Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID	9253
Gene name	NUMB like endocytic adaptor protein
Gene symbol	NUMBL
Synonyms (NCBI Gene)	CAG3ACTG3aNBLNUMB-RNUMBLIKENUMBRTNRC23
Chromosome	19
Chromosome location	19q13.2

184

Show/Hide all (184)

miRTarBase ID	miRNA	Experiments	Reference
MIRT003111	hsa-miR-122-5p	Luciferase reporter assayqRT-PCR	19296470
MIRT003111	hsa-miR-122-5p	Luciferase reporter assayqRT-PCR	19296470
MIRT655687	hsa-miR-4269	HITS-CLIP	23824327
MIRT655686	hsa-miR-6715b-5p	HITS-CLIP	23824327
MIRT655685	hsa-miR-4645-5p	HITS-CLIP	23824327
MIRT655684	hsa-miR-4673	HITS-CLIP	23824327
MIRT655683	hsa-miR-3127-3p	HITS-CLIP	23824327
MIRT655682	hsa-miR-6756-3p	HITS-CLIP	23824327
MIRT655681	hsa-miR-4258	HITS-CLIP	23824327
MIRT655680	hsa-miR-5088-3p	HITS-CLIP	23824327
MIRT655679	hsa-miR-6734-3p	HITS-CLIP	23824327
MIRT655678	hsa-miR-4778-3p	HITS-CLIP	23824327
MIRT655677	hsa-miR-4755-3p	HITS-CLIP	23824327
MIRT655676	hsa-miR-6826-3p	HITS-CLIP	23824327
MIRT655674	hsa-miR-6875-3p	HITS-CLIP	23824327
MIRT655687	hsa-miR-4269	HITS-CLIP	23824327
MIRT655686	hsa-miR-6715b-5p	HITS-CLIP	23824327
MIRT655685	hsa-miR-4645-5p	HITS-CLIP	23824327
MIRT655684	hsa-miR-4673	HITS-CLIP	23824327
MIRT655683	hsa-miR-3127-3p	HITS-CLIP	23824327
MIRT655682	hsa-miR-6756-3p	HITS-CLIP	23824327
MIRT655681	hsa-miR-4258	HITS-CLIP	23824327
MIRT655680	hsa-miR-5088-3p	HITS-CLIP	23824327
MIRT655679	hsa-miR-6734-3p	HITS-CLIP	23824327
MIRT655678	hsa-miR-4778-3p	HITS-CLIP	23824327
MIRT655677	hsa-miR-4755-3p	HITS-CLIP	23824327
MIRT655676	hsa-miR-6826-3p	HITS-CLIP	23824327
MIRT655674	hsa-miR-6875-3p	HITS-CLIP	23824327
MIRT1198945	hsa-miR-122	CLIP-seq
MIRT1198946	hsa-miR-1225-3p	CLIP-seq
MIRT1198947	hsa-miR-1245	CLIP-seq
MIRT1198948	hsa-miR-141	CLIP-seq
MIRT1198949	hsa-miR-200a	CLIP-seq
MIRT1198950	hsa-miR-3134	CLIP-seq
MIRT1198951	hsa-miR-3153	CLIP-seq
MIRT1198952	hsa-miR-3202	CLIP-seq
MIRT1198953	hsa-miR-3657	CLIP-seq
MIRT1198954	hsa-miR-3689d	CLIP-seq
MIRT1198955	hsa-miR-421	CLIP-seq
MIRT1198956	hsa-miR-4252	CLIP-seq
MIRT1198957	hsa-miR-4276	CLIP-seq
MIRT1198958	hsa-miR-4421	CLIP-seq
MIRT1198959	hsa-miR-4438	CLIP-seq
MIRT1198960	hsa-miR-4443	CLIP-seq
MIRT1198961	hsa-miR-4447	CLIP-seq
MIRT1198962	hsa-miR-4472	CLIP-seq
MIRT1198963	hsa-miR-4533	CLIP-seq
MIRT1198964	hsa-miR-4534	CLIP-seq
MIRT1198965	hsa-miR-4646-5p	CLIP-seq
MIRT1198966	hsa-miR-4668-5p	CLIP-seq
MIRT1198967	hsa-miR-4694-3p	CLIP-seq
MIRT1198968	hsa-miR-4709-5p	CLIP-seq
MIRT1198969	hsa-miR-4738-3p	CLIP-seq
MIRT1198970	hsa-miR-4761-3p	CLIP-seq
MIRT1198971	hsa-miR-4763-5p	CLIP-seq
MIRT1198972	hsa-miR-4768-3p	CLIP-seq
MIRT1198973	hsa-miR-4793-5p	CLIP-seq
MIRT1198974	hsa-miR-4802-5p	CLIP-seq
MIRT1198975	hsa-miR-505	CLIP-seq
MIRT1198976	hsa-miR-5095	CLIP-seq
MIRT1198977	hsa-miR-574-5p	CLIP-seq
MIRT2057652	hsa-miR-203	CLIP-seq
MIRT2057653	hsa-miR-3151	CLIP-seq
MIRT2057654	hsa-miR-3170	CLIP-seq
MIRT2057655	hsa-miR-342-5p	CLIP-seq
MIRT2057656	hsa-miR-34a	CLIP-seq
MIRT2057657	hsa-miR-34c-5p	CLIP-seq
MIRT2057658	hsa-miR-3650	CLIP-seq
MIRT2057659	hsa-miR-4260	CLIP-seq
MIRT2057660	hsa-miR-4433	CLIP-seq
MIRT1198959	hsa-miR-4438	CLIP-seq
MIRT1198961	hsa-miR-4447	CLIP-seq
MIRT1198962	hsa-miR-4472	CLIP-seq
MIRT2057661	hsa-miR-449a	CLIP-seq
MIRT2057662	hsa-miR-449b	CLIP-seq
MIRT2057663	hsa-miR-4651	CLIP-seq
MIRT2057664	hsa-miR-4664-5p	CLIP-seq
MIRT2057665	hsa-miR-4715-3p	CLIP-seq
MIRT2057666	hsa-miR-4722-3p	CLIP-seq
MIRT2057667	hsa-miR-4735-5p	CLIP-seq
MIRT1198971	hsa-miR-4763-5p	CLIP-seq
MIRT2057668	hsa-miR-4775	CLIP-seq
MIRT2057669	hsa-miR-491-5p	CLIP-seq
MIRT1198976	hsa-miR-5095	CLIP-seq
MIRT2057670	hsa-miR-522	CLIP-seq
MIRT2057671	hsa-miR-541	CLIP-seq
MIRT2057672	hsa-miR-566	CLIP-seq
MIRT2057673	hsa-miR-590-3p	CLIP-seq
MIRT2057674	hsa-miR-608	CLIP-seq
MIRT2057675	hsa-miR-609	CLIP-seq
MIRT2057676	hsa-miR-654-5p	CLIP-seq
MIRT2286009	hsa-miR-1202	CLIP-seq
MIRT1198946	hsa-miR-1225-3p	CLIP-seq
MIRT2286010	hsa-miR-1231	CLIP-seq
MIRT2286011	hsa-miR-1254	CLIP-seq
MIRT2286012	hsa-miR-1256	CLIP-seq
MIRT2286013	hsa-miR-1911	CLIP-seq
MIRT2286014	hsa-miR-2110	CLIP-seq
MIRT2286015	hsa-miR-3116	CLIP-seq
MIRT2286016	hsa-miR-3120-3p	CLIP-seq
MIRT2286017	hsa-miR-3150a-3p	CLIP-seq
MIRT2057653	hsa-miR-3151	CLIP-seq
MIRT2057654	hsa-miR-3170	CLIP-seq
MIRT2286018	hsa-miR-3179	CLIP-seq
MIRT2286019	hsa-miR-3194-5p	CLIP-seq
MIRT1198952	hsa-miR-3202	CLIP-seq
MIRT2286020	hsa-miR-329	CLIP-seq
MIRT2057655	hsa-miR-342-5p	CLIP-seq
MIRT2057656	hsa-miR-34a	CLIP-seq
MIRT2057657	hsa-miR-34c-5p	CLIP-seq
MIRT2286021	hsa-miR-362-3p	CLIP-seq
MIRT2057658	hsa-miR-3650	CLIP-seq
MIRT2286022	hsa-miR-3664-3p	CLIP-seq
MIRT2286023	hsa-miR-3972	CLIP-seq
MIRT2057659	hsa-miR-4260	CLIP-seq
MIRT2286024	hsa-miR-4271	CLIP-seq
MIRT2286025	hsa-miR-4310	CLIP-seq
MIRT2286026	hsa-miR-4317	CLIP-seq
MIRT2057660	hsa-miR-4433	CLIP-seq
MIRT1198959	hsa-miR-4438	CLIP-seq
MIRT1198961	hsa-miR-4447	CLIP-seq
MIRT2286027	hsa-miR-4459	CLIP-seq
MIRT1198962	hsa-miR-4472	CLIP-seq
MIRT2057661	hsa-miR-449a	CLIP-seq
MIRT2057662	hsa-miR-449b	CLIP-seq
MIRT2057663	hsa-miR-4651	CLIP-seq
MIRT2057664	hsa-miR-4664-5p	CLIP-seq
MIRT2286028	hsa-miR-4667-5p	CLIP-seq
MIRT2286029	hsa-miR-4700-5p	CLIP-seq
MIRT2286030	hsa-miR-4711-3p	CLIP-seq
MIRT2057665	hsa-miR-4715-3p	CLIP-seq
MIRT2057666	hsa-miR-4722-3p	CLIP-seq
MIRT2286031	hsa-miR-4725-3p	CLIP-seq
MIRT2057667	hsa-miR-4735-5p	CLIP-seq
MIRT2286032	hsa-miR-4747-5p	CLIP-seq
MIRT1198971	hsa-miR-4763-5p	CLIP-seq
MIRT1198972	hsa-miR-4768-3p	CLIP-seq
MIRT2057669	hsa-miR-491-5p	CLIP-seq
MIRT2286033	hsa-miR-498	CLIP-seq
MIRT1198976	hsa-miR-5095	CLIP-seq
MIRT2286034	hsa-miR-510	CLIP-seq
MIRT2057671	hsa-miR-541	CLIP-seq
MIRT2286035	hsa-miR-550a	CLIP-seq
MIRT2057672	hsa-miR-566	CLIP-seq
MIRT2057674	hsa-miR-608	CLIP-seq
MIRT2286036	hsa-miR-637	CLIP-seq
MIRT2057676	hsa-miR-654-5p	CLIP-seq
MIRT2286037	hsa-miR-661	CLIP-seq
MIRT2286038	hsa-miR-665	CLIP-seq
MIRT1198952	hsa-miR-3202	CLIP-seq
MIRT2431735	hsa-miR-1273g	CLIP-seq
MIRT2431736	hsa-miR-1293	CLIP-seq
MIRT2431737	hsa-miR-1321	CLIP-seq
MIRT2431738	hsa-miR-140-5p	CLIP-seq
MIRT2431739	hsa-miR-142-3p	CLIP-seq
MIRT2431740	hsa-miR-3126-5p	CLIP-seq
MIRT2431741	hsa-miR-3137	CLIP-seq
MIRT2431742	hsa-miR-323b-5p	CLIP-seq
MIRT2431743	hsa-miR-3545-5p	CLIP-seq
MIRT2431744	hsa-miR-3686	CLIP-seq
MIRT2431745	hsa-miR-409-3p	CLIP-seq
MIRT2431746	hsa-miR-4419a	CLIP-seq
MIRT2431747	hsa-miR-4460	CLIP-seq
MIRT2431748	hsa-miR-4483	CLIP-seq
MIRT2431749	hsa-miR-4510	CLIP-seq
MIRT2057663	hsa-miR-4651	CLIP-seq
MIRT2431750	hsa-miR-4728-5p	CLIP-seq
MIRT2431751	hsa-miR-4739	CLIP-seq
MIRT2431752	hsa-miR-4756-5p	CLIP-seq
MIRT2431753	hsa-miR-4781-3p	CLIP-seq
MIRT2431754	hsa-miR-563	CLIP-seq
MIRT2057674	hsa-miR-608	CLIP-seq
MIRT2057675	hsa-miR-609	CLIP-seq
MIRT2431755	hsa-miR-659	CLIP-seq
MIRT2431756	hsa-miR-876-3p	CLIP-seq
MIRT2455548	hsa-miR-1267	CLIP-seq
MIRT2455549	hsa-miR-4423-5p	CLIP-seq
MIRT2455550	hsa-miR-4514	CLIP-seq
MIRT2455551	hsa-miR-4652-3p	CLIP-seq
MIRT2455552	hsa-miR-4692	CLIP-seq
MIRT2455553	hsa-miR-4722-5p	CLIP-seq
MIRT2455554	hsa-miR-4778-5p	CLIP-seq
MIRT2455555	hsa-miR-4797-5p	CLIP-seq
MIRT2455556	hsa-miR-940	CLIP-seq

Show/Hide all (22)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	16273093, 16713569, 20079715, 32296183, 32814053, 35384245
GO:0005737	Component	Cytoplasm	IBA
GO:0005737	Component	Cytoplasm	IEA
GO:0007399	Process	Nervous system development	IEA
GO:0007399	Process	Nervous system development	IEA
GO:0007399	Process	Nervous system development	TAS	9303539
GO:0007405	Process	Neuroblast proliferation	IEA
GO:0007409	Process	Axonogenesis	IEA
GO:0019221	Process	Cytokine-mediated signaling pathway	IDA	18299187
GO:0019538	Process	Protein metabolic process	IDA	20079715
GO:0021670	Process	Lateral ventricle development	IEA
GO:0021670	Process	Lateral ventricle development	ISS
GO:0021849	Process	Neuroblast division in subventricular zone	IEA
GO:0021849	Process	Neuroblast division in subventricular zone	ISS
GO:0030900	Process	Forebrain development	IEA
GO:0034332	Process	Adherens junction organization	IEA
GO:0050769	Process	Positive regulation of neurogenesis	IBA
GO:0050769	Process	Positive regulation of neurogenesis	IEA
GO:0050769	Process	Positive regulation of neurogenesis	ISS
GO:0050775	Process	Positive regulation of dendrite morphogenesis	IEA
GO:0098978	Component	Glutamatergic synapse	IEA
GO:0150052	Process	Regulation of postsynapse assembly	IEA

MIM	HGNC	e!Ensembl
604018	8061	ENSG00000105245

Q9Y6R0

Protein name

Numb-like protein (Numb-related protein) (Numb-R)

Protein function

Plays a role in the process of neurogenesis. Required throughout embryonic neurogenesis to maintain neural progenitor cells, also called radial glial cells (RGCs), by allowing their daughter cells to choose progenitor over neuronal cell fate. No

PDB

3F0W

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00640	PID	80 → 202	Phosphotyrosine interaction domain (PTB/PID)	Domain
PF06311	NumbF	287 → 371	NUMB domain	Family

Sequence

MSRSAAASGGPRRPERHLPPAPCGAPGPPETCRTEPDGAGTMNKLRQSLRRRKPAYVPEA
SRPHQWQADEDAVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWV
SADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDS
GERLSHAVGCAFAACLERKQRREKECGVTAAFDASRTSFAREGSFRLSGGGRPAEREAPD
KKKAEAAAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPRRHAPLEQL
VRQGSFRGFPALSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGTVPEMEPPGAGDSDSI
NALCTQISSSFASAGAPAPGPPPATTGTSAWGEPSVPPAAAFQPGHKRTPSEAERWLEEV
SQVAKAQQQQQQQQQQQQQQQQQQQQAASVAPVPTMPPALQPFPAPVGPFDAAPAQVAVF
LPPPHMQPPFVPAYPGLGYPPMPRVPVVGITPSQMVANAFCSAAQLQPQPATLLGKAGAF
PPPAIPSAPGSQARPRPNGAPWPPEPAPAPAPELDPFEAQWAALEGKATVEKPSNPFSGD
LQKTFEIEL

Sequence length

609

Interactions

View interactions

	KEGG
	Notch signaling pathway

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (7)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
ANGIOEDEMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
GESTATIONAL DIABETES	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
LUNG ADENOCARCINOMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
LUNG CANCER	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
LUNG CARCINOMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
SCHIZOPHRENIA	—	Disgenet	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
SQUAMOUS CELL CARCINOMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (21)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Carcinogenesis	Carcinogenesis	Pubtator	23681800	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma of lung	Lung carcinoma	GWASCAT_DG	28604730		★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma Renal Cell	Renal cell carcinoma	Pubtator	31888545	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Colorectal Neoplasms	Colorectal neoplasm	Pubtator	38167072	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Diabetes Mellitus	Diabetes mellitus	Pubtator	36834720	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Endometrial Neoplasms	Endometrial neoplasm	Pubtator	37657045	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Glioblastoma	Glioblastoma	Pubtator	22593207	Inhibit	★★★★★ ★☆☆☆☆ Found in Text Mining only
Glioma	Glioma	LHGDN	18940473		★★★★★ ★☆☆☆☆ Found in Text Mining only
Glioma	Glioma	Pubtator	22593207	Inhibit	★★★★★ ★☆☆☆☆ Found in Text Mining only
Localized neuroblastoma	Neuroblastoma	BEFREE	15329919, 9060561		★★★★★ ★☆☆☆☆ Found in Text Mining only
Lung Neoplasms	Lung neoplasms	Pubtator	23681800	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant Neoplasms	Malignant Neoplasm	BEFREE	19437537		★★★★★ ★☆☆☆☆ Found in Text Mining only
Multiple Myeloma	Multiple myeloma	Pubtator	31888545	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Neoplasms	Neoplasms	BEFREE	24356251, 29507685		★★★★★ ★☆☆☆☆ Found in Text Mining only
Neuroblastoma	Neuroblastoma	BEFREE	10348353, 15231663, 22052359, 2284101, 30532223, 9307181, 9516824		★★★★★ ★☆☆☆☆ Found in Text Mining only
Noncompaction cardiomyopathy	Noncompaction cardiomyopathy	BEFREE	28067668		★★★★★ ★☆☆☆☆ Found in Text Mining only
Prostate carcinoma	Prostate cancer	GWASCAT_DG	27515689		★★★★★ ★☆☆☆☆ Found in Text Mining only
Schizophrenia	Schizophrenia	BEFREE	16899352		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Schizophrenia	Schizophrenia	PSYGENET_DG	16899352		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Squamous Cell Carcinoma of Head and Neck	Squamous cell carcinoma	Pubtator	37373553	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Thyroid Cancer Papillary	Papillary thyroid cancer	Pubtator	35599603	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only

NUMBL (NUMB like endocytic adaptor protein)