CRIPT (CXXC repeat containing interactor of PDZ3 domain)

Gene

• Entrez ID: 9419
• Gene name: CXXC repeat containing interactor of PDZ3 domain
• Gene symbol: CRIPT
• Synonyms (NCBI Gene): HSPC139, RTS3, SSMDF
• Chromosome: 2
• Chromosome location: 2p21
• Summary: This gene encodes a protein that binds to the PDZ3 peptide recognition domain. The encoded protein may modulates protein interactions with the cytoskeleton. A mutation in this gene resulted in short stature with microcephaly and distinctive facies. [provi

SNPs

SNP ID	Visualize variation	Clinical significance	Consequence
rs587779348	T>-	Pathogenic	Coding sequence variant, frameshift variant
rs587779356	->GG	Pathogenic	Coding sequence variant, frameshift variant

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT711911	hsa-miR-1277-5p	HITS-CLIP	19536157
MIRT711910	hsa-miR-656-3p	HITS-CLIP	19536157
MIRT711909	hsa-miR-486-5p	HITS-CLIP	19536157
MIRT711908	hsa-miR-4742-3p	HITS-CLIP	19536157
MIRT711907	hsa-miR-3671	HITS-CLIP	19536157
MIRT711906	hsa-miR-607	HITS-CLIP	19536157
MIRT711905	hsa-miR-1305	HITS-CLIP	19536157
MIRT711904	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT711911	hsa-miR-1277-5p	HITS-CLIP	19536157
MIRT711910	hsa-miR-656-3p	HITS-CLIP	19536157
MIRT711909	hsa-miR-486-5p	HITS-CLIP	19536157
MIRT711908	hsa-miR-4742-3p	HITS-CLIP	19536157
MIRT711907	hsa-miR-3671	HITS-CLIP	19536157
MIRT711906	hsa-miR-607	HITS-CLIP	19536157
MIRT711905	hsa-miR-1305	HITS-CLIP	19536157
MIRT711904	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT711911	hsa-miR-1277-5p	HITS-CLIP	19536157
MIRT711910	hsa-miR-656-3p	HITS-CLIP	19536157
MIRT711909	hsa-miR-486-5p	HITS-CLIP	19536157
MIRT711908	hsa-miR-4742-3p	HITS-CLIP	19536157
MIRT711907	hsa-miR-3671	HITS-CLIP	19536157
MIRT711906	hsa-miR-607	HITS-CLIP	19536157
MIRT711905	hsa-miR-1305	HITS-CLIP	19536157
MIRT711904	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT711911	hsa-miR-1277-5p	HITS-CLIP	19536157
MIRT711910	hsa-miR-656-3p	HITS-CLIP	19536157
MIRT711909	hsa-miR-486-5p	HITS-CLIP	19536157
MIRT711908	hsa-miR-4742-3p	HITS-CLIP	19536157
MIRT711907	hsa-miR-3671	HITS-CLIP	19536157
MIRT711906	hsa-miR-607	HITS-CLIP	19536157
MIRT711905	hsa-miR-1305	HITS-CLIP	19536157
MIRT711904	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT707654	hsa-miR-548n	HITS-CLIP	21572407
MIRT707653	hsa-miR-548az-5p	HITS-CLIP	21572407
MIRT707652	hsa-miR-548t-5p	HITS-CLIP	21572407
MIRT707651	hsa-miR-548av-5p	HITS-CLIP	21572407
MIRT707650	hsa-miR-548k	HITS-CLIP	21572407
MIRT707649	hsa-miR-8054	HITS-CLIP	21572407
MIRT707648	hsa-miR-6732-3p	HITS-CLIP	21572407
MIRT707647	hsa-miR-10a-5p	HITS-CLIP	21572407
MIRT707646	hsa-miR-10b-5p	HITS-CLIP	21572407
MIRT707645	hsa-miR-624-5p	HITS-CLIP	21572407
MIRT707644	hsa-miR-339-5p	HITS-CLIP	21572407
MIRT707643	hsa-miR-4421	HITS-CLIP	21572407
MIRT707642	hsa-miR-5699-3p	HITS-CLIP	21572407
MIRT707641	hsa-miR-6895-3p	HITS-CLIP	21572407
MIRT707640	hsa-miR-593-3p	HITS-CLIP	21572407
MIRT707639	hsa-miR-4684-5p	HITS-CLIP	21572407
MIRT707638	hsa-miR-6818-3p	HITS-CLIP	21572407
MIRT696620	hsa-miR-510-5p	HITS-CLIP	23313552
MIRT696619	hsa-miR-4695-5p	HITS-CLIP	23313552
MIRT696618	hsa-miR-4768-3p	HITS-CLIP	23313552
MIRT696617	hsa-miR-4459	HITS-CLIP	23313552
MIRT696616	hsa-miR-4433a-3p	HITS-CLIP	23313552
MIRT696615	hsa-miR-1247-3p	HITS-CLIP	23313552
MIRT696614	hsa-miR-3664-3p	HITS-CLIP	23313552
MIRT696613	hsa-miR-485-5p	HITS-CLIP	23313552
MIRT696612	hsa-miR-6884-5p	HITS-CLIP	23313552
MIRT696611	hsa-miR-4722-5p	HITS-CLIP	23313552
MIRT696610	hsa-miR-4731-5p	HITS-CLIP	23313552
MIRT696609	hsa-miR-4505	HITS-CLIP	23313552
MIRT696608	hsa-miR-5787	HITS-CLIP	23313552
MIRT696607	hsa-miR-6721-5p	HITS-CLIP	23313552
MIRT696606	hsa-miR-486-3p	HITS-CLIP	23313552
MIRT665097	hsa-miR-383-3p	HITS-CLIP	23824327
MIRT665096	hsa-miR-5693	HITS-CLIP	23824327
MIRT665095	hsa-miR-1825	HITS-CLIP	23824327
MIRT665094	hsa-miR-199a-5p	HITS-CLIP	23824327
MIRT665093	hsa-miR-199b-5p	HITS-CLIP	23824327
MIRT665092	hsa-miR-4284	HITS-CLIP	23824327
MIRT665091	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT665090	hsa-miR-7106-5p	HITS-CLIP	23824327
MIRT665089	hsa-miR-149-3p	HITS-CLIP	23824327
MIRT665088	hsa-miR-4728-5p	HITS-CLIP	23824327
MIRT665087	hsa-miR-6785-5p	HITS-CLIP	23824327
MIRT665086	hsa-miR-6883-5p	HITS-CLIP	23824327
MIRT665085	hsa-miR-6799-5p	HITS-CLIP	23824327
MIRT665084	hsa-miR-7977	HITS-CLIP	23824327
MIRT665083	hsa-miR-30c-1-3p	HITS-CLIP	23824327
MIRT665082	hsa-miR-30c-2-3p	HITS-CLIP	23824327
MIRT665081	hsa-miR-6788-5p	HITS-CLIP	23824327
MIRT665080	hsa-miR-1273h-5p	HITS-CLIP	23824327
MIRT665079	hsa-miR-30b-3p	HITS-CLIP	23824327
MIRT665078	hsa-miR-3689a-3p	HITS-CLIP	23824327
MIRT665077	hsa-miR-3689b-3p	HITS-CLIP	23824327
MIRT665076	hsa-miR-3689c	HITS-CLIP	23824327
MIRT665075	hsa-miR-6779-5p	HITS-CLIP	23824327
MIRT665074	hsa-miR-6780a-5p	HITS-CLIP	23824327
MIRT665073	hsa-miR-450a-1-3p	HITS-CLIP	23824327
MIRT665072	hsa-miR-3122	HITS-CLIP	23824327
MIRT665071	hsa-miR-3913-5p	HITS-CLIP	23824327
MIRT665070	hsa-miR-887-5p	HITS-CLIP	23824327
MIRT665069	hsa-miR-6513-5p	HITS-CLIP	23824327
MIRT665068	hsa-miR-665	HITS-CLIP	23824327
MIRT638016	hsa-miR-4494	HITS-CLIP	23824327
MIRT638014	hsa-miR-499b-5p	HITS-CLIP	23824327
MIRT638015	hsa-miR-153-3p	HITS-CLIP	23824327
MIRT638013	hsa-miR-448	HITS-CLIP	23824327
MIRT638012	hsa-miR-450b-5p	HITS-CLIP	23824327
MIRT638011	hsa-miR-507	HITS-CLIP	23824327
MIRT638010	hsa-miR-557	HITS-CLIP	23824327
MIRT638009	hsa-miR-3680-3p	HITS-CLIP	23824327
MIRT638008	hsa-miR-129-5p	HITS-CLIP	23824327
MIRT442614	hsa-miR-548as-3p	PAR-CLIP	22100165
MIRT442613	hsa-miR-548u	PAR-CLIP	22100165
MIRT442611	hsa-miR-7161-5p	PAR-CLIP	22100165
MIRT442612	hsa-miR-1273d	PAR-CLIP	22100165
MIRT442610	hsa-miR-660-5p	PAR-CLIP	22100165
MIRT711911	hsa-miR-1277-5p	HITS-CLIP	19536157
MIRT711910	hsa-miR-656-3p	HITS-CLIP	19536157
MIRT711909	hsa-miR-486-5p	HITS-CLIP	19536157
MIRT711908	hsa-miR-4742-3p	HITS-CLIP	19536157
MIRT711907	hsa-miR-3671	HITS-CLIP	19536157
MIRT711906	hsa-miR-607	HITS-CLIP	19536157
MIRT711905	hsa-miR-1305	HITS-CLIP	19536157
MIRT711904	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT711911	hsa-miR-1277-5p	HITS-CLIP	19536157
MIRT711910	hsa-miR-656-3p	HITS-CLIP	19536157
MIRT711909	hsa-miR-486-5p	HITS-CLIP	19536157
MIRT711908	hsa-miR-4742-3p	HITS-CLIP	19536157
MIRT711907	hsa-miR-3671	HITS-CLIP	19536157
MIRT711906	hsa-miR-607	HITS-CLIP	19536157
MIRT711905	hsa-miR-1305	HITS-CLIP	19536157
MIRT711904	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT711911	hsa-miR-1277-5p	HITS-CLIP	19536157
MIRT711910	hsa-miR-656-3p	HITS-CLIP	19536157
MIRT711909	hsa-miR-486-5p	HITS-CLIP	19536157
MIRT711908	hsa-miR-4742-3p	HITS-CLIP	19536157
MIRT711907	hsa-miR-3671	HITS-CLIP	19536157
MIRT711906	hsa-miR-607	HITS-CLIP	19536157
MIRT711905	hsa-miR-1305	HITS-CLIP	19536157
MIRT711904	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT711911	hsa-miR-1277-5p	HITS-CLIP	19536157
MIRT711910	hsa-miR-656-3p	HITS-CLIP	19536157
MIRT711909	hsa-miR-486-5p	HITS-CLIP	19536157
MIRT711908	hsa-miR-4742-3p	HITS-CLIP	19536157
MIRT711907	hsa-miR-3671	HITS-CLIP	19536157
MIRT711906	hsa-miR-607	HITS-CLIP	19536157
MIRT711905	hsa-miR-1305	HITS-CLIP	19536157
MIRT711904	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT707654	hsa-miR-548n	HITS-CLIP	21572407
MIRT707653	hsa-miR-548az-5p	HITS-CLIP	21572407
MIRT707652	hsa-miR-548t-5p	HITS-CLIP	21572407
MIRT707651	hsa-miR-548av-5p	HITS-CLIP	21572407
MIRT707650	hsa-miR-548k	HITS-CLIP	21572407
MIRT707649	hsa-miR-8054	HITS-CLIP	21572407
MIRT707648	hsa-miR-6732-3p	HITS-CLIP	21572407
MIRT707647	hsa-miR-10a-5p	HITS-CLIP	21572407
MIRT707646	hsa-miR-10b-5p	HITS-CLIP	21572407
MIRT707645	hsa-miR-624-5p	HITS-CLIP	21572407
MIRT707644	hsa-miR-339-5p	HITS-CLIP	21572407
MIRT707643	hsa-miR-4421	HITS-CLIP	21572407
MIRT707642	hsa-miR-5699-3p	HITS-CLIP	21572407
MIRT707641	hsa-miR-6895-3p	HITS-CLIP	21572407
MIRT707640	hsa-miR-593-3p	HITS-CLIP	21572407
MIRT707639	hsa-miR-4684-5p	HITS-CLIP	21572407
MIRT707638	hsa-miR-6818-3p	HITS-CLIP	21572407
MIRT696620	hsa-miR-510-5p	HITS-CLIP	23313552
MIRT696619	hsa-miR-4695-5p	HITS-CLIP	23313552
MIRT696618	hsa-miR-4768-3p	HITS-CLIP	23313552
MIRT696617	hsa-miR-4459	HITS-CLIP	23313552
MIRT696616	hsa-miR-4433a-3p	HITS-CLIP	23313552
MIRT696615	hsa-miR-1247-3p	HITS-CLIP	23313552
MIRT696614	hsa-miR-3664-3p	HITS-CLIP	23313552
MIRT696613	hsa-miR-485-5p	HITS-CLIP	23313552
MIRT696612	hsa-miR-6884-5p	HITS-CLIP	23313552
MIRT696611	hsa-miR-4722-5p	HITS-CLIP	23313552
MIRT696610	hsa-miR-4731-5p	HITS-CLIP	23313552
MIRT696609	hsa-miR-4505	HITS-CLIP	23313552
MIRT696608	hsa-miR-5787	HITS-CLIP	23313552
MIRT696607	hsa-miR-6721-5p	HITS-CLIP	23313552
MIRT696606	hsa-miR-486-3p	HITS-CLIP	23313552
MIRT665097	hsa-miR-383-3p	HITS-CLIP	23824327
MIRT665096	hsa-miR-5693	HITS-CLIP	23824327
MIRT665095	hsa-miR-1825	HITS-CLIP	23824327
MIRT665094	hsa-miR-199a-5p	HITS-CLIP	23824327
MIRT665093	hsa-miR-199b-5p	HITS-CLIP	23824327
MIRT665092	hsa-miR-4284	HITS-CLIP	23824327
MIRT665091	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT665090	hsa-miR-7106-5p	HITS-CLIP	23824327
MIRT665089	hsa-miR-149-3p	HITS-CLIP	23824327
MIRT665088	hsa-miR-4728-5p	HITS-CLIP	23824327
MIRT665087	hsa-miR-6785-5p	HITS-CLIP	23824327
MIRT665086	hsa-miR-6883-5p	HITS-CLIP	23824327
MIRT665085	hsa-miR-6799-5p	HITS-CLIP	23824327
MIRT665084	hsa-miR-7977	HITS-CLIP	23824327
MIRT665083	hsa-miR-30c-1-3p	HITS-CLIP	23824327
MIRT665082	hsa-miR-30c-2-3p	HITS-CLIP	23824327
MIRT665081	hsa-miR-6788-5p	HITS-CLIP	23824327
MIRT665080	hsa-miR-1273h-5p	HITS-CLIP	23824327
MIRT665079	hsa-miR-30b-3p	HITS-CLIP	23824327
MIRT665078	hsa-miR-3689a-3p	HITS-CLIP	23824327
MIRT665077	hsa-miR-3689b-3p	HITS-CLIP	23824327
MIRT665076	hsa-miR-3689c	HITS-CLIP	23824327
MIRT665075	hsa-miR-6779-5p	HITS-CLIP	23824327
MIRT665074	hsa-miR-6780a-5p	HITS-CLIP	23824327
MIRT665073	hsa-miR-450a-1-3p	HITS-CLIP	23824327
MIRT665072	hsa-miR-3122	HITS-CLIP	23824327
MIRT665071	hsa-miR-3913-5p	HITS-CLIP	23824327
MIRT665070	hsa-miR-887-5p	HITS-CLIP	23824327
MIRT665069	hsa-miR-6513-5p	HITS-CLIP	23824327
MIRT665068	hsa-miR-665	HITS-CLIP	23824327
MIRT638016	hsa-miR-4494	HITS-CLIP	23824327
MIRT638014	hsa-miR-499b-5p	HITS-CLIP	23824327
MIRT638015	hsa-miR-153-3p	HITS-CLIP	23824327
MIRT638013	hsa-miR-448	HITS-CLIP	23824327
MIRT638012	hsa-miR-450b-5p	HITS-CLIP	23824327
MIRT638011	hsa-miR-507	HITS-CLIP	23824327
MIRT638010	hsa-miR-557	HITS-CLIP	23824327
MIRT638009	hsa-miR-3680-3p	HITS-CLIP	23824327
MIRT638008	hsa-miR-129-5p	HITS-CLIP	23824327
MIRT442614	hsa-miR-548as-3p	PAR-CLIP	22100165
MIRT442613	hsa-miR-548u	PAR-CLIP	22100165
MIRT442611	hsa-miR-7161-5p	PAR-CLIP	22100165
MIRT442612	hsa-miR-1273d	PAR-CLIP	22100165
MIRT442610	hsa-miR-660-5p	PAR-CLIP	22100165
MIRT909765	hsa-miR-1226	CLIP-seq
MIRT909766	hsa-miR-2116	CLIP-seq
MIRT909767	hsa-miR-3064-3p	CLIP-seq
MIRT909768	hsa-miR-3168	CLIP-seq
MIRT909769	hsa-miR-425	CLIP-seq
MIRT909770	hsa-miR-4252	CLIP-seq
MIRT909771	hsa-miR-4282	CLIP-seq
MIRT909772	hsa-miR-4715-3p	CLIP-seq
MIRT909773	hsa-miR-4776-3p	CLIP-seq
MIRT909774	hsa-miR-490-5p	CLIP-seq
MIRT909775	hsa-miR-576-5p	CLIP-seq
MIRT909776	hsa-miR-634	CLIP-seq
MIRT1969642	hsa-miR-1208	CLIP-seq
MIRT1969643	hsa-miR-1229	CLIP-seq
MIRT1969644	hsa-miR-1273e	CLIP-seq
MIRT1969645	hsa-miR-3175	CLIP-seq
MIRT1969646	hsa-miR-3184	CLIP-seq
MIRT1969647	hsa-miR-326	CLIP-seq
MIRT1969648	hsa-miR-330-5p	CLIP-seq
MIRT1969649	hsa-miR-383	CLIP-seq
MIRT1969650	hsa-miR-3973	CLIP-seq
MIRT1969651	hsa-miR-423-5p	CLIP-seq
MIRT1969652	hsa-miR-4764-3p	CLIP-seq
MIRT1969653	hsa-miR-4773	CLIP-seq
MIRT1969654	hsa-miR-4782-5p	CLIP-seq
MIRT1969655	hsa-miR-539	CLIP-seq
MIRT1969656	hsa-miR-548l	CLIP-seq
MIRT1969657	hsa-miR-618	CLIP-seq
MIRT1969658	hsa-miR-802	CLIP-seq
MIRT909765	hsa-miR-1226	CLIP-seq
MIRT2205764	hsa-miR-2114	CLIP-seq
MIRT2205765	hsa-miR-2355-5p	CLIP-seq
MIRT1969645	hsa-miR-3175	CLIP-seq
MIRT1969646	hsa-miR-3184	CLIP-seq
MIRT1969651	hsa-miR-423-5p	CLIP-seq
MIRT1969652	hsa-miR-4764-3p	CLIP-seq
MIRT1969654	hsa-miR-4782-5p	CLIP-seq
MIRT1969655	hsa-miR-539	CLIP-seq
MIRT1969657	hsa-miR-618	CLIP-seq
MIRT909776	hsa-miR-634	CLIP-seq
MIRT1969642	hsa-miR-1208	CLIP-seq
MIRT2386467	hsa-miR-141	CLIP-seq
MIRT2386468	hsa-miR-200a	CLIP-seq
MIRT2508839	hsa-miR-106a	CLIP-seq
MIRT2508840	hsa-miR-106b	CLIP-seq
MIRT1969642	hsa-miR-1208	CLIP-seq
MIRT909765	hsa-miR-1226	CLIP-seq
MIRT2508841	hsa-miR-1228	CLIP-seq
MIRT1969643	hsa-miR-1229	CLIP-seq
MIRT2508842	hsa-miR-1237	CLIP-seq
MIRT2508843	hsa-miR-1248	CLIP-seq
MIRT1969644	hsa-miR-1273e	CLIP-seq
MIRT2508844	hsa-miR-1285	CLIP-seq
MIRT2508845	hsa-miR-135a	CLIP-seq
MIRT2508846	hsa-miR-135b	CLIP-seq
MIRT2386467	hsa-miR-141	CLIP-seq
MIRT2508847	hsa-miR-142-5p	CLIP-seq
MIRT2508848	hsa-miR-154	CLIP-seq
MIRT2508849	hsa-miR-17	CLIP-seq
MIRT2508850	hsa-miR-186	CLIP-seq
MIRT2508851	hsa-miR-193a-5p	CLIP-seq
MIRT2386468	hsa-miR-200a	CLIP-seq
MIRT2508852	hsa-miR-20a	CLIP-seq
MIRT2508853	hsa-miR-20b	CLIP-seq
MIRT909766	hsa-miR-2116	CLIP-seq
MIRT2508854	hsa-miR-2276	CLIP-seq
MIRT2508855	hsa-miR-3129-3p	CLIP-seq
MIRT2508856	hsa-miR-3130-3p	CLIP-seq
MIRT2508857	hsa-miR-3133	CLIP-seq
MIRT909768	hsa-miR-3168	CLIP-seq
MIRT2508858	hsa-miR-3174	CLIP-seq
MIRT1969645	hsa-miR-3175	CLIP-seq
MIRT1969646	hsa-miR-3184	CLIP-seq
MIRT2508859	hsa-miR-3187-5p	CLIP-seq
MIRT2508860	hsa-miR-3609	CLIP-seq
MIRT2508861	hsa-miR-3620	CLIP-seq
MIRT2508862	hsa-miR-3663-5p	CLIP-seq
MIRT2508863	hsa-miR-3670	CLIP-seq
MIRT2508864	hsa-miR-3675-3p	CLIP-seq
MIRT2508865	hsa-miR-3713	CLIP-seq
MIRT1969649	hsa-miR-383	CLIP-seq
MIRT2508866	hsa-miR-3929	CLIP-seq
MIRT2508867	hsa-miR-3942-5p	CLIP-seq
MIRT1969650	hsa-miR-3973	CLIP-seq
MIRT1969651	hsa-miR-423-5p	CLIP-seq
MIRT909770	hsa-miR-4252	CLIP-seq
MIRT2508868	hsa-miR-4263	CLIP-seq
MIRT2508869	hsa-miR-4276	CLIP-seq
MIRT909771	hsa-miR-4282	CLIP-seq
MIRT2508870	hsa-miR-4291	CLIP-seq
MIRT2508871	hsa-miR-4292	CLIP-seq
MIRT2508872	hsa-miR-4302	CLIP-seq
MIRT2508873	hsa-miR-4307	CLIP-seq
MIRT2508874	hsa-miR-433	CLIP-seq
MIRT2508875	hsa-miR-4419b	CLIP-seq
MIRT2508876	hsa-miR-4447	CLIP-seq
MIRT2508877	hsa-miR-4452	CLIP-seq
MIRT2508878	hsa-miR-4453	CLIP-seq
MIRT2508879	hsa-miR-4472	CLIP-seq
MIRT2508880	hsa-miR-4478	CLIP-seq
MIRT2508881	hsa-miR-4517	CLIP-seq
MIRT2508882	hsa-miR-4538	CLIP-seq
MIRT2508883	hsa-miR-4649-3p	CLIP-seq
MIRT2508884	hsa-miR-4661-5p	CLIP-seq
MIRT2508885	hsa-miR-4696	CLIP-seq
MIRT2508886	hsa-miR-4703-5p	CLIP-seq
MIRT2508887	hsa-miR-4723-5p	CLIP-seq
MIRT2508888	hsa-miR-4729	CLIP-seq
MIRT2508889	hsa-miR-4733-5p	CLIP-seq
MIRT2508890	hsa-miR-4744	CLIP-seq
MIRT1969652	hsa-miR-4764-3p	CLIP-seq
MIRT1969653	hsa-miR-4773	CLIP-seq
MIRT1969654	hsa-miR-4782-5p	CLIP-seq
MIRT2508891	hsa-miR-4793-3p	CLIP-seq
MIRT2508892	hsa-miR-4796-3p	CLIP-seq
MIRT2508893	hsa-miR-4797-5p	CLIP-seq
MIRT2508894	hsa-miR-4799-5p	CLIP-seq
MIRT2508895	hsa-miR-487a	CLIP-seq
MIRT2508896	hsa-miR-494	CLIP-seq
MIRT2508897	hsa-miR-519d	CLIP-seq
MIRT2508898	hsa-miR-520g	CLIP-seq
MIRT2508899	hsa-miR-520h	CLIP-seq
MIRT1969655	hsa-miR-539	CLIP-seq
MIRT2508900	hsa-miR-541	CLIP-seq
MIRT2508901	hsa-miR-545	CLIP-seq
MIRT2508902	hsa-miR-548a-5p	CLIP-seq
MIRT2508903	hsa-miR-548ab	CLIP-seq
MIRT2508904	hsa-miR-548ac	CLIP-seq
MIRT2508905	hsa-miR-548ae	CLIP-seq
MIRT2508906	hsa-miR-548ah	CLIP-seq
MIRT2508907	hsa-miR-548aj	CLIP-seq
MIRT2508908	hsa-miR-548ak	CLIP-seq
MIRT2508909	hsa-miR-548am	CLIP-seq
MIRT2508910	hsa-miR-548b-3p	CLIP-seq
MIRT2508911	hsa-miR-548b-5p	CLIP-seq
MIRT2508912	hsa-miR-548c-3p	CLIP-seq
MIRT2508913	hsa-miR-548c-5p	CLIP-seq
MIRT2508914	hsa-miR-548d-3p	CLIP-seq
MIRT2508915	hsa-miR-548d-5p	CLIP-seq
MIRT2508916	hsa-miR-548h	CLIP-seq
MIRT2508917	hsa-miR-548i	CLIP-seq
MIRT2508918	hsa-miR-548j	CLIP-seq
MIRT1969656	hsa-miR-548l	CLIP-seq
MIRT2508919	hsa-miR-548w	CLIP-seq
MIRT2508920	hsa-miR-548x	CLIP-seq
MIRT2508921	hsa-miR-548y	CLIP-seq
MIRT2508922	hsa-miR-548z	CLIP-seq
MIRT2508923	hsa-miR-559	CLIP-seq
MIRT909775	hsa-miR-576-5p	CLIP-seq
MIRT2508924	hsa-miR-582-3p	CLIP-seq
MIRT2508925	hsa-miR-601	CLIP-seq
MIRT2508926	hsa-miR-604	CLIP-seq
MIRT2508927	hsa-miR-605	CLIP-seq
MIRT2508928	hsa-miR-612	CLIP-seq
MIRT1969657	hsa-miR-618	CLIP-seq
MIRT909776	hsa-miR-634	CLIP-seq
MIRT2508929	hsa-miR-635	CLIP-seq
MIRT2508930	hsa-miR-643	CLIP-seq
MIRT2508931	hsa-miR-647	CLIP-seq
MIRT2508932	hsa-miR-654-5p	CLIP-seq
MIRT2508933	hsa-miR-759	CLIP-seq
MIRT2508934	hsa-miR-875-5p	CLIP-seq
MIRT2508935	hsa-miR-921	CLIP-seq
MIRT2508936	hsa-miR-93	CLIP-seq
MIRT2508839	hsa-miR-106a	CLIP-seq
MIRT2508840	hsa-miR-106b	CLIP-seq
MIRT1969642	hsa-miR-1208	CLIP-seq
MIRT909765	hsa-miR-1226	CLIP-seq
MIRT2508841	hsa-miR-1228	CLIP-seq
MIRT1969643	hsa-miR-1229	CLIP-seq
MIRT2508842	hsa-miR-1237	CLIP-seq
MIRT2508843	hsa-miR-1248	CLIP-seq
MIRT1969644	hsa-miR-1273e	CLIP-seq
MIRT2508844	hsa-miR-1285	CLIP-seq
MIRT2508845	hsa-miR-135a	CLIP-seq
MIRT2508846	hsa-miR-135b	CLIP-seq
MIRT2386467	hsa-miR-141	CLIP-seq
MIRT2508847	hsa-miR-142-5p	CLIP-seq
MIRT2508848	hsa-miR-154	CLIP-seq
MIRT2508849	hsa-miR-17	CLIP-seq
MIRT2508850	hsa-miR-186	CLIP-seq
MIRT2508851	hsa-miR-193a-5p	CLIP-seq
MIRT2386468	hsa-miR-200a	CLIP-seq
MIRT2508852	hsa-miR-20a	CLIP-seq
MIRT2508853	hsa-miR-20b	CLIP-seq
MIRT2508854	hsa-miR-2276	CLIP-seq
MIRT2508855	hsa-miR-3129-3p	CLIP-seq
MIRT2508856	hsa-miR-3130-3p	CLIP-seq
MIRT2508857	hsa-miR-3133	CLIP-seq
MIRT2508858	hsa-miR-3174	CLIP-seq
MIRT1969645	hsa-miR-3175	CLIP-seq
MIRT1969646	hsa-miR-3184	CLIP-seq
MIRT2508859	hsa-miR-3187-5p	CLIP-seq
MIRT2508860	hsa-miR-3609	CLIP-seq
MIRT2678634	hsa-miR-3613-3p	CLIP-seq
MIRT2508861	hsa-miR-3620	CLIP-seq
MIRT2508862	hsa-miR-3663-5p	CLIP-seq
MIRT2508863	hsa-miR-3670	CLIP-seq
MIRT2508864	hsa-miR-3675-3p	CLIP-seq
MIRT2508865	hsa-miR-3713	CLIP-seq
MIRT1969649	hsa-miR-383	CLIP-seq
MIRT2508866	hsa-miR-3929	CLIP-seq
MIRT2508867	hsa-miR-3942-5p	CLIP-seq
MIRT1969650	hsa-miR-3973	CLIP-seq
MIRT1969651	hsa-miR-423-5p	CLIP-seq
MIRT2508868	hsa-miR-4263	CLIP-seq
MIRT2508869	hsa-miR-4276	CLIP-seq
MIRT909771	hsa-miR-4282	CLIP-seq
MIRT2508870	hsa-miR-4291	CLIP-seq
MIRT2508871	hsa-miR-4292	CLIP-seq
MIRT2508872	hsa-miR-4302	CLIP-seq
MIRT2508873	hsa-miR-4307	CLIP-seq
MIRT2508874	hsa-miR-433	CLIP-seq
MIRT2508875	hsa-miR-4419b	CLIP-seq
MIRT2508877	hsa-miR-4452	CLIP-seq
MIRT2508878	hsa-miR-4453	CLIP-seq
MIRT2508880	hsa-miR-4478	CLIP-seq
MIRT2508881	hsa-miR-4517	CLIP-seq
MIRT2508882	hsa-miR-4538	CLIP-seq
MIRT2508883	hsa-miR-4649-3p	CLIP-seq
MIRT2508884	hsa-miR-4661-5p	CLIP-seq
MIRT2508885	hsa-miR-4696	CLIP-seq
MIRT2508886	hsa-miR-4703-5p	CLIP-seq
MIRT2508888	hsa-miR-4729	CLIP-seq
MIRT2508889	hsa-miR-4733-5p	CLIP-seq
MIRT2508890	hsa-miR-4744	CLIP-seq
MIRT1969652	hsa-miR-4764-3p	CLIP-seq
MIRT1969653	hsa-miR-4773	CLIP-seq
MIRT1969654	hsa-miR-4782-5p	CLIP-seq
MIRT2508891	hsa-miR-4793-3p	CLIP-seq
MIRT2508892	hsa-miR-4796-3p	CLIP-seq
MIRT2508893	hsa-miR-4797-5p	CLIP-seq
MIRT2508894	hsa-miR-4799-5p	CLIP-seq
MIRT2508895	hsa-miR-487a	CLIP-seq
MIRT2508896	hsa-miR-494	CLIP-seq
MIRT2508897	hsa-miR-519d	CLIP-seq
MIRT2508898	hsa-miR-520g	CLIP-seq
MIRT2508899	hsa-miR-520h	CLIP-seq
MIRT1969655	hsa-miR-539	CLIP-seq
MIRT2508901	hsa-miR-545	CLIP-seq
MIRT2508902	hsa-miR-548a-5p	CLIP-seq
MIRT2508903	hsa-miR-548ab	CLIP-seq
MIRT2508904	hsa-miR-548ac	CLIP-seq
MIRT2508905	hsa-miR-548ae	CLIP-seq
MIRT2508906	hsa-miR-548ah	CLIP-seq
MIRT2508907	hsa-miR-548aj	CLIP-seq
MIRT2508908	hsa-miR-548ak	CLIP-seq
MIRT2508909	hsa-miR-548am	CLIP-seq
MIRT2508910	hsa-miR-548b-3p	CLIP-seq
MIRT2508911	hsa-miR-548b-5p	CLIP-seq
MIRT2508912	hsa-miR-548c-3p	CLIP-seq
MIRT2508913	hsa-miR-548c-5p	CLIP-seq
MIRT2508914	hsa-miR-548d-3p	CLIP-seq
MIRT2508915	hsa-miR-548d-5p	CLIP-seq
MIRT2508916	hsa-miR-548h	CLIP-seq
MIRT2508917	hsa-miR-548i	CLIP-seq
MIRT2508918	hsa-miR-548j	CLIP-seq
MIRT1969656	hsa-miR-548l	CLIP-seq
MIRT2508919	hsa-miR-548w	CLIP-seq
MIRT2508920	hsa-miR-548x	CLIP-seq
MIRT2508921	hsa-miR-548y	CLIP-seq
MIRT2508922	hsa-miR-548z	CLIP-seq
MIRT2508923	hsa-miR-559	CLIP-seq
MIRT909775	hsa-miR-576-5p	CLIP-seq
MIRT2508924	hsa-miR-582-3p	CLIP-seq
MIRT2508925	hsa-miR-601	CLIP-seq
MIRT2508926	hsa-miR-604	CLIP-seq
MIRT2508927	hsa-miR-605	CLIP-seq
MIRT2508928	hsa-miR-612	CLIP-seq
MIRT1969657	hsa-miR-618	CLIP-seq
MIRT909776	hsa-miR-634	CLIP-seq
MIRT2508929	hsa-miR-635	CLIP-seq
MIRT2508930	hsa-miR-643	CLIP-seq
MIRT2508931	hsa-miR-647	CLIP-seq
MIRT2508933	hsa-miR-759	CLIP-seq
MIRT2508934	hsa-miR-875-5p	CLIP-seq
MIRT2508935	hsa-miR-921	CLIP-seq
MIRT2508936	hsa-miR-93	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	11937501, 20018661, 32814053
GO:0005681	Component	Spliceosomal complex	IEA
GO:0005737	Component	Cytoplasm	IEA
GO:0006397	Process	MRNA processing	IEA
GO:0008017	Function	Microtubule binding	IBA
GO:0008017	Function	Microtubule binding	IEA
GO:0008017	Function	Microtubule binding	ISS
GO:0008380	Process	RNA splicing	IEA
GO:0014069	Component	Postsynaptic density	ISS
GO:0030165	Function	PDZ domain binding	IDA	17474715
GO:0030165	Function	PDZ domain binding	IEA
GO:0030425	Component	Dendrite	IBA
GO:0030425	Component	Dendrite	IEA
GO:0030425	Component	Dendrite	ISS
GO:0031122	Process	Cytoplasmic microtubule organization	IBA
GO:0031122	Process	Cytoplasmic microtubule organization	IEA
GO:0031122	Process	Cytoplasmic microtubule organization	ISS
GO:0035372	Process	Protein localization to microtubule	IEA
GO:0035372	Process	Protein localization to microtubule	ISS
GO:0042995	Component	Cell projection	IEA
GO:0043025	Component	Neuronal cell body	IEA
GO:0043025	Component	Neuronal cell body	ISS
GO:0043197	Component	Dendritic spine	IEA
GO:0043197	Component	Dendritic spine	ISS
GO:0043198	Component	Dendritic shaft	IEA
GO:0043198	Component	Dendritic shaft	ISS
GO:0044877	Function	Protein-containing complex binding	IEA
GO:0044877	Function	Protein-containing complex binding	ISS
GO:0045202	Component	Synapse	IEA
GO:0097110	Function	Scaffold protein binding	IDA	17474715
GO:0098978	Component	Glutamatergic synapse	IEA
GO:0099092	Component	Postsynaptic density, intracellular component	IEA
GO:0099151	Process	Regulation of postsynaptic density assembly	IEA
GO:1902897	Process	Regulation of postsynaptic density protein 95 clustering	IEA
GO:1902897	Process	Regulation of postsynaptic density protein 95 clustering	ISS

Other IDs

• MIM: 604594
• HGNC: 14312
• e!Ensembl: ENSG00000119878

Protein

• UniProt ID: Q9P021
• Protein name: Cysteine-rich PDZ-binding protein (Cysteine-rich interactor of PDZ three) (Cysteine-rich interactor of PDZ3)
• Protein function: As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs (Probable). Involved in the cytoskeletal anchoring of DLG4 in excitatory synapses (By similarity). {ECO:0000250|UniProtKB:Q792Q4, ECO:0000305|PubM
• PDB: 7DVQ
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF10235	Cript	11 → 100	Microtubule-associated protein CRIPT	Family

• Sequence:

  MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI
  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV

• Sequence length: 101

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Causal
Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession	Evidence Score
Ateleiotic dwarfism	Pathogenic	rs587779356, rs587779348	RCV000115046 RCV000115047	★★★★☆ ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Rothmund-Thomson syndrome type 3	Pathogenic; Likely pathogenic	rs587779356, rs587779348, rs1558716043, rs757078301, rs2466595181, rs771238795	RCV000116206 RCV000116207 RCV002281649 RCV000240836 RCV004526293 RCV001254147	★★★★★ ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
CENTRAL NERVOUS SYSTEM CANCER	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
COLOR VISION DISORDER	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
CRIPT-related disorder	Uncertain significance; Benign	ClinVar	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
DESBUQUOIS SYNDROME	—	CTD	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
EBV-positive nodal T- and NK-cell lymphoma	Likely benign	ClinVar	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
GLIOBLASTOMA MULTIFORME	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
GLIOMA	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
HYPERTENSIVE NEPHROPATHY	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
METABOLIC SYNDROME	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PITUITARY DWARFISM I	—	Disgenet	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
ROTHMUND-THOMSON SYNDROME	—	Disgenet	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
ROTHMUND-THOMSON SYNDROME, TYPE 3	—	ClinVar, Disgenet, HPO ClinVar, Disgenet, HPO ClinVar, Disgenet, HPO	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
TYPE 2 DIABETES MELLITUS	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Anemia	Anemia	HPO_DG			★☆☆☆☆ Found in Text Mining only
Brachydactyly	Brachydactyly	HPO_DG			★☆☆☆☆ Found in Text Mining only
Complex partial seizure with impairment of consciousness	Dyscognitive seizures	HPO_DG			★☆☆☆☆ Found in Text Mining only
Complex partial seizures	Seizure	HPO_DG			★☆☆☆☆ Found in Text Mining only
Congenital clubfoot	Congenital Clubfoot	HPO_DG			★☆☆☆☆ Found in Text Mining only
Dwarfism	Dwarfism	BEFREE	27250922		★☆☆☆☆ Found in Text Mining only
Dwarfism	Dwarfism	HPO_DG			★☆☆☆☆ Found in Text Mining only
Dwarfism	Dwarfism	CLINVAR_DG			★☆☆☆☆ Found in Text Mining only
Epilepsy	Epilepsy	Pubtator	37013901	Associate	★☆☆☆☆ Found in Text Mining only
Exophthalmos	Proptosis	HPO_DG			★☆☆☆☆ Found in Text Mining only
Exotropia	Exotropia	HPO_DG			★☆☆☆☆ Found in Text Mining only
Frontal bossing	Frontal bossing	HPO_DG			★☆☆☆☆ Found in Text Mining only
Hypersensitivity Delayed	Hypersensitivity	Pubtator	37013901	Associate	★☆☆☆☆ Found in Text Mining only
Microcephaly	Microcephaly	HPO_DG			★☆☆☆☆ Found in Text Mining only
Nystagmus	Nystagmus	HPO_DG			★☆☆☆☆ Found in Text Mining only
Osteopenia	Osteopenia	HPO_DG			★☆☆☆☆ Found in Text Mining only
Pituitary dwarfism 1	Pituitary dwarfism	Pubtator	24389050	Associate	★☆☆☆☆ Found in Text Mining only
PITUITARY DWARFISM I	Pituitary dwarfism	BEFREE	27250922		★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PITUITARY DWARFISM I	Pituitary dwarfism	CLINVAR_DG			★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Profound global developmental delay	Developmental Delay	HPO_DG			★☆☆☆☆ Found in Text Mining only
Seizures	Seizures	Pubtator	37013901	Associate	★☆☆☆☆ Found in Text Mining only
Severe myopia	Myopia	HPO_DG			★☆☆☆☆ Found in Text Mining only
SHORT STATURE WITH MICROCEPHALY AND DISTINCTIVE FACIES	Short Stature With Microcephaly And Distinctive Facies	GENOMICS_ENGLAND_DG	24389050		★☆☆☆☆ Found in Text Mining only
SHORT STATURE WITH MICROCEPHALY AND DISTINCTIVE FACIES	Short Stature With Microcephaly And Distinctive Facies	UNIPROT_DG	24389050, 27250922		★☆☆☆☆ Found in Text Mining only
SHORT STATURE WITH MICROCEPHALY AND DISTINCTIVE FACIES	Short Stature With Microcephaly And Distinctive Facies	CLINVAR_DG	27250922		★☆☆☆☆ Found in Text Mining only
Syndactyly	Syndactyly	HPO_DG			★☆☆☆☆ Found in Text Mining only