Gene Gene information from NCBI Gene database.
Entrez ID 9728
Gene name SECIS binding protein 2 like
Gene symbol SECISBP2L
Synonyms (NCBI Gene)
SBP2LSLAN
Chromosome 15
Chromosome location 15q21.1
miRNA miRNA information provided by mirtarbase database.
981
miRTarBase ID miRNA Experiments Reference
MIRT020145 hsa-miR-130b-3p Sequencing 20371350
MIRT025998 hsa-miR-148a-3p Sequencing 20371350
MIRT031119 hsa-miR-19b-3p Sequencing 20371350
MIRT437666 hsa-miR-21-5p MicroarrayqRT-PCR 22815788
MIRT437689 hsa-miR-223-3p MicroarrayqRT-PCR 22815788
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
8
GO ID Ontology Definition Evidence Reference
GO:0001514 Process Selenocysteine incorporation IEA
GO:0003723 Function RNA binding HDA 22658674, 22681889
GO:0003730 Function MRNA 3'-UTR binding IBA
GO:0005515 Function Protein binding IPI 25416956, 33961781
GO:0005739 Component Mitochondrion IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
615756 28997 ENSG00000138593
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q93073
Protein name Selenocysteine insertion sequence-binding protein 2-like (SECIS-binding protein 2-like)
Protein function Binds SECIS (Sec insertion sequence) elements present on selenocysteine (Sec) protein mRNAs, but does not promote Sec incorporation into selenoproteins in vitro.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01248 Ribosomal_L7Ae 702 804 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Domain
Sequence
MDRAPTEQNVKLSAEVEPFIPQKKSPDTFMIPMALPNDNGSVSGVEPTPIPSYLITCYPF
VQENQSNRQFPLYNNDIRWQQPNPNPTGPYFAYPIISAQPPVSTEYTYYQLMPAPCAQVM
GFYHPFPTPYSNTFQAANTVNAITTECTERPSQLGQVFPLSSHRSRNSNRGSVVPKQQLL
QQHIKSKRPLVKNVATQKETNAAGPDSRSKIVLLVDASQQTDFPSDIANKSLSETTATML
WKSKGRRRRASHPTAESSSEQGASEADIDSDSGYCSPKHSNNQPAAGALRNPDSGTMNHV
ESSMCAGGVNWSNVTCQATQKKPWMEKNQTFSRGGRQTEQRNNSQVGFRCRGHSTSSERR
QNLQKRPDNKHLSSSQSHRSDPNSESLYFEDEDGFQELNENGNAKDENIQQKLSSKVLDD
LPENSPINIVQTPIPITTSVPKRAKSQKKKALAAALATAQEYSEISMEQKKLQEALSKAA
GKKNKTPVQLDLGDMLAALEKQQQAMKARQITNTRPLSYTVVTAASFHTKDSTNRKPLTK
SQPCLTSFNSVDIASSKAKKGKEKEIAKLKRPTALKKVILKEREEKKGRLTVDHNLLGSE
EPTEMHLDFIDDLPQEIVSQEDTGLSMPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSP
MASSTITKIHSKRFREYCNQVLCKEIDECVTLLLQELVSFQERIYQKDPVRAKARRRLVM
GLREVTKHMKLNKIKCVIISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALG
RCVNKLVPVSVVGIFNYFGAESLF
NKLVELTEEARKAYKDMVAAMEQEQAEEALKNVKKV
PHHMGHSRNPSAASAISFCSVISEPISEVNEKEYETNWRNMVETSDGLEASENEKEVSCK
HSTSEKPSKLPFDTPPIGKQPSLVATGSTTSATSAGKSTASDKEEVKPDDLEWASQQSTE
TGSLDGSCRDLLNSSITSTTSTLVPGMLEEEEDEDEEEEEDYTHEPISVEVQLNSRIESW
VSETQRTMETLQLGKTLNGSEEDNVEQSGEEEAEAPEVLEPGMDSEAWTADQQASPGQQK
SSNCSSLNKEHSDSNYTTQTT
Sequence length 1101
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
7
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
LUNG ADENOCARCINOMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LUNG CANCER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LUNG CARCINOMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LUNG NEOPLASMS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Carcinoma of lung Lung carcinoma GWASCAT_DG 28604730
★☆☆☆☆
Found in Text Mining only
Glioma Glioma Pubtator 36768201 Associate
★☆☆☆☆
Found in Text Mining only
Lung Diseases Lung disease Pubtator 21566536 Associate
★☆☆☆☆
Found in Text Mining only
Lung Neoplasms Lung neoplasms Pubtator 21566536 Inhibit
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Lung Neoplasms Lung Neoplasms CTD_human_DG 28604730
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Lung Neoplasms Lung neoplasms Pubtator 31314582 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Lymphoma Lymphoma Pubtator 31919622 Associate
★☆☆☆☆
Found in Text Mining only
Malignant neoplasm of lung Lung Cancer CTD_human_DG 28604730
★☆☆☆☆
Found in Text Mining only
Neoplasms Neoplasms BEFREE 31314582
★☆☆☆☆
Found in Text Mining only
Neutropenia Neutropenia Pubtator 38039514 Associate
★☆☆☆☆
Found in Text Mining only