Gene Gene information from NCBI Gene database.
Entrez ID 7915
Gene name Aldehyde dehydrogenase 5 family member A1
Gene symbol ALDH5A1
Synonyms (NCBI Gene)
SSADHSSDH
Chromosome 6
Chromosome location 6p22.3
Summary This protein belongs to the aldehyde dehydrogenase family of proteins. This gene encodes a mitochondrial NAD(+)-dependent succinic semialdehyde dehydrogenase. A deficiency of this enzyme, known as 4-hydroxybutyricaciduria, is a rare inborn error in the me
SNPs SNP information provided by dbSNP.
24
SNP ID Visualize variation Clinical significance Consequence
rs72552281 G>A Pathogenic Coding sequence variant, missense variant
rs72552282 G>A Likely-pathogenic Coding sequence variant, missense variant
rs72552284 G>A,C Likely-pathogenic Coding sequence variant, missense variant
rs115784602 G>A Conflicting-interpretations-of-pathogenicity, uncertain-significance Missense variant, coding sequence variant
rs118203982 G>A Pathogenic Stop gained, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
471
miRTarBase ID miRNA Experiments Reference
MIRT020822 hsa-miR-155-5p Proteomics 18668040
MIRT024624 hsa-miR-215-5p Microarray 19074876
MIRT026627 hsa-miR-192-5p Microarray 19074876
MIRT030518 hsa-miR-24-3p Microarray 19748357
MIRT047973 hsa-miR-30c-5p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
30
GO ID Ontology Definition Evidence Reference
GO:0004777 Function Succinate-semialdehyde dehydrogenase (NAD+) activity IBA
GO:0004777 Function Succinate-semialdehyde dehydrogenase (NAD+) activity IDA 9683595, 16199352
GO:0004777 Function Succinate-semialdehyde dehydrogenase (NAD+) activity IEA
GO:0004777 Function Succinate-semialdehyde dehydrogenase (NAD+) activity ISS 7814412
GO:0005739 Component Mitochondrion HDA 20833797
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
610045 408 ENSG00000112294
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P51649
Protein name Succinate-semialdehyde dehydrogenase, mitochondrial (EC 1.2.1.24) (Aldehyde dehydrogenase family 5 member A1) (NAD(+)-dependent succinic semialdehyde dehydrogenase)
Protein function Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA).
PDB 2W8N , 2W8O , 2W8P , 2W8Q , 2W8R
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00171 Aldedh 69 530 Aldehyde dehydrogenase family Family
Tissue specificity TISSUE SPECIFICITY: Brain, pancreas, heart, liver, skeletal muscle and kidney. Lower in placenta.
Sequence
Sequence length 535
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
22
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
ALDH5A1-related disorder Pathogenic; Likely pathogenic rs375628463, rs2532868287, rs751888532 RCV004745292
RCV003397772
RCV003396822
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Arthrogryposis multiplex congenita Likely pathogenic rs1581815207 RCV000855504
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Fetal akinesia deformation sequence 1 Likely pathogenic rs1581815207 RCV000855504
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Succinate-semialdehyde dehydrogenase deficiency Pathogenic; Likely pathogenic rs1397344379, rs1294269013, rs985818920, rs2127385894, rs2127387279, rs747336313, rs748170674, rs1759308366, rs906284769, rs2127379151, rs953870735, rs2127382929, rs2127387936, rs2127389582, rs1421988285
View all (112 more)
RCV001388775
RCV001383232
RCV001383086
RCV001383176
RCV001389230
View all (127 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
AUTISM SPECTRUM DISORDER CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTISM SPECTRUM DISORDERS Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BRAIN DISEASES, METABOLIC CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acquired Metabolic Diseases, Nervous System Nervous System Acquired Metabolic Diseases CTD_human_DG 17438226
★☆☆☆☆
Found in Text Mining only
Adult-Onset Dystonias Dystonia CTD_human_DG 17438226
★☆☆☆☆
Found in Text Mining only
Adult-Onset Idiopathic Focal Dystonias Dystonia CTD_human_DG 17438226
★☆☆☆☆
Found in Text Mining only
Adult-Onset Idiopathic Torsion Dystonias Dystonia CTD_human_DG 17438226
★☆☆☆☆
Found in Text Mining only
Age related macular degeneration Age-related macular degeneration BEFREE 25109799
★☆☆☆☆
Found in Text Mining only
Anxiety Anxiety Disorder HPO_DG
★☆☆☆☆
Found in Text Mining only
Autism Spectrum Disorder Autism Pubtator 32402538 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Autistic Disorder Autism HPO_DG
★☆☆☆☆
Found in Text Mining only
Autosomal Dominant Familial Dystonia Dystonia CTD_human_DG 17438226
★☆☆☆☆
Found in Text Mining only
Autosomal Recessive Familial Dystonia Dystonia CTD_human_DG 17438226
★☆☆☆☆
Found in Text Mining only