ZBED1 (zinc finger BED-type containing 1)

Gene

• Entrez ID: 9189
• Gene name: Zinc finger BED-type containing 1
• Gene symbol: ZBED1
• Synonyms (NCBI Gene): ALTE, DREF, TRAMP, hDREF
• Chromosome: X|Y
• Chromosome location: X;Y
• Summary: This gene is located in the pseudoautosomal region 1 (PAR1) of X and Y chromosomes. It was earlier identified as a gene with similarity to Ac transposable elements, however, was found not to have transposase activity. Later studies show that this gene pro

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT019734	hsa-miR-375	Microarray	20215506
MIRT029074	hsa-miR-26b-5p	Microarray	19088304
MIRT030435	hsa-miR-24-3p	Microarray	19748357
MIRT043249	hsa-miR-324-5p	CLASH	23622248
MIRT038468	hsa-miR-296-3p	CLASH	23622248
MIRT709560	hsa-miR-106a-5p	HITS-CLIP	19536157
MIRT709559	hsa-miR-106b-5p	HITS-CLIP	19536157
MIRT709558	hsa-miR-17-5p	HITS-CLIP	19536157
MIRT709557	hsa-miR-20a-5p	HITS-CLIP	19536157
MIRT709556	hsa-miR-20b-5p	HITS-CLIP	19536157
MIRT709555	hsa-miR-519d-3p	HITS-CLIP	19536157
MIRT709554	hsa-miR-526b-3p	HITS-CLIP	19536157
MIRT709553	hsa-miR-93-5p	HITS-CLIP	19536157
MIRT709552	hsa-miR-302a-3p	HITS-CLIP	19536157
MIRT709551	hsa-miR-302b-3p	HITS-CLIP	19536157
MIRT709550	hsa-miR-302c-3p	HITS-CLIP	19536157
MIRT709549	hsa-miR-302d-3p	HITS-CLIP	19536157
MIRT709548	hsa-miR-302e	HITS-CLIP	19536157
MIRT709547	hsa-miR-372-3p	HITS-CLIP	19536157
MIRT709546	hsa-miR-373-3p	HITS-CLIP	19536157
MIRT709545	hsa-miR-520a-3p	HITS-CLIP	19536157
MIRT709544	hsa-miR-520b	HITS-CLIP	19536157
MIRT709543	hsa-miR-520c-3p	HITS-CLIP	19536157
MIRT709542	hsa-miR-520d-3p	HITS-CLIP	19536157
MIRT709541	hsa-miR-520e	HITS-CLIP	19536157
MIRT709540	hsa-miR-512-3p	HITS-CLIP	19536157
MIRT709539	hsa-miR-520g-3p	HITS-CLIP	19536157
MIRT709538	hsa-miR-520h	HITS-CLIP	19536157
MIRT709537	hsa-miR-186-3p	HITS-CLIP	19536157
MIRT709536	hsa-miR-1224-3p	HITS-CLIP	19536157
MIRT709535	hsa-miR-1234-3p	HITS-CLIP	19536157
MIRT709534	hsa-miR-7107-5p	HITS-CLIP	19536157
MIRT709533	hsa-miR-150-5p	HITS-CLIP	19536157
MIRT709532	hsa-miR-6778-3p	HITS-CLIP	19536157
MIRT644900	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT644899	hsa-miR-4762-5p	HITS-CLIP	23824327
MIRT644898	hsa-miR-6892-3p	HITS-CLIP	23824327
MIRT644897	hsa-miR-371b-5p	HITS-CLIP	23824327
MIRT644896	hsa-miR-373-5p	HITS-CLIP	23824327
MIRT644895	hsa-miR-616-5p	HITS-CLIP	23824327
MIRT644894	hsa-miR-371a-5p	HITS-CLIP	23824327
MIRT644893	hsa-miR-372-5p	HITS-CLIP	23824327
MIRT644892	hsa-miR-1304-3p	HITS-CLIP	23824327
MIRT644891	hsa-miR-3124-3p	HITS-CLIP	23824327
MIRT644890	hsa-miR-513c-5p	HITS-CLIP	23824327
MIRT644889	hsa-miR-514b-5p	HITS-CLIP	23824327
MIRT709560	hsa-miR-106a-5p	HITS-CLIP	19536157
MIRT709559	hsa-miR-106b-5p	HITS-CLIP	19536157
MIRT709558	hsa-miR-17-5p	HITS-CLIP	19536157
MIRT709557	hsa-miR-20a-5p	HITS-CLIP	19536157
MIRT709556	hsa-miR-20b-5p	HITS-CLIP	19536157
MIRT709555	hsa-miR-519d-3p	HITS-CLIP	19536157
MIRT709554	hsa-miR-526b-3p	HITS-CLIP	19536157
MIRT709553	hsa-miR-93-5p	HITS-CLIP	19536157
MIRT709552	hsa-miR-302a-3p	HITS-CLIP	19536157
MIRT709551	hsa-miR-302b-3p	HITS-CLIP	19536157
MIRT709550	hsa-miR-302c-3p	HITS-CLIP	19536157
MIRT709549	hsa-miR-302d-3p	HITS-CLIP	19536157
MIRT709548	hsa-miR-302e	HITS-CLIP	19536157
MIRT709547	hsa-miR-372-3p	HITS-CLIP	19536157
MIRT709546	hsa-miR-373-3p	HITS-CLIP	19536157
MIRT709545	hsa-miR-520a-3p	HITS-CLIP	19536157
MIRT709544	hsa-miR-520b	HITS-CLIP	19536157
MIRT709543	hsa-miR-520c-3p	HITS-CLIP	19536157
MIRT709542	hsa-miR-520d-3p	HITS-CLIP	19536157
MIRT709541	hsa-miR-520e	HITS-CLIP	19536157
MIRT709540	hsa-miR-512-3p	HITS-CLIP	19536157
MIRT709539	hsa-miR-520g-3p	HITS-CLIP	19536157
MIRT709538	hsa-miR-520h	HITS-CLIP	19536157
MIRT709537	hsa-miR-186-3p	HITS-CLIP	19536157
MIRT709536	hsa-miR-1224-3p	HITS-CLIP	19536157
MIRT709535	hsa-miR-1234-3p	HITS-CLIP	19536157
MIRT709534	hsa-miR-7107-5p	HITS-CLIP	19536157
MIRT709533	hsa-miR-150-5p	HITS-CLIP	19536157
MIRT709532	hsa-miR-6778-3p	HITS-CLIP	19536157
MIRT644900	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT644899	hsa-miR-4762-5p	HITS-CLIP	23824327
MIRT644898	hsa-miR-6892-3p	HITS-CLIP	23824327
MIRT644897	hsa-miR-371b-5p	HITS-CLIP	23824327
MIRT644896	hsa-miR-373-5p	HITS-CLIP	23824327
MIRT644895	hsa-miR-616-5p	HITS-CLIP	23824327
MIRT644894	hsa-miR-371a-5p	HITS-CLIP	23824327
MIRT644893	hsa-miR-372-5p	HITS-CLIP	23824327
MIRT644892	hsa-miR-1304-3p	HITS-CLIP	23824327
MIRT644891	hsa-miR-3124-3p	HITS-CLIP	23824327
MIRT644890	hsa-miR-513c-5p	HITS-CLIP	23824327
MIRT644889	hsa-miR-514b-5p	HITS-CLIP	23824327
MIRT1501640	hsa-miR-1587	CLIP-seq
MIRT1501641	hsa-miR-3120-3p	CLIP-seq
MIRT1501642	hsa-miR-330-3p	CLIP-seq
MIRT1501643	hsa-miR-4422	CLIP-seq
MIRT1501644	hsa-miR-4492	CLIP-seq
MIRT1501645	hsa-miR-4498	CLIP-seq
MIRT1501646	hsa-miR-4656	CLIP-seq
MIRT1501647	hsa-miR-4675	CLIP-seq
MIRT1501648	hsa-miR-4699-3p	CLIP-seq
MIRT1501649	hsa-miR-4741	CLIP-seq
MIRT1501650	hsa-miR-545	CLIP-seq
MIRT1501651	hsa-miR-555	CLIP-seq
MIRT1501652	hsa-miR-762	CLIP-seq
MIRT1501653	hsa-miR-1207-3p	CLIP-seq
MIRT1501654	hsa-miR-122	CLIP-seq
MIRT1501655	hsa-miR-1236	CLIP-seq
MIRT1501656	hsa-miR-1253	CLIP-seq
MIRT1501657	hsa-miR-125a-5p	CLIP-seq
MIRT1501658	hsa-miR-125b	CLIP-seq
MIRT1501659	hsa-miR-1301	CLIP-seq
MIRT1501660	hsa-miR-132	CLIP-seq
MIRT1501661	hsa-miR-1343	CLIP-seq
MIRT1501662	hsa-miR-135a	CLIP-seq
MIRT1501663	hsa-miR-135b	CLIP-seq
MIRT1501664	hsa-miR-139-3p	CLIP-seq
MIRT1501665	hsa-miR-146a	CLIP-seq
MIRT1501666	hsa-miR-146b-5p	CLIP-seq
MIRT1501667	hsa-miR-1470	CLIP-seq
MIRT1501668	hsa-miR-1913	CLIP-seq
MIRT1501669	hsa-miR-1915	CLIP-seq
MIRT1501670	hsa-miR-1976	CLIP-seq
MIRT1501671	hsa-miR-2052	CLIP-seq
MIRT1501672	hsa-miR-2053	CLIP-seq
MIRT1501673	hsa-miR-212	CLIP-seq
MIRT1501674	hsa-miR-214	CLIP-seq
MIRT1501675	hsa-miR-24	CLIP-seq
MIRT1501676	hsa-miR-28-5p	CLIP-seq
MIRT1501677	hsa-miR-299-5p	CLIP-seq
MIRT1501641	hsa-miR-3120-3p	CLIP-seq
MIRT1501678	hsa-miR-3128	CLIP-seq
MIRT1501679	hsa-miR-3135b	CLIP-seq
MIRT1501680	hsa-miR-3139	CLIP-seq
MIRT1501681	hsa-miR-3140-3p	CLIP-seq
MIRT1501682	hsa-miR-3149	CLIP-seq
MIRT1501683	hsa-miR-3150b-3p	CLIP-seq
MIRT1501684	hsa-miR-3155	CLIP-seq
MIRT1501685	hsa-miR-3155b	CLIP-seq
MIRT1501686	hsa-miR-3187-3p	CLIP-seq
MIRT1501687	hsa-miR-3194-3p	CLIP-seq
MIRT1501688	hsa-miR-324-3p	CLIP-seq
MIRT1501689	hsa-miR-326	CLIP-seq
MIRT1501642	hsa-miR-330-3p	CLIP-seq
MIRT1501690	hsa-miR-330-5p	CLIP-seq
MIRT1501691	hsa-miR-346	CLIP-seq
MIRT1501692	hsa-miR-3619-5p	CLIP-seq
MIRT1501693	hsa-miR-3646	CLIP-seq
MIRT1501694	hsa-miR-3652	CLIP-seq
MIRT1501695	hsa-miR-3655	CLIP-seq
MIRT1501696	hsa-miR-3662	CLIP-seq
MIRT1501697	hsa-miR-3663-5p	CLIP-seq
MIRT1501698	hsa-miR-3672	CLIP-seq
MIRT1501699	hsa-miR-378g	CLIP-seq
MIRT1501700	hsa-miR-3944-5p	CLIP-seq
MIRT1501701	hsa-miR-411	CLIP-seq
MIRT1501702	hsa-miR-4251	CLIP-seq
MIRT1501703	hsa-miR-4270	CLIP-seq
MIRT1501704	hsa-miR-4284	CLIP-seq
MIRT1501705	hsa-miR-4288	CLIP-seq
MIRT1501706	hsa-miR-4294	CLIP-seq
MIRT1501707	hsa-miR-4319	CLIP-seq
MIRT1501708	hsa-miR-4324	CLIP-seq
MIRT1501709	hsa-miR-4327	CLIP-seq
MIRT1501643	hsa-miR-4422	CLIP-seq
MIRT1501710	hsa-miR-4430	CLIP-seq
MIRT1501711	hsa-miR-4435	CLIP-seq
MIRT1501712	hsa-miR-4437	CLIP-seq
MIRT1501713	hsa-miR-4441	CLIP-seq
MIRT1501714	hsa-miR-4514	CLIP-seq
MIRT1501715	hsa-miR-455-3p	CLIP-seq
MIRT1501716	hsa-miR-4633-3p	CLIP-seq
MIRT1501717	hsa-miR-4674	CLIP-seq
MIRT1501718	hsa-miR-4689	CLIP-seq
MIRT1501719	hsa-miR-4690-5p	CLIP-seq
MIRT1501720	hsa-miR-4691-3p	CLIP-seq
MIRT1501721	hsa-miR-4692	CLIP-seq
MIRT1501648	hsa-miR-4699-3p	CLIP-seq
MIRT1501722	hsa-miR-4701-5p	CLIP-seq
MIRT1501723	hsa-miR-4709-5p	CLIP-seq
MIRT1501724	hsa-miR-4716-5p	CLIP-seq
MIRT1501725	hsa-miR-4720-5p	CLIP-seq
MIRT1501726	hsa-miR-4726-3p	CLIP-seq
MIRT1501727	hsa-miR-4735-5p	CLIP-seq
MIRT1501728	hsa-miR-4755-3p	CLIP-seq
MIRT1501729	hsa-miR-4772-3p	CLIP-seq
MIRT1501730	hsa-miR-4775	CLIP-seq
MIRT1501731	hsa-miR-4781-3p	CLIP-seq
MIRT1501732	hsa-miR-4784	CLIP-seq
MIRT1501733	hsa-miR-4799-3p	CLIP-seq
MIRT1501734	hsa-miR-483-5p	CLIP-seq
MIRT1501735	hsa-miR-484	CLIP-seq
MIRT1501736	hsa-miR-5047	CLIP-seq
MIRT1501737	hsa-miR-513a-3p	CLIP-seq
MIRT1501650	hsa-miR-545	CLIP-seq
MIRT1501738	hsa-miR-548c-3p	CLIP-seq
MIRT1501739	hsa-miR-548s	CLIP-seq
MIRT1501651	hsa-miR-555	CLIP-seq
MIRT1501740	hsa-miR-588	CLIP-seq
MIRT1501741	hsa-miR-590-3p	CLIP-seq
MIRT1501742	hsa-miR-595	CLIP-seq
MIRT1501743	hsa-miR-610	CLIP-seq
MIRT1501744	hsa-miR-632	CLIP-seq
MIRT1501745	hsa-miR-649	CLIP-seq
MIRT1501746	hsa-miR-708	CLIP-seq
MIRT1501747	hsa-miR-761	CLIP-seq
MIRT1501748	hsa-miR-885-3p	CLIP-seq
MIRT1501727	hsa-miR-4735-5p	CLIP-seq
MIRT1501730	hsa-miR-4775	CLIP-seq
MIRT1501741	hsa-miR-590-3p	CLIP-seq
MIRT1501654	hsa-miR-122	CLIP-seq
MIRT2150811	hsa-miR-221	CLIP-seq
MIRT2150812	hsa-miR-222	CLIP-seq
MIRT1501675	hsa-miR-24	CLIP-seq
MIRT1501678	hsa-miR-3128	CLIP-seq
MIRT1501679	hsa-miR-3135b	CLIP-seq
MIRT1501694	hsa-miR-3652	CLIP-seq
MIRT1501697	hsa-miR-3663-5p	CLIP-seq
MIRT1501704	hsa-miR-4284	CLIP-seq
MIRT1501710	hsa-miR-4430	CLIP-seq
MIRT2150813	hsa-miR-4645-5p	CLIP-seq
MIRT2150814	hsa-miR-4673	CLIP-seq
MIRT1501728	hsa-miR-4755-3p	CLIP-seq
MIRT1501729	hsa-miR-4772-3p	CLIP-seq
MIRT1501731	hsa-miR-4781-3p	CLIP-seq
MIRT2150815	hsa-miR-548v	CLIP-seq
MIRT2371350	hsa-miR-1180	CLIP-seq
MIRT1501656	hsa-miR-1253	CLIP-seq
MIRT2371351	hsa-miR-1272	CLIP-seq
MIRT1501669	hsa-miR-1915	CLIP-seq
MIRT2371352	hsa-miR-197	CLIP-seq
MIRT1501670	hsa-miR-1976	CLIP-seq
MIRT1501674	hsa-miR-214	CLIP-seq
MIRT2150811	hsa-miR-221	CLIP-seq
MIRT2150812	hsa-miR-222	CLIP-seq
MIRT2371353	hsa-miR-224	CLIP-seq
MIRT2371354	hsa-miR-2355-5p	CLIP-seq
MIRT2371355	hsa-miR-23a	CLIP-seq
MIRT2371356	hsa-miR-23b	CLIP-seq
MIRT2371357	hsa-miR-23c	CLIP-seq
MIRT1501675	hsa-miR-24	CLIP-seq
MIRT2371358	hsa-miR-298	CLIP-seq
MIRT2371359	hsa-miR-299-3p	CLIP-seq
MIRT1501641	hsa-miR-3120-3p	CLIP-seq
MIRT1501678	hsa-miR-3128	CLIP-seq
MIRT2371360	hsa-miR-3143	CLIP-seq
MIRT2371361	hsa-miR-3148	CLIP-seq
MIRT1501682	hsa-miR-3149	CLIP-seq
MIRT1501686	hsa-miR-3187-3p	CLIP-seq
MIRT2371362	hsa-miR-3190	CLIP-seq
MIRT1501687	hsa-miR-3194-3p	CLIP-seq
MIRT2371363	hsa-miR-320a	CLIP-seq
MIRT2371364	hsa-miR-320b	CLIP-seq
MIRT2371365	hsa-miR-320c	CLIP-seq
MIRT2371366	hsa-miR-320d	CLIP-seq
MIRT2371367	hsa-miR-320e	CLIP-seq
MIRT2371368	hsa-miR-335	CLIP-seq
MIRT1501692	hsa-miR-3619-5p	CLIP-seq
MIRT1501697	hsa-miR-3663-5p	CLIP-seq
MIRT2371369	hsa-miR-3682-3p	CLIP-seq
MIRT2371370	hsa-miR-3692	CLIP-seq
MIRT2371371	hsa-miR-377	CLIP-seq
MIRT2371372	hsa-miR-378	CLIP-seq
MIRT2371373	hsa-miR-378b	CLIP-seq
MIRT2371374	hsa-miR-378c	CLIP-seq
MIRT2371375	hsa-miR-378d	CLIP-seq
MIRT2371376	hsa-miR-378e	CLIP-seq
MIRT2371377	hsa-miR-378f	CLIP-seq
MIRT2371378	hsa-miR-378h	CLIP-seq
MIRT2371379	hsa-miR-378i	CLIP-seq
MIRT1501701	hsa-miR-411	CLIP-seq
MIRT2371380	hsa-miR-422a	CLIP-seq
MIRT1501702	hsa-miR-4251	CLIP-seq
MIRT1501704	hsa-miR-4284	CLIP-seq
MIRT2371381	hsa-miR-4291	CLIP-seq
MIRT1501708	hsa-miR-4324	CLIP-seq
MIRT1501709	hsa-miR-4327	CLIP-seq
MIRT2371382	hsa-miR-4330	CLIP-seq
MIRT2371383	hsa-miR-4429	CLIP-seq
MIRT1501711	hsa-miR-4435	CLIP-seq
MIRT2371384	hsa-miR-4445	CLIP-seq
MIRT2371385	hsa-miR-4491	CLIP-seq
MIRT2371386	hsa-miR-451b	CLIP-seq
MIRT2371387	hsa-miR-4643	CLIP-seq
MIRT2371388	hsa-miR-4657	CLIP-seq
MIRT2371389	hsa-miR-4664-3p	CLIP-seq
MIRT2371390	hsa-miR-4695-3p	CLIP-seq
MIRT1501722	hsa-miR-4701-5p	CLIP-seq
MIRT1501724	hsa-miR-4716-5p	CLIP-seq
MIRT1501726	hsa-miR-4726-3p	CLIP-seq
MIRT1501728	hsa-miR-4755-3p	CLIP-seq
MIRT1501729	hsa-miR-4772-3p	CLIP-seq
MIRT2371391	hsa-miR-4778-5p	CLIP-seq
MIRT1501731	hsa-miR-4781-3p	CLIP-seq
MIRT1501734	hsa-miR-483-5p	CLIP-seq
MIRT2371392	hsa-miR-498	CLIP-seq
MIRT2371393	hsa-miR-5096	CLIP-seq
MIRT2371394	hsa-miR-520g	CLIP-seq
MIRT2371395	hsa-miR-543	CLIP-seq
MIRT1501739	hsa-miR-548s	CLIP-seq
MIRT2150815	hsa-miR-548v	CLIP-seq
MIRT1501740	hsa-miR-588	CLIP-seq
MIRT2371396	hsa-miR-760	CLIP-seq
MIRT1501747	hsa-miR-761	CLIP-seq
MIRT2371397	hsa-miR-922	CLIP-seq
MIRT1501654	hsa-miR-122	CLIP-seq
MIRT2397174	hsa-miR-1227	CLIP-seq
MIRT2397175	hsa-miR-149	CLIP-seq
MIRT2397176	hsa-miR-3064-5p	CLIP-seq
MIRT2397177	hsa-miR-3126-3p	CLIP-seq
MIRT1501679	hsa-miR-3135b	CLIP-seq
MIRT1501694	hsa-miR-3652	CLIP-seq
MIRT1501710	hsa-miR-4430	CLIP-seq
MIRT2150813	hsa-miR-4645-5p	CLIP-seq
MIRT2150814	hsa-miR-4673	CLIP-seq
MIRT2397178	hsa-miR-4715-3p	CLIP-seq
MIRT2397179	hsa-miR-4757-5p	CLIP-seq
MIRT2397180	hsa-miR-4794	CLIP-seq
MIRT1501661	hsa-miR-1343	CLIP-seq
MIRT2463765	hsa-miR-1910	CLIP-seq
MIRT1501675	hsa-miR-24	CLIP-seq
MIRT1501682	hsa-miR-3149	CLIP-seq
MIRT1501695	hsa-miR-3655	CLIP-seq
MIRT1501699	hsa-miR-378g	CLIP-seq
MIRT1501701	hsa-miR-411	CLIP-seq
MIRT1501704	hsa-miR-4284	CLIP-seq
MIRT1501712	hsa-miR-4437	CLIP-seq
MIRT1501715	hsa-miR-455-3p	CLIP-seq
MIRT1501717	hsa-miR-4674	CLIP-seq
MIRT1501727	hsa-miR-4735-5p	CLIP-seq
MIRT1501729	hsa-miR-4772-3p	CLIP-seq
MIRT1501730	hsa-miR-4775	CLIP-seq
MIRT2397180	hsa-miR-4794	CLIP-seq
MIRT1501734	hsa-miR-483-5p	CLIP-seq
MIRT1501741	hsa-miR-590-3p	CLIP-seq
MIRT2463766	hsa-miR-720	CLIP-seq
MIRT1501654	hsa-miR-122	CLIP-seq
MIRT1501656	hsa-miR-1253	CLIP-seq
MIRT2664729	hsa-miR-1254	CLIP-seq
MIRT1501657	hsa-miR-125a-5p	CLIP-seq
MIRT1501658	hsa-miR-125b	CLIP-seq
MIRT2664730	hsa-miR-1292	CLIP-seq
MIRT1501659	hsa-miR-1301	CLIP-seq
MIRT2664731	hsa-miR-1307	CLIP-seq
MIRT2664732	hsa-miR-141	CLIP-seq
MIRT1501667	hsa-miR-1470	CLIP-seq
MIRT2664733	hsa-miR-1537	CLIP-seq
MIRT2463765	hsa-miR-1910	CLIP-seq
MIRT2664734	hsa-miR-200a	CLIP-seq
MIRT1501674	hsa-miR-214	CLIP-seq
MIRT2371354	hsa-miR-2355-5p	CLIP-seq
MIRT2371355	hsa-miR-23a	CLIP-seq
MIRT2371356	hsa-miR-23b	CLIP-seq
MIRT2371357	hsa-miR-23c	CLIP-seq
MIRT1501675	hsa-miR-24	CLIP-seq
MIRT2664735	hsa-miR-3116	CLIP-seq
MIRT1501679	hsa-miR-3135b	CLIP-seq
MIRT2371360	hsa-miR-3143	CLIP-seq
MIRT1501682	hsa-miR-3149	CLIP-seq
MIRT2664736	hsa-miR-3154	CLIP-seq
MIRT2664737	hsa-miR-3160-3p	CLIP-seq
MIRT2664738	hsa-miR-3170	CLIP-seq
MIRT1501692	hsa-miR-3619-5p	CLIP-seq
MIRT1501694	hsa-miR-3652	CLIP-seq
MIRT2664739	hsa-miR-3653	CLIP-seq
MIRT2664740	hsa-miR-3658	CLIP-seq
MIRT2664741	hsa-miR-3664-3p	CLIP-seq
MIRT1501701	hsa-miR-411	CLIP-seq
MIRT1501702	hsa-miR-4251	CLIP-seq
MIRT2664742	hsa-miR-4254	CLIP-seq
MIRT1501704	hsa-miR-4284	CLIP-seq
MIRT2371381	hsa-miR-4291	CLIP-seq
MIRT2664743	hsa-miR-4305	CLIP-seq
MIRT1501707	hsa-miR-4319	CLIP-seq
MIRT1501708	hsa-miR-4324	CLIP-seq
MIRT1501709	hsa-miR-4327	CLIP-seq
MIRT1501710	hsa-miR-4430	CLIP-seq
MIRT2664744	hsa-miR-4433	CLIP-seq
MIRT2664745	hsa-miR-4436a	CLIP-seq
MIRT2664746	hsa-miR-4459	CLIP-seq
MIRT2664747	hsa-miR-4481	CLIP-seq
MIRT2664748	hsa-miR-451	CLIP-seq
MIRT1501715	hsa-miR-455-3p	CLIP-seq
MIRT1501716	hsa-miR-4633-3p	CLIP-seq
MIRT2664749	hsa-miR-4638-5p	CLIP-seq
MIRT2150813	hsa-miR-4645-5p	CLIP-seq
MIRT2664750	hsa-miR-4667-3p	CLIP-seq
MIRT2150814	hsa-miR-4673	CLIP-seq
MIRT2664751	hsa-miR-4690-3p	CLIP-seq
MIRT1501720	hsa-miR-4691-3p	CLIP-seq
MIRT2664752	hsa-miR-4713-5p	CLIP-seq
MIRT1501727	hsa-miR-4735-5p	CLIP-seq
MIRT2664753	hsa-miR-4745-5p	CLIP-seq
MIRT2664754	hsa-miR-4753-3p	CLIP-seq
MIRT2397179	hsa-miR-4757-5p	CLIP-seq
MIRT2664755	hsa-miR-4758-5p	CLIP-seq
MIRT2664756	hsa-miR-4761-3p	CLIP-seq
MIRT2664757	hsa-miR-4768-3p	CLIP-seq
MIRT1501729	hsa-miR-4772-3p	CLIP-seq
MIRT1501730	hsa-miR-4775	CLIP-seq
MIRT2371391	hsa-miR-4778-5p	CLIP-seq
MIRT2664758	hsa-miR-4779	CLIP-seq
MIRT2397180	hsa-miR-4794	CLIP-seq
MIRT1501734	hsa-miR-483-5p	CLIP-seq
MIRT1501736	hsa-miR-5047	CLIP-seq
MIRT2664759	hsa-miR-511	CLIP-seq
MIRT2371395	hsa-miR-543	CLIP-seq
MIRT1501741	hsa-miR-590-3p	CLIP-seq
MIRT2664760	hsa-miR-615-5p	CLIP-seq
MIRT2664761	hsa-miR-635	CLIP-seq
MIRT2664762	hsa-miR-661	CLIP-seq
MIRT1501747	hsa-miR-761	CLIP-seq
MIRT2371397	hsa-miR-922	CLIP-seq
MIRT1501654	hsa-miR-122	CLIP-seq
MIRT1501656	hsa-miR-1253	CLIP-seq
MIRT2664729	hsa-miR-1254	CLIP-seq
MIRT1501657	hsa-miR-125a-5p	CLIP-seq
MIRT1501658	hsa-miR-125b	CLIP-seq
MIRT1501659	hsa-miR-1301	CLIP-seq
MIRT2664731	hsa-miR-1307	CLIP-seq
MIRT2664732	hsa-miR-141	CLIP-seq
MIRT1501667	hsa-miR-1470	CLIP-seq
MIRT2664733	hsa-miR-1537	CLIP-seq
MIRT2463765	hsa-miR-1910	CLIP-seq
MIRT2664734	hsa-miR-200a	CLIP-seq
MIRT1501674	hsa-miR-214	CLIP-seq
MIRT2371354	hsa-miR-2355-5p	CLIP-seq
MIRT1501675	hsa-miR-24	CLIP-seq
MIRT2664735	hsa-miR-3116	CLIP-seq
MIRT1501679	hsa-miR-3135b	CLIP-seq
MIRT2371360	hsa-miR-3143	CLIP-seq
MIRT1501682	hsa-miR-3149	CLIP-seq
MIRT2664737	hsa-miR-3160-3p	CLIP-seq
MIRT2664738	hsa-miR-3170	CLIP-seq
MIRT1501692	hsa-miR-3619-5p	CLIP-seq
MIRT1501694	hsa-miR-3652	CLIP-seq
MIRT1501695	hsa-miR-3655	CLIP-seq
MIRT2664741	hsa-miR-3664-3p	CLIP-seq
MIRT1501701	hsa-miR-411	CLIP-seq
MIRT1501702	hsa-miR-4251	CLIP-seq
MIRT2664742	hsa-miR-4254	CLIP-seq
MIRT1501704	hsa-miR-4284	CLIP-seq
MIRT2371381	hsa-miR-4291	CLIP-seq
MIRT2664743	hsa-miR-4305	CLIP-seq
MIRT1501707	hsa-miR-4319	CLIP-seq
MIRT1501708	hsa-miR-4324	CLIP-seq
MIRT1501709	hsa-miR-4327	CLIP-seq
MIRT1501710	hsa-miR-4430	CLIP-seq
MIRT2664745	hsa-miR-4436a	CLIP-seq
MIRT2664747	hsa-miR-4481	CLIP-seq
MIRT1501715	hsa-miR-455-3p	CLIP-seq
MIRT1501716	hsa-miR-4633-3p	CLIP-seq
MIRT2664749	hsa-miR-4638-5p	CLIP-seq
MIRT2150813	hsa-miR-4645-5p	CLIP-seq
MIRT2664750	hsa-miR-4667-3p	CLIP-seq
MIRT2150814	hsa-miR-4673	CLIP-seq
MIRT2664751	hsa-miR-4690-3p	CLIP-seq
MIRT2664752	hsa-miR-4713-5p	CLIP-seq
MIRT1501727	hsa-miR-4735-5p	CLIP-seq
MIRT2664753	hsa-miR-4745-5p	CLIP-seq
MIRT2397179	hsa-miR-4757-5p	CLIP-seq
MIRT2664755	hsa-miR-4758-5p	CLIP-seq
MIRT1501729	hsa-miR-4772-3p	CLIP-seq
MIRT1501730	hsa-miR-4775	CLIP-seq
MIRT2371391	hsa-miR-4778-5p	CLIP-seq
MIRT2397180	hsa-miR-4794	CLIP-seq
MIRT1501734	hsa-miR-483-5p	CLIP-seq
MIRT1501736	hsa-miR-5047	CLIP-seq
MIRT2371395	hsa-miR-543	CLIP-seq
MIRT1501741	hsa-miR-590-3p	CLIP-seq
MIRT2664760	hsa-miR-615-5p	CLIP-seq
MIRT2664761	hsa-miR-635	CLIP-seq
MIRT2664762	hsa-miR-661	CLIP-seq
MIRT2463766	hsa-miR-720	CLIP-seq
MIRT1501747	hsa-miR-761	CLIP-seq
MIRT2371397	hsa-miR-922	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000785	Component	Chromatin	ISA
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	17220279
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	ISA
GO:0001228	Function	DNA-binding transcription activator activity, RNA polymerase II-specific	IDA	17220279
GO:0003677	Function	DNA binding	IEA
GO:0003712	Function	Transcription coregulator activity	IDA	25210186
GO:0003713	Function	Transcription coactivator activity	IDA	27068747
GO:0003713	Function	Transcription coactivator activity	IMP	17209048
GO:0005515	Function	Protein binding	IPI	16713569, 17209048, 21516116, 21900206, 25210186, 25416956, 25910212, 27068747, 28514442, 32296183, 33961781
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IDA	17209048
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005813	Component	Centrosome	IDA
GO:0006355	Process	Regulation of DNA-templated transcription	IDA	25210186, 27068747
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0016605	Component	PML body	IDA	25210186, 27068747
GO:0016605	Component	PML body	IEA
GO:0016740	Function	Transferase activity	IEA
GO:0016925	Process	Protein sumoylation	IEA
GO:0016925	Process	Protein sumoylation	TAS
GO:0019789	Function	SUMO transferase activity	EXP	27068747
GO:0031965	Component	Nuclear membrane	IDA
GO:0042802	Function	Identical protein binding	IPI	17209048, 25416956, 32296183
GO:0043565	Function	Sequence-specific DNA binding	IDA	23332764
GO:0044828	Process	Host-mediated suppression of viral genome replication	IDA	25210186
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IDA	17220279
GO:0046872	Function	Metal ion binding	IEA
GO:0046983	Function	Protein dimerization activity	IEA
GO:0061665	Function	SUMO ligase activity	IDA	27068747
GO:1990466	Process	Protein autosumoylation	IMP	27068747
GO:1990837	Function	Sequence-specific double-stranded DNA binding	IDA	28473536

Other IDs

• MIM: 300178
• HGNC: 447
• e!Ensembl: ENSG00000214717

Protein

• UniProt ID: O96006
• Protein name: E3 SUMO-protein ligase ZBED1 (EC 2.3.2.-) (DNA replication-related element-binding factor) (Putative Ac-like transposable element) (Zinc finger BED domain-containing protein 1) (dREF homolog)
• Protein function: Functions as an E3-type small ubiquitin-like modifier (SUMO) ligase which sumoylates CHD3/Mi2-alpha, causing its release from DNA (PubMed:27068747). This results in suppression of CHD3/Mi2-alpha transcription repression, increased recruitment of
• PDB: 2CT5
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF02892	zf-BED	23 → 72	BED zinc finger	Domain
  PF05699	Dimer_Tnp_hAT	571 → 651	hAT family C-terminal dimerisation region	Domain

• Tissue specificity: TISSUE SPECIFICITY: Ubiquitously expressed at low levels (PubMed:9887332). Expression is highest in skeletal muscle, heart, spleen and placenta (PubMed:9887332). {ECO:0000269|PubMed:9887332}.
• Sequence:

  MENKSLESSQTDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
  SNLSYHLEKNHPEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGYDS
  KKQQELTAAVLGLICEGLYPASIVDEPTFKVLLKTADPRYELPSRKYISTKAIPEKYGAV
  REVILKELAEATWCGISTDMWRSENQNRAYVTLAAHFLGLGAPNCLSMGSRCLKTFEVPE
  ENTAETITRVLYEVFIEWGISAKVFGATTNYGKDIVKACSLLDVAVHMPCLGHTFNAGIQ
  QAFQLPKLGALLSRCRKLVEYFQQSAVAMYMLYEKQKQQNVAHCMLVSNRVSWWGSTLAM
  LQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGLVELLQPFKQVAEMLSASRYPTIS
  MVKPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKTYQETPEIDMFLNVATFLDPRYK
  RLPFLSAFERQQVENRVVEEAKGLLDKVKDGGYRPAEDKIFPVPEEPPVKKLMRTSTPPP
  ASVINNMLAEIFCQTGGVEDQEEWHAQVVEELSNFKSQKVLGLNEDPLKWWSDRLALFPL
  LPKVLQKYWCVTATRVAPERLFGSAANVVSAKRNRLAPAHVDEQVFLYENARSGAEAEPE
  DQDEGEWGLDQEQVFSLGDGVSGGFFGIRDSSFL

• Sequence length: 694

Pathways

Reactome:

SUMOylation of chromatin organization proteins

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
PROSTATIC NEOPLASMS	—	CTD	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Adenocarcinoma	Adenocarcinoma	BEFREE	17638871, 19701244, 27634876, 30188869		★☆☆☆☆ Found in Text Mining only
Adenocarcinoma of prostate	Prostate adenocarcinoma	BEFREE	23842593, 27980106, 28095711		★☆☆☆☆ Found in Text Mining only
Carcinoma	Carcinoma	BEFREE	16452231, 28197388		★☆☆☆☆ Found in Text Mining only
Carcinoma, Neuroendocrine	Carcinoma	BEFREE	25298407		★☆☆☆☆ Found in Text Mining only
Diabetes Mellitus, Non-Insulin-Dependent	Diabetes Mellitus	BEFREE	27292155		★☆☆☆☆ Found in Text Mining only
Familial lichen amyloidosis	Lichen amyloidosis	BEFREE	27207648		★☆☆☆☆ Found in Text Mining only
Febrile Convulsions	Febrile seizures	BEFREE	16417553		★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of prostate	Prostate cancer	BEFREE	11289132, 15678150, 15761871, 15870705, 16452231, 16927305, 17638871, 17906287, 18649357, 18668517, 18718531, 19147983, 19351827, 19784068, 19879420, 20172545, 20333450, 21625214, 21671747, 21681779, 21856747, 21980391, 22095517, 22210719, 22761195, 22896667, 23349020, 24980820, 25125658, 25266896, 25349289, 25646304, 25912421, 26387951, 26719530, 27292155, 27634876, 27935821, 27980106, 28095711, 28249898, 28493878, 28674082, 29082675, 29228771, 29247555, 29383141, 29848555, 29861778, 29890952, 31052319, 31069149, 31188872, 31215992, 31417189, 31449679		★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of prostate	Prostate cancer	CTD_human_DG	17199135		★☆☆☆☆ Found in Text Mining only
Malignant Neoplasms	Malignant Neoplasm	BEFREE	22761195, 24980820, 29400635, 29450905, 29870225		★☆☆☆☆ Found in Text Mining only
Neoplasms	Neoplasms	BEFREE	11289132, 16278413, 16452231, 17131319, 18668517, 19351755, 19351827, 20172545, 21586128, 21671747, 22470535, 23441198, 25712054, 26026087, 26494858, 28176411, 28512172, 28540811, 29118380, 29137286, 29450905, 29752021, 29861778, 29900060, 30073695, 30188869, 30824610, 31215992, 31299353		★☆☆☆☆ Found in Text Mining only
Neuroendocrine Tumors	Neuroendocrine Tumors	BEFREE	30188869		★☆☆☆☆ Found in Text Mining only
Obesity	Obesity	BEFREE	31188872		★☆☆☆☆ Found in Text Mining only
Phyllodes Tumor	Phyllodes Tumor	BEFREE	27980106		★☆☆☆☆ Found in Text Mining only
Prostate carcinoma	Prostate cancer	BEFREE	11289132, 15678150, 15761871, 15870705, 16452231, 16927305, 17638871, 17906287, 18649357, 18668517, 18718531, 19147983, 19351827, 19784068, 19879420, 20172545, 20333450, 21625214, 21671747, 21681779, 21856747, 21980391, 22095517, 22210719, 22761195, 23349020, 24980820, 25125658, 25266896, 25349289, 25646304, 25912421, 26387951, 26719530, 27292155, 27634876, 27935821, 27980106, 28095711, 28493878, 28674082, 29082675, 29228771, 29247555, 29383141, 29752021, 29848555, 29861778, 29890952, 31052319, 31069149, 31188872, 31215992, 31417189, 31449679		★☆☆☆☆ Found in Text Mining only
Prostatic Intraepithelial Neoplasias	Prostatic Neoplasms	BEFREE	26418896, 28493878		★☆☆☆☆ Found in Text Mining only
Prostatic Neoplasms	Prostatic Neoplasms	BEFREE	14751836, 15761871, 16179929, 18723670, 20609350, 21625214, 22470535, 23441198, 24980820, 27232975, 27634876, 28095711, 29861778, 31168562, 31299353		★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Prostatic Neoplasms	Prostatic Neoplasms	CTD_human_DG	17199135		★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Status Epilepticus	Status Epilepticus	BEFREE	16417553		★☆☆☆☆ Found in Text Mining only
Vesicular Stomatitis	Vesicular Stomatitis	BEFREE	20172545		★☆☆☆☆ Found in Text Mining only