88
Chromosome 19
Chromosome location 19q13.32
miRNA miRNA information provided by mirtarbase database.
84
miRTarBase ID miRNA Experiments Reference
MIRT019124 hsa-miR-335-5p Microarray 18185580
MIRT030190 hsa-miR-26b-5p Microarray 19088304
MIRT848590 hsa-miR-1262 CLIP-seq
MIRT848591 hsa-miR-1343 CLIP-seq
MIRT848592 hsa-miR-3179 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
55
GO ID Ontology Definition Evidence Reference
GO:0001774 Process Microglial cell activation IEA
GO:0001774 Process Microglial cell activation ISS
GO:0002430 Process Complement receptor mediated signaling pathway IBA
GO:0002430 Process Complement receptor mediated signaling pathway IDA 37169960
GO:0002682 Process Regulation of immune system process IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
113995 1338 ENSG00000197405
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P21730
Protein name C5a anaphylatoxin chemotactic receptor 1 (C5a anaphylatoxin chemotactic receptor) (C5a-R) (C5aR) (CD antigen CD88)
Protein function Receptor for the chemotactic and inflammatory peptide anaphylatoxin C5a (PubMed:10636859, PubMed:15153520, PubMed:1847994, PubMed:29300009, PubMed:7622471, PubMed:8182049, PubMed:9553099). The ligand interacts with at least two sites on the rece
PDB 2K3U , 5O9H , 6C1Q , 6C1R , 7Y64 , 7Y65 , 7Y66 , 7Y67 , 8GO8 , 8GOO , 8HK5 , 8I0N , 8I0Z , 8IA2 , 8JZP , 8JZZ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00001 7tm_1 54 300 7 transmembrane receptor (rhodopsin family) Family
Sequence
Sequence length 350
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
4
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
C5AR1-related disorder Uncertain significance; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LIVER CIRRHOSIS, EXPERIMENTAL CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
PERIODONTITIS GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
TOXIC SHOCK SYNDROME Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adrenoleukodystrophy Adrenoleukodystrophy BEFREE 30294325
★☆☆☆☆
Found in Text Mining only
Allergic sensitization Allergic Sensitization BEFREE 16889830
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 23394121, 30403186 Associate
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 37679689 Stimulate
★☆☆☆☆
Found in Text Mining only
AMR Syndrome Amr syndrome Pubtator 38128610 Associate
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis BEFREE 24067070, 28128456, 28571586, 29859100
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic lateral sclerosis Pubtator 33216044 Associate
★☆☆☆☆
Found in Text Mining only
Anaphylaxis Anaphylaxis Pubtator 16301808 Associate
★☆☆☆☆
Found in Text Mining only
Antiphospholipid Syndrome Antiphospholipid syndrome Pubtator 16982920 Associate
★☆☆☆☆
Found in Text Mining only
Aortic Aneurysm Abdominal Aortic aneurysm Pubtator 33332020 Associate
★☆☆☆☆
Found in Text Mining only