BANF1 (barrier to autointegration nuclear assembly factor 1)
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Gene
Gene information from NCBI Gene database.
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| Entrez ID | 8815 |
| Gene name | Barrier to autointegration nuclear assembly factor 1 |
| Gene symbol | BANF1 |
| Synonyms (NCBI Gene) |
BAFBCRP1D14S1460NGPS
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| Chromosome | 11 |
| Chromosome location | 11q13.1 |
| Summary | The protein encoded by this gene was first identified by its ability to protect retroviruses from intramolecular integration and therefore promote intermolecular integration into the host cell genome. The protein forms a homodimer which localizes to both |
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miRNA
miRNA information provided by mirtarbase database.
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Gene ontology (GO)
Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
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Other IDs
Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
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Protein
Protein information from UniProt database.
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UniProt ID
Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
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O75531 | ||||||||||
| Protein name | Barrier-to-autointegration factor (Breakpoint cluster region protein 1) [Cleaved into: Barrier-to-autointegration factor, N-terminally processed] | ||||||||||
| Protein function | Non-specific DNA-binding protein that plays key roles in mitotic nuclear reassembly, chromatin organization, DNA damage response, gene expression and intrinsic immunity against foreign DNA (PubMed:10908652, PubMed:11792822, PubMed:12163470, PubM | ||||||||||
| PDB | 1CI4 , 1QCK , 2BZF , 2EZX , 2EZY , 2EZZ , 2ODG , 6GHD , 6RPR , 6UNT , 6URE , 6URJ , 6URK , 6URL , 6URN , 6URR , 6URZ , 6US0 , 6US1 , 6US7 , 6USB , 6USD , 6USI , 7ABM , 7NDY , 7Z21 , 9J8M , 9J8N , 9J8O | ||||||||||
| Family and domains |
Pfam
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| Tissue specificity | TISSUE SPECIFICITY: Widely expressed. Expressed in colon, brain, heart, kidney, liver, lung, ovary, pancreas, placenta, prostate, skeletal muscle, small intestine, spleen and testis. Not detected in thymus and peripheral blood leukocytes. {ECO:0000269|Pub | ||||||||||
| Sequence | |||||||||||
| Sequence length | 89 | ||||||||||
| Interactions | View interactions | ||||||||||
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Pathways
Pathway information has different metabolic/signaling pathways associated with genes.
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Associated diseases
Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
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Evidence Score:
★☆☆☆☆ Gene-disease association found in Text Mining only
★★☆☆☆ Found in Text Mining and Unknown/Other Associations
★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources
★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
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Related Genes
Genes most often co-reported with BANF1 across shared curated disease and pathway associations.
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Diseases Linked via Similar Genes
Diseases curated for genes most similar to BANF1 (see Related Genes above), that are NOT already directly curated for BANF1 itself -- a lead worth checking, not a confirmed association.
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