Gene Gene information from NCBI Gene database.
Entrez ID 2182
Gene name Acyl-CoA synthetase long chain family member 4
Gene symbol ACSL4
Synonyms (NCBI Gene)
ACS4FACL4LACS4MRX63MRX68XLID63
Chromosome X
Chromosome location Xq23
Summary The protein encoded by this gene is an isozyme of the long-chain fatty-acid-coenzyme A ligase family. Although differing in substrate specificity, subcellular localization, and tissue distribution, all isozymes of this family convert free long-chain fatty
SNPs SNP information provided by dbSNP.
7
SNP ID Visualize variation Clinical significance Consequence
rs122458138 G>T Pathogenic Coding sequence variant, missense variant
rs122458139 G>A Pathogenic Coding sequence variant, missense variant
rs183171123 T>C Conflicting-interpretations-of-pathogenicity, benign Intron variant
rs200451158 T>C Conflicting-interpretations-of-pathogenicity, likely-benign Missense variant, coding sequence variant
rs886042180 AT>- Pathogenic Frameshift variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
520
miRTarBase ID miRNA Experiments Reference
MIRT020060 hsa-miR-375 Microarray 20215506
MIRT025215 hsa-miR-34a-5p Proteomics 21566225
MIRT025215 hsa-miR-34a-5p Proteomics 21566225
MIRT025215 hsa-miR-34a-5p Proteomics 21566225
MIRT025215 hsa-miR-34a-5p Reporter assay;Proteomics 21566225
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
53
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0001676 Process Long-chain fatty acid metabolic process IBA
GO:0001676 Process Long-chain fatty acid metabolic process IDA 24269233
GO:0001676 Process Long-chain fatty acid metabolic process IEA
GO:0001676 Process Long-chain fatty acid metabolic process IMP 22633490
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
300157 3571 ENSG00000068366
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O60488
Protein name Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3) (Arachidonate--CoA ligase) (EC 6.2.1.15) (Long-chain acyl-CoA synthetase 4) (LACS 4)
Protein function Catalyzes the conversion of long-chain fatty acids to their active form acyl-CoA for both synthesis of cellular lipids, and degradation via beta-oxidation (PubMed:21242590, PubMed:22633490, PubMed:24269233). Preferentially activates arachidonate
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00501 AMP-binding 103 578 AMP-binding enzyme Family
Sequence
Sequence length 711
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
25
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Intellectual disability Likely pathogenic rs1603401125 RCV000850208
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Intellectual disability, X-linked 63 Pathogenic; Likely pathogenic rs2147437405, rs2147391497, rs2521078665, rs2521231477, rs122458138, rs1569423317, rs122458139, rs1924147806 RCV002210940
RCV002255236
RCV002290221
RCV002291087
RCV000012320
View all (3 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ACSL4-related disorder Uncertain significance; Conflicting classifications of pathogenicity; Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ARTHRITIS, EXPERIMENTAL CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Autism spectrum disorder Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTISM SPECTRUM DISORDERS Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
2-3 toe syndactyly Syndactyly Of The Toes HPO_DG
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 11731423
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma LHGDN 11731423
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of colon Adenocarcinoma Of Colon BEFREE 11731423, 12824887
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma CTD_human_DG 27602772
★☆☆☆☆
Found in Text Mining only
Adenoma Adenoma BEFREE 11731423
★☆☆☆☆
Found in Text Mining only
Adrenocortical Carcinoma Adrenocortical carcinoma Pubtator 35500219 Associate
★☆☆☆☆
Found in Text Mining only
Alport Syndrome Alport Syndrome BEFREE 10049589, 20186809, 9480748
★☆☆☆☆
Found in Text Mining only
Alport Syndrome, Mental Retardation, Midface Hypoplasia, and Elliptocytosis Amme complex BEFREE 10828604
★☆☆☆☆
Found in Text Mining only
Alport Syndrome, Mental Retardation, Midface Hypoplasia, and Elliptocytosis Amme complex GENOMICS_ENGLAND_DG 11889465
★☆☆☆☆
Found in Text Mining only