C1orf87 (chromosome 1 open reading frame 87)

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Gene miRNA Gene ontology Other IDs Protein Associated diseases Related genes Diseases linked via similar genes

Gene

• Entrez ID: 127795
• Gene name: Chromosome 1 open reading frame 87
• Gene symbol: C1orf87
• Synonyms (NCBI Gene): CREF
• Chromosome: 1
• Chromosome location: 1p32.1

miRNA Show/Hide all (94)

miRTarBase ID	miRNA	Experiments	Reference
MIRT616392	hsa-miR-4714-5p	HITS-CLIP	23824327
MIRT616391	hsa-miR-22-3p	HITS-CLIP	23824327
MIRT616390	hsa-miR-6777-3p	HITS-CLIP	23824327
MIRT616388	hsa-miR-1234-3p	HITS-CLIP	23824327
MIRT616389	hsa-miR-7107-5p	HITS-CLIP	23824327
MIRT616387	hsa-miR-301a-5p	HITS-CLIP	23824327
MIRT616386	hsa-miR-301b-5p	HITS-CLIP	23824327
MIRT616385	hsa-miR-6730-3p	HITS-CLIP	23824327
MIRT616384	hsa-miR-3660	HITS-CLIP	23824327
MIRT616383	hsa-miR-4526	HITS-CLIP	23824327
MIRT616382	hsa-miR-6719-3p	HITS-CLIP	23824327
MIRT616392	hsa-miR-4714-5p	HITS-CLIP	23824327
MIRT616391	hsa-miR-22-3p	HITS-CLIP	23824327
MIRT616390	hsa-miR-6777-3p	HITS-CLIP	23824327
MIRT616388	hsa-miR-1234-3p	HITS-CLIP	23824327
MIRT616389	hsa-miR-7107-5p	HITS-CLIP	23824327
MIRT616387	hsa-miR-301a-5p	HITS-CLIP	23824327
MIRT616386	hsa-miR-301b-5p	HITS-CLIP	23824327
MIRT616385	hsa-miR-6730-3p	HITS-CLIP	23824327
MIRT616384	hsa-miR-3660	HITS-CLIP	23824327
MIRT616383	hsa-miR-4526	HITS-CLIP	23824327
MIRT616382	hsa-miR-6719-3p	HITS-CLIP	23824327
MIRT616392	hsa-miR-4714-5p	HITS-CLIP	23824327
MIRT616391	hsa-miR-22-3p	HITS-CLIP	23824327
MIRT616390	hsa-miR-6777-3p	HITS-CLIP	23824327
MIRT616388	hsa-miR-1234-3p	HITS-CLIP	23824327
MIRT616389	hsa-miR-7107-5p	HITS-CLIP	23824327
MIRT616387	hsa-miR-301a-5p	HITS-CLIP	23824327
MIRT616386	hsa-miR-301b-5p	HITS-CLIP	23824327
MIRT616385	hsa-miR-6730-3p	HITS-CLIP	23824327
MIRT616384	hsa-miR-3660	HITS-CLIP	23824327
MIRT616383	hsa-miR-4526	HITS-CLIP	23824327
MIRT616382	hsa-miR-6719-3p	HITS-CLIP	23824327
MIRT616392	hsa-miR-4714-5p	HITS-CLIP	23824327
MIRT616391	hsa-miR-22-3p	HITS-CLIP	23824327
MIRT616390	hsa-miR-6777-3p	HITS-CLIP	23824327
MIRT616388	hsa-miR-1234-3p	HITS-CLIP	23824327
MIRT616389	hsa-miR-7107-5p	HITS-CLIP	23824327
MIRT616387	hsa-miR-301a-5p	HITS-CLIP	23824327
MIRT616386	hsa-miR-301b-5p	HITS-CLIP	23824327
MIRT616385	hsa-miR-6730-3p	HITS-CLIP	23824327
MIRT616384	hsa-miR-3660	HITS-CLIP	23824327
MIRT616383	hsa-miR-4526	HITS-CLIP	23824327
MIRT616382	hsa-miR-6719-3p	HITS-CLIP	23824327
MIRT616392	hsa-miR-4714-5p	HITS-CLIP	23824327
MIRT616391	hsa-miR-22-3p	HITS-CLIP	23824327
MIRT616390	hsa-miR-6777-3p	HITS-CLIP	23824327
MIRT616388	hsa-miR-1234-3p	HITS-CLIP	23824327
MIRT616389	hsa-miR-7107-5p	HITS-CLIP	23824327
MIRT616387	hsa-miR-301a-5p	HITS-CLIP	23824327
MIRT616386	hsa-miR-301b-5p	HITS-CLIP	23824327
MIRT616385	hsa-miR-6730-3p	HITS-CLIP	23824327
MIRT616384	hsa-miR-3660	HITS-CLIP	23824327
MIRT616383	hsa-miR-4526	HITS-CLIP	23824327
MIRT616382	hsa-miR-6719-3p	HITS-CLIP	23824327
MIRT616392	hsa-miR-4714-5p	HITS-CLIP	23824327
MIRT616391	hsa-miR-22-3p	HITS-CLIP	23824327
MIRT616390	hsa-miR-6777-3p	HITS-CLIP	23824327
MIRT616388	hsa-miR-1234-3p	HITS-CLIP	23824327
MIRT616389	hsa-miR-7107-5p	HITS-CLIP	23824327
MIRT616387	hsa-miR-301a-5p	HITS-CLIP	23824327
MIRT616386	hsa-miR-301b-5p	HITS-CLIP	23824327
MIRT616385	hsa-miR-6730-3p	HITS-CLIP	23824327
MIRT616384	hsa-miR-3660	HITS-CLIP	23824327
MIRT616383	hsa-miR-4526	HITS-CLIP	23824327
MIRT616382	hsa-miR-6719-3p	HITS-CLIP	23824327
MIRT616392	hsa-miR-4714-5p	HITS-CLIP	23824327
MIRT616391	hsa-miR-22-3p	HITS-CLIP	23824327
MIRT616390	hsa-miR-6777-3p	HITS-CLIP	23824327
MIRT616388	hsa-miR-1234-3p	HITS-CLIP	23824327
MIRT616389	hsa-miR-7107-5p	HITS-CLIP	23824327
MIRT616387	hsa-miR-301a-5p	HITS-CLIP	23824327
MIRT616386	hsa-miR-301b-5p	HITS-CLIP	23824327
MIRT616385	hsa-miR-6730-3p	HITS-CLIP	23824327
MIRT616384	hsa-miR-3660	HITS-CLIP	23824327
MIRT616383	hsa-miR-4526	HITS-CLIP	23824327
MIRT616382	hsa-miR-6719-3p	HITS-CLIP	23824327
MIRT616392	hsa-miR-4714-5p	HITS-CLIP	23824327
MIRT616391	hsa-miR-22-3p	HITS-CLIP	23824327
MIRT616390	hsa-miR-6777-3p	HITS-CLIP	23824327
MIRT616388	hsa-miR-1234-3p	HITS-CLIP	23824327
MIRT616389	hsa-miR-7107-5p	HITS-CLIP	23824327
MIRT616387	hsa-miR-301a-5p	HITS-CLIP	23824327
MIRT616386	hsa-miR-301b-5p	HITS-CLIP	23824327
MIRT616385	hsa-miR-6730-3p	HITS-CLIP	23824327
MIRT616384	hsa-miR-3660	HITS-CLIP	23824327
MIRT616383	hsa-miR-4526	HITS-CLIP	23824327
MIRT616382	hsa-miR-6719-3p	HITS-CLIP	23824327
MIRT841677	hsa-miR-1234	CLIP-seq
MIRT841678	hsa-miR-22	CLIP-seq
MIRT1949510	hsa-miR-338-5p	CLIP-seq
MIRT2676761	hsa-miR-1283	CLIP-seq
MIRT1949510	hsa-miR-338-5p	CLIP-seq
MIRT2676762	hsa-miR-4422	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005929	Component	Cilium	IDA	28282151
GO:0005930	Component	Axoneme	IDA	28282151

Other IDs

• MIM: 618860
• HGNC: 28547
• e!Ensembl: ENSG00000162598

Protein

• UniProt ID: Q8N0U7
• Protein name: Uncharacterized protein C1orf87
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF17743	DUF5580	1 → 546	Family of unknown function (DUF5580)	Family

• Sequence:

  MSSAWKTPRGSDAMPEIMVKIIGSKHFQYLVEKPKIKENDSLKTETQTMHQKPMTDNARQ
  MSRDTPVPINFTDQQTTDNPDDVKEKKHPENNQKSENNQKLLTGANSSRFLDGNIPSQAN
  VHCSSVPTGDQSLSYVHGIPRRKLRDWSLEQMVRGSSDQPEDIGQSPSGTTNEDAFLLAL
  VRRELKSRPLSSNLLEKLQKELKILDPISSGFLLQSQLSRLFLKHEVPLQLPTVKILCQR
  FSKRGSPEMVNYEKLLWFLNSAASDYPQQNKAAADLRKTESHGTHSQSTPPQHSSSQPEV
  NRSLLEILKMALRTTNGRLNIDNLNLSFRKEDRSFSGCLPLPKVRAICGKHGLYLTLSLL
  ETLLNHQDLGYQNEIKWQNFVEMLTRASSDLLSDLPTGKNEKKAPAPPMEPEVPEMSQSK
  TEHMKTPEEELQPESSPAETSACKDPLKPLKIRPVSQPFVNPAVKNKAEECETWIDRFRK
  LENALYLCDLSNTGVLEKERARRLIHNYNLIYNLSLSPQKIDQALRRFRSGENMLLEPAL
  RYLKEL

• Sequence length: 546

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Reference	Evidence Score
CENTRAL NERVOUS SYSTEM CANCER	—	GWAS catalog	36810956	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
DYSLEXIA	—	GWAS catalog	36266505	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
GLIOMA	—	GWAS catalog	36810956	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
MIGRAINE DISORDER	—	GWAS catalog	35115687	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Malignant neoplasm of breast	Breast Cancer	UNIPROT_DG			★☆☆☆☆ Found in Text Mining only
Neoplasms	Neoplasms	BEFREE	1580547		★☆☆☆☆ Found in Text Mining only

Related Genes

No strongly related genes found yet for C1orf87.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to C1orf87.