Gene Gene information from NCBI Gene database.
Entrez ID 949
Gene name Scavenger receptor class B member 1
Gene symbol SCARB1
Synonyms (NCBI Gene)
CD36L1CLA-1CLA1HDLCQ6HDLQTL6SR-BISRB1
Chromosome 12
Chromosome location 12q24.31
Summary The protein encoded by this gene is a plasma membrane receptor for high density lipoprotein cholesterol (HDL). The encoded protein mediates cholesterol transfer to and from HDL. In addition, this protein is a receptor for hepatitis C virus glycoprotein E2
SNPs SNP information provided by dbSNP.
1
SNP ID Visualize variation Clinical significance Consequence
rs74830677 G>A Pathogenic Missense variant, intron variant, non coding transcript variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
89
miRTarBase ID miRNA Experiments Reference
MIRT035549 hsa-miR-185-5p Luciferase reporter assay 23459944
MIRT035549 hsa-miR-185-5p Luciferase reporter assay 23459944
MIRT035549 hsa-miR-185-5p Luciferase reporter assay 23459944
MIRT035550 hsa-miR-96-5p Luciferase reporter assay 23459944
MIRT035551 hsa-miR-223-3p Luciferase reporter assay 23459944
Transcription factors Transcription factors information provided by TRRUST V2 database.
4
Transcription factor Regulation Reference
NR1H4 Activation 20956002
SPI1 Unknown 8007948
STAT1 Unknown 17998316
STAT2 Unknown 17998316
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
82
GO ID Ontology Definition Evidence Reference
GO:0001530 Function Lipopolysaccharide binding IDA 12651854
GO:0001540 Function Amyloid-beta binding IEA
GO:0001618 Function Virus receptor activity IEA
GO:0001786 Function Phosphatidylserine binding ISS
GO:0001875 Function Lipopolysaccharide immune receptor activity IDA 12651854
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601040 1664 ENSG00000073060
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q8WTV0
Protein name Scavenger receptor class B member 1 (SRB1) (CD36 and LIMPII analogous 1) (CLA-1) (CD36 antigen-like 1) (Collagen type I receptor, thrombospondin receptor-like 1) (SR-BI) (CD antigen CD36)
Protein function Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells (PubMed:12016218, PubMed:12519372, PubMed:21226579). Receptor for HDL, mediating selective uptake of cholesteryl ether
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01130 CD36 16 463 CD36 family Family
Tissue specificity TISSUE SPECIFICITY: Widely expressed.
Sequence
Sequence length 552
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Virion - Hepatitis viruses
Phagosome
Ovarian steroidogenesis
Aldosterone synthesis and secretion
Cortisol synthesis and secretion
Cushing syndrome
Fat digestion and absorption
Bile secretion
Vitamin digestion and absorption
Cholesterol metabolism
Hepatitis C
  Scavenging by Class B Receptors
HDL clearance
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
46
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
HIGH DENSITY LIPOPROTEIN CHOLESTEROL LEVEL QUANTITATIVE TRAIT LOCUS 6 Pathogenic rs201068540 RCV001813912
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Adrenocortical carcinoma, hereditary Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ALZHEIMER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CANNABIS ABUSE Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute Coronary Syndrome Coronary Syndrome GWASCAT_DG 28753643
★☆☆☆☆
Found in Text Mining only
Adenoma Adenoma BEFREE 10426565
★☆☆☆☆
Found in Text Mining only
Adrenal Cortical Adenoma Adrenocortical adenoma BEFREE 9253328
★☆☆☆☆
Found in Text Mining only
Adrenal Gland Pheochromocytoma Adrenal Gland Pheochromocytoma BEFREE 10426565, 30049837, 30300539, 9253328
★☆☆☆☆
Found in Text Mining only
Adrenocortical Carcinoma Adrenocortical carcinoma Pubtator 10426565 Associate
★☆☆☆☆
Found in Text Mining only
Adrenocortical carcinoma Adrenocortical carcinoma BEFREE 9253328
★☆☆☆☆
Found in Text Mining only
Adult Medulloblastoma Medulloblastoma BEFREE 29352211
★☆☆☆☆
Found in Text Mining only
Age related macular degeneration Age-related macular degeneration BEFREE 19806217, 24346170, 27428740
★☆☆☆☆
Found in Text Mining only
Alagille Syndrome Alagille syndrome Pubtator 15210845 Associate
★☆☆☆☆
Found in Text Mining only
Alzheimer`s Disease Alzheimer disease GWASCAT_DG 30805717
★☆☆☆☆
Found in Text Mining only