Gene Gene information from NCBI Gene database.
Entrez ID 967
Gene name CD63 molecule
Gene symbol CD63
Synonyms (NCBI Gene)
AD1HOP-26ME491MLA1OMA81HPltgp40TSPAN30
Chromosome 12
Chromosome location 12q13.2
Summary The protein encoded by this gene is a member of the transmembrane 4 superfamily, also known as the tetraspanin family. Most of these members are cell-surface proteins that are characterized by the presence of four hydrophobic domains. The proteins mediate
miRNA miRNA information provided by mirtarbase database.
60
miRTarBase ID miRNA Experiments Reference
MIRT023517 hsa-miR-1-3p Proteomics 18668040
MIRT052897 hsa-miR-3943 CLASH 23622248
MIRT525497 hsa-miR-6890-3p PAR-CLIP 22012620
MIRT525496 hsa-miR-1273g-3p PAR-CLIP 22012620
MIRT525495 hsa-miR-4763-5p PAR-CLIP 22012620
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
53
GO ID Ontology Definition Evidence Reference
GO:0002092 Process Positive regulation of receptor internalization IMP 23632027
GO:0005515 Function Protein binding IPI 16917503, 20374249, 25312088, 28030805, 32296183
GO:0005576 Component Extracellular region IEA
GO:0005615 Component Extracellular space IDA 25645918
GO:0005654 Component Nucleoplasm IDA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
155740 1692 ENSG00000135404
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P08962
Protein name CD63 antigen (Granulophysin) (Lysosomal-associated membrane protein 3) (LAMP-3) (Lysosome integral membrane protein 1) (Limp1) (Melanoma-associated antigen ME491) (OMA81H) (Ocular melanoma-associated antigen) (Tetraspanin-30) (Tspan-30) (CD antigen CD63)
Protein function Functions as a cell surface receptor for TIMP1 and plays a role in the activation of cellular signaling cascades. Plays a role in the activation of ITGB1 and integrin signaling, leading to the activation of AKT, FAK/PTK2 and MAP kinases. Promote
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00335 Tetraspanin 10 230 Tetraspanin family Family
Tissue specificity TISSUE SPECIFICITY: Detected in platelets (at protein level). Dysplastic nevi, radial growth phase primary melanomas, hematopoietic cells, tissue macrophages. {ECO:0000269|PubMed:19640571}.
Sequence
Sequence length 238
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Virion - Hepatitis viruses
Lysosome
Proteoglycans in cancer
  Platelet degranulation
Neutrophil degranulation
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
4
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
LIVER CIRRHOSIS, EXPERIMENTAL CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LIVER NEOPLASMS, EXPERIMENTAL CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
NIGHT BLINDNESS, CONGENITAL STATIONARY Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
RETINITIS PUNCTATA ALBESCENS Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma Adenocarcinoma LHGDN 17350713
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 9761121
★☆☆☆☆
Found in Text Mining only
Adult Hodgkin Lymphoma Hodgkin Lymphoma BEFREE 27974566
★☆☆☆☆
Found in Text Mining only
Allergic sensitization Allergic Sensitization BEFREE 27518369, 29702283
★☆☆☆☆
Found in Text Mining only
Anemia, Sickle Cell Anemia BEFREE 21245745
★☆☆☆☆
Found in Text Mining only
Angina Pectoris Angina pectoris Pubtator 16856976 Stimulate
★☆☆☆☆
Found in Text Mining only
Angina Stable Angina pectoris Pubtator 35942210 Stimulate
★☆☆☆☆
Found in Text Mining only
ANOPHTHALMIA AND PULMONARY HYPOPLASIA Syndromic microphthalmia BEFREE 29570265
★☆☆☆☆
Found in Text Mining only
Antiphospholipid Syndrome Antiphospholipid syndrome Pubtator 11703349 Stimulate
★☆☆☆☆
Found in Text Mining only
Arthritis Rheumatoid Rheumatoid arthritis Pubtator 36826611, 7621589 Associate
★☆☆☆☆
Found in Text Mining only