Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID	91522
Gene name	Collagen type XXIII alpha 1 chain
Gene symbol	COL23A1
Synonyms (NCBI Gene)	-
Chromosome	5
Chromosome location	5q35.3
Summary	COL23A1 is a member of the transmembrane collagens, a subfamily of the nonfibrillar collagens that contain a single pass hydrophobic transmembrane domain (Banyard et al., 2003 [PubMed 12644459]).[supplied by OMIM, Mar 2008]

293

Show/Hide all (293)

miRTarBase ID	miRNA	Experiments	Reference
MIRT499047	hsa-miR-4438	PAR-CLIP	20371350
MIRT499045	hsa-miR-501-3p	PAR-CLIP	20371350
MIRT499046	hsa-miR-502-3p	PAR-CLIP	20371350
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	20371350
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	20371350
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	20371350
MIRT499040	hsa-miR-767-5p	PAR-CLIP	20371350
MIRT499041	hsa-miR-5095	PAR-CLIP	20371350
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	20371350
MIRT499048	hsa-miR-32-3p	PAR-CLIP	20371350
MIRT499047	hsa-miR-4438	PAR-CLIP	20371350
MIRT499045	hsa-miR-501-3p	PAR-CLIP	20371350
MIRT499046	hsa-miR-502-3p	PAR-CLIP	20371350
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	20371350
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	20371350
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	20371350
MIRT499040	hsa-miR-767-5p	PAR-CLIP	20371350
MIRT499041	hsa-miR-5095	PAR-CLIP	20371350
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	20371350
MIRT454627	hsa-miR-4714-3p	PAR-CLIP	20371350
MIRT454623	hsa-miR-4680-5p	PAR-CLIP	20371350
MIRT454622	hsa-miR-8086	PAR-CLIP	20371350
MIRT454621	hsa-miR-4474-5p	PAR-CLIP	20371350
MIRT454620	hsa-miR-676-5p	PAR-CLIP	20371350
MIRT499048	hsa-miR-32-3p	PAR-CLIP	20371350
MIRT499047	hsa-miR-4438	PAR-CLIP	20371350
MIRT499045	hsa-miR-501-3p	PAR-CLIP	20371350
MIRT499046	hsa-miR-502-3p	PAR-CLIP	20371350
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	20371350
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	20371350
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	20371350
MIRT499040	hsa-miR-767-5p	PAR-CLIP	20371350
MIRT499041	hsa-miR-5095	PAR-CLIP	20371350
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	20371350
MIRT499048	hsa-miR-32-3p	PAR-CLIP	21572407
MIRT499047	hsa-miR-4438	PAR-CLIP	21572407
MIRT499045	hsa-miR-501-3p	PAR-CLIP	21572407
MIRT499046	hsa-miR-502-3p	PAR-CLIP	21572407
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	21572407
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	21572407
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	21572407
MIRT499040	hsa-miR-767-5p	PAR-CLIP	21572407
MIRT499041	hsa-miR-5095	PAR-CLIP	21572407
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	21572407
MIRT499048	hsa-miR-32-3p	PAR-CLIP	21572407
MIRT499047	hsa-miR-4438	PAR-CLIP	21572407
MIRT499045	hsa-miR-501-3p	PAR-CLIP	21572407
MIRT499046	hsa-miR-502-3p	PAR-CLIP	21572407
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	21572407
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	21572407
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	21572407
MIRT499040	hsa-miR-767-5p	PAR-CLIP	21572407
MIRT499041	hsa-miR-5095	PAR-CLIP	21572407
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	21572407
MIRT454627	hsa-miR-4714-3p	PAR-CLIP	22012620
MIRT454626	hsa-miR-3155a	PAR-CLIP	22012620
MIRT454625	hsa-miR-3155b	PAR-CLIP	22012620
MIRT454624	hsa-miR-484	PAR-CLIP	22012620
MIRT454623	hsa-miR-4680-5p	PAR-CLIP	22012620
MIRT454622	hsa-miR-8086	PAR-CLIP	22012620
MIRT454621	hsa-miR-4474-5p	PAR-CLIP	22012620
MIRT454620	hsa-miR-676-5p	PAR-CLIP	22012620
MIRT499047	hsa-miR-4438	PAR-CLIP	22012620
MIRT499045	hsa-miR-501-3p	PAR-CLIP	22012620
MIRT499046	hsa-miR-502-3p	PAR-CLIP	22012620
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	22012620
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	22012620
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	22012620
MIRT499040	hsa-miR-767-5p	PAR-CLIP	22012620
MIRT499041	hsa-miR-5095	PAR-CLIP	22012620
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	22012620
MIRT499047	hsa-miR-4438	PAR-CLIP	23446348
MIRT499045	hsa-miR-501-3p	PAR-CLIP	23446348
MIRT499046	hsa-miR-502-3p	PAR-CLIP	23446348
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	23446348
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	23446348
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	23446348
MIRT499040	hsa-miR-767-5p	PAR-CLIP	23446348
MIRT499041	hsa-miR-5095	PAR-CLIP	23446348
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT454627	hsa-miR-4714-3p	PAR-CLIP	23446348
MIRT454623	hsa-miR-4680-5p	PAR-CLIP	23446348
MIRT454622	hsa-miR-8086	PAR-CLIP	23446348
MIRT454621	hsa-miR-4474-5p	PAR-CLIP	23446348
MIRT454620	hsa-miR-676-5p	PAR-CLIP	23446348
MIRT499047	hsa-miR-4438	PAR-CLIP	23446348
MIRT499045	hsa-miR-501-3p	PAR-CLIP	23446348
MIRT499046	hsa-miR-502-3p	PAR-CLIP	23446348
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	23446348
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	23446348
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	23446348
MIRT499040	hsa-miR-767-5p	PAR-CLIP	23446348
MIRT499041	hsa-miR-5095	PAR-CLIP	23446348
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT499048	hsa-miR-32-3p	PAR-CLIP	23446348
MIRT499047	hsa-miR-4438	PAR-CLIP	23446348
MIRT499045	hsa-miR-501-3p	PAR-CLIP	23446348
MIRT499046	hsa-miR-502-3p	PAR-CLIP	23446348
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	23446348
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	23446348
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	23446348
MIRT499040	hsa-miR-767-5p	PAR-CLIP	23446348
MIRT499041	hsa-miR-5095	PAR-CLIP	23446348
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT499048	hsa-miR-32-3p	PAR-CLIP	23446348
MIRT499047	hsa-miR-4438	PAR-CLIP	23446348
MIRT499045	hsa-miR-501-3p	PAR-CLIP	23446348
MIRT499046	hsa-miR-502-3p	PAR-CLIP	23446348
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	23446348
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	23446348
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	23446348
MIRT499040	hsa-miR-767-5p	PAR-CLIP	23446348
MIRT499041	hsa-miR-5095	PAR-CLIP	23446348
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT499048	hsa-miR-32-3p	PAR-CLIP	24398324
MIRT499047	hsa-miR-4438	PAR-CLIP	24398324
MIRT499045	hsa-miR-501-3p	PAR-CLIP	24398324
MIRT499046	hsa-miR-502-3p	PAR-CLIP	24398324
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	24398324
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	24398324
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	24398324
MIRT499040	hsa-miR-767-5p	PAR-CLIP	24398324
MIRT499041	hsa-miR-5095	PAR-CLIP	24398324
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	24398324
MIRT454627	hsa-miR-4714-3p	PAR-CLIP	23592263
MIRT454623	hsa-miR-4680-5p	PAR-CLIP	23592263
MIRT454622	hsa-miR-8086	PAR-CLIP	23592263
MIRT454621	hsa-miR-4474-5p	PAR-CLIP	23592263
MIRT454620	hsa-miR-676-5p	PAR-CLIP	23592263
MIRT454627	hsa-miR-4714-3p	PAR-CLIP	23592263
MIRT454626	hsa-miR-3155a	PAR-CLIP	23592263
MIRT454625	hsa-miR-3155b	PAR-CLIP	23592263
MIRT454624	hsa-miR-484	PAR-CLIP	23592263
MIRT454623	hsa-miR-4680-5p	PAR-CLIP	23592263
MIRT454622	hsa-miR-8086	PAR-CLIP	23592263
MIRT454621	hsa-miR-4474-5p	PAR-CLIP	23592263
MIRT454620	hsa-miR-676-5p	PAR-CLIP	23592263
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	27292025
MIRT499048	hsa-miR-32-3p	PAR-CLIP	27292025
MIRT499047	hsa-miR-4438	PAR-CLIP	27292025
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	27292025
MIRT499045	hsa-miR-501-3p	PAR-CLIP	27292025
MIRT499046	hsa-miR-502-3p	PAR-CLIP	27292025
MIRT499041	hsa-miR-5095	PAR-CLIP	27292025
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	27292025
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	27292025
MIRT499040	hsa-miR-767-5p	PAR-CLIP	27292025
MIRT499047	hsa-miR-4438	PAR-CLIP	20371350
MIRT499045	hsa-miR-501-3p	PAR-CLIP	20371350
MIRT499046	hsa-miR-502-3p	PAR-CLIP	20371350
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	20371350
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	20371350
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	20371350
MIRT499040	hsa-miR-767-5p	PAR-CLIP	20371350
MIRT499041	hsa-miR-5095	PAR-CLIP	20371350
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	20371350
MIRT499048	hsa-miR-32-3p	PAR-CLIP	20371350
MIRT499047	hsa-miR-4438	PAR-CLIP	20371350
MIRT499045	hsa-miR-501-3p	PAR-CLIP	20371350
MIRT499046	hsa-miR-502-3p	PAR-CLIP	20371350
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	20371350
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	20371350
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	20371350
MIRT499040	hsa-miR-767-5p	PAR-CLIP	20371350
MIRT499041	hsa-miR-5095	PAR-CLIP	20371350
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	20371350
MIRT454627	hsa-miR-4714-3p	PAR-CLIP	20371350
MIRT454623	hsa-miR-4680-5p	PAR-CLIP	20371350
MIRT454622	hsa-miR-8086	PAR-CLIP	20371350
MIRT454621	hsa-miR-4474-5p	PAR-CLIP	20371350
MIRT454620	hsa-miR-676-5p	PAR-CLIP	20371350
MIRT499048	hsa-miR-32-3p	PAR-CLIP	20371350
MIRT499047	hsa-miR-4438	PAR-CLIP	20371350
MIRT499045	hsa-miR-501-3p	PAR-CLIP	20371350
MIRT499046	hsa-miR-502-3p	PAR-CLIP	20371350
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	20371350
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	20371350
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	20371350
MIRT499040	hsa-miR-767-5p	PAR-CLIP	20371350
MIRT499041	hsa-miR-5095	PAR-CLIP	20371350
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	20371350
MIRT499048	hsa-miR-32-3p	PAR-CLIP	21572407
MIRT499047	hsa-miR-4438	PAR-CLIP	21572407
MIRT499045	hsa-miR-501-3p	PAR-CLIP	21572407
MIRT499046	hsa-miR-502-3p	PAR-CLIP	21572407
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	21572407
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	21572407
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	21572407
MIRT499040	hsa-miR-767-5p	PAR-CLIP	21572407
MIRT499041	hsa-miR-5095	PAR-CLIP	21572407
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	21572407
MIRT499048	hsa-miR-32-3p	PAR-CLIP	21572407
MIRT499047	hsa-miR-4438	PAR-CLIP	21572407
MIRT499045	hsa-miR-501-3p	PAR-CLIP	21572407
MIRT499046	hsa-miR-502-3p	PAR-CLIP	21572407
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	21572407
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	21572407
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	21572407
MIRT499040	hsa-miR-767-5p	PAR-CLIP	21572407
MIRT499041	hsa-miR-5095	PAR-CLIP	21572407
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	21572407
MIRT454627	hsa-miR-4714-3p	PAR-CLIP	22012620
MIRT454626	hsa-miR-3155a	PAR-CLIP	22012620
MIRT454625	hsa-miR-3155b	PAR-CLIP	22012620
MIRT454624	hsa-miR-484	PAR-CLIP	22012620
MIRT454623	hsa-miR-4680-5p	PAR-CLIP	22012620
MIRT454622	hsa-miR-8086	PAR-CLIP	22012620
MIRT454621	hsa-miR-4474-5p	PAR-CLIP	22012620
MIRT454620	hsa-miR-676-5p	PAR-CLIP	22012620
MIRT499047	hsa-miR-4438	PAR-CLIP	22012620
MIRT499045	hsa-miR-501-3p	PAR-CLIP	22012620
MIRT499046	hsa-miR-502-3p	PAR-CLIP	22012620
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	22012620
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	22012620
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	22012620
MIRT499040	hsa-miR-767-5p	PAR-CLIP	22012620
MIRT499041	hsa-miR-5095	PAR-CLIP	22012620
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	22012620
MIRT499047	hsa-miR-4438	PAR-CLIP	23446348
MIRT499045	hsa-miR-501-3p	PAR-CLIP	23446348
MIRT499046	hsa-miR-502-3p	PAR-CLIP	23446348
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	23446348
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	23446348
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	23446348
MIRT499040	hsa-miR-767-5p	PAR-CLIP	23446348
MIRT499041	hsa-miR-5095	PAR-CLIP	23446348
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT454627	hsa-miR-4714-3p	PAR-CLIP	23446348
MIRT454623	hsa-miR-4680-5p	PAR-CLIP	23446348
MIRT454622	hsa-miR-8086	PAR-CLIP	23446348
MIRT454621	hsa-miR-4474-5p	PAR-CLIP	23446348
MIRT454620	hsa-miR-676-5p	PAR-CLIP	23446348
MIRT499047	hsa-miR-4438	PAR-CLIP	23446348
MIRT499045	hsa-miR-501-3p	PAR-CLIP	23446348
MIRT499046	hsa-miR-502-3p	PAR-CLIP	23446348
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	23446348
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	23446348
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	23446348
MIRT499040	hsa-miR-767-5p	PAR-CLIP	23446348
MIRT499041	hsa-miR-5095	PAR-CLIP	23446348
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT499048	hsa-miR-32-3p	PAR-CLIP	23446348
MIRT499047	hsa-miR-4438	PAR-CLIP	23446348
MIRT499045	hsa-miR-501-3p	PAR-CLIP	23446348
MIRT499046	hsa-miR-502-3p	PAR-CLIP	23446348
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	23446348
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	23446348
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	23446348
MIRT499040	hsa-miR-767-5p	PAR-CLIP	23446348
MIRT499041	hsa-miR-5095	PAR-CLIP	23446348
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT499048	hsa-miR-32-3p	PAR-CLIP	23446348
MIRT499047	hsa-miR-4438	PAR-CLIP	23446348
MIRT499045	hsa-miR-501-3p	PAR-CLIP	23446348
MIRT499046	hsa-miR-502-3p	PAR-CLIP	23446348
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	23446348
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	23446348
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	23446348
MIRT499040	hsa-miR-767-5p	PAR-CLIP	23446348
MIRT499041	hsa-miR-5095	PAR-CLIP	23446348
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT499048	hsa-miR-32-3p	PAR-CLIP	24398324
MIRT499047	hsa-miR-4438	PAR-CLIP	24398324
MIRT499045	hsa-miR-501-3p	PAR-CLIP	24398324
MIRT499046	hsa-miR-502-3p	PAR-CLIP	24398324
MIRT499044	hsa-miR-6504-3p	PAR-CLIP	24398324
MIRT499043	hsa-miR-1224-3p	PAR-CLIP	24398324
MIRT499042	hsa-miR-4735-5p	PAR-CLIP	24398324
MIRT499040	hsa-miR-767-5p	PAR-CLIP	24398324
MIRT499041	hsa-miR-5095	PAR-CLIP	24398324
MIRT499039	hsa-miR-7151-3p	PAR-CLIP	24398324
MIRT454627	hsa-miR-4714-3p	PAR-CLIP	23592263
MIRT454623	hsa-miR-4680-5p	PAR-CLIP	23592263
MIRT454622	hsa-miR-8086	PAR-CLIP	23592263
MIRT454621	hsa-miR-4474-5p	PAR-CLIP	23592263
MIRT454620	hsa-miR-676-5p	PAR-CLIP	23592263
MIRT454627	hsa-miR-4714-3p	PAR-CLIP	23592263
MIRT454626	hsa-miR-3155a	PAR-CLIP	23592263
MIRT454625	hsa-miR-3155b	PAR-CLIP	23592263
MIRT454624	hsa-miR-484	PAR-CLIP	23592263
MIRT454623	hsa-miR-4680-5p	PAR-CLIP	23592263
MIRT454622	hsa-miR-8086	PAR-CLIP	23592263
MIRT454621	hsa-miR-4474-5p	PAR-CLIP	23592263
MIRT454620	hsa-miR-676-5p	PAR-CLIP	23592263
MIRT1967719	hsa-miR-4693-3p	CLIP-seq
MIRT2203539	hsa-miR-4643	CLIP-seq
MIRT2203540	hsa-miR-466	CLIP-seq
MIRT2203541	hsa-miR-4749-3p	CLIP-seq
MIRT2203542	hsa-miR-4789-3p	CLIP-seq
MIRT2203539	hsa-miR-4643	CLIP-seq
MIRT2203540	hsa-miR-466	CLIP-seq
MIRT2203541	hsa-miR-4749-3p	CLIP-seq
MIRT2203542	hsa-miR-4789-3p	CLIP-seq

Show/Hide all (15)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	25416956
GO:0005581	Component	Collagen trimer	IEA
GO:0005615	Component	Extracellular space	IEA
GO:0005788	Component	Endoplasmic reticulum lumen	IEA
GO:0005788	Component	Endoplasmic reticulum lumen	TAS
GO:0005886	Component	Plasma membrane	IEA
GO:0005886	Component	Plasma membrane	TAS
GO:0008201	Function	Heparin binding	IEA
GO:0009986	Component	Cell surface	IEA
GO:0016020	Component	Membrane	IEA
GO:0030020	Function	Extracellular matrix structural constituent conferring tensile strength	IBA
GO:0030020	Function	Extracellular matrix structural constituent conferring tensile strength	RCA	25037231
GO:0031012	Component	Extracellular matrix	HDA	25037231
GO:0031012	Component	Extracellular matrix	IBA
GO:0042802	Function	Identical protein binding	IEA

MIM	HGNC	e!Ensembl
610043	22990	ENSG00000050767

Q86Y22

Protein name

Collagen alpha-1(XXIII) chain

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF01391	Collagen	117 → 173	Collagen triple helix repeat (20 copies)	Repeat
PF01391	Collagen	196 → 257	Collagen triple helix repeat (20 copies)	Repeat
PF01391	Collagen	250 → 307	Collagen triple helix repeat (20 copies)	Repeat
PF01391	Collagen	317 → 377	Collagen triple helix repeat (20 copies)	Repeat
PF01391	Collagen	342 → 400	Collagen triple helix repeat (20 copies)	Repeat
PF01391	Collagen	410 → 471	Collagen triple helix repeat (20 copies)	Repeat
PF01391	Collagen	463 → 532	Collagen triple helix repeat (20 copies)	Repeat

Sequence

MGPGERAGGGGDAGKGNAAGGGGGGRSATTAGSRAVSALCLLLSVGSAAACLLLGVQAAA
LQGRVAALEEERELLRRAGPPGALDAWAEPHLERLLREKLDGLAKIRTAREAPSECVCPP
GPPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPRGDQGQD
GAAGPPGPPGPPGARGPPGDTGKDGPRGAQGPAGPKGEPGQDGEMGPKGPPGPKGEPGVP
GKKGDDGTPSQPGPPGPKGEPGSMGPRGENGVDGAPGPKGEPGHRGTDGAAGPRGAPGLK
GEQGDTVVIDYDGRILDALKGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGQKG
DPGEPGPAGLKGEAGEMGLSGLPGADGLKGEKGESASDSLQESLAQLIVEPGPPGPPGPP
GPMGLQGIQGPKGLDGAKGEKGASGERGPSGLPGPVGPPGLIGLPGTKGEKGRPGEPGLD
GFPGPRGEKGDRSERGEKGERGVPGRKGVKGQKGEPGPPGLDQPCPVGPDGLPVPGCWHK

Sequence length

540

Interactions

View interactions

	KEGG		Reactome
	Protein digestion and absorption		Collagen biosynthesis and modifying enzymes Collagen chain trimerization

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (16)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
ANDROGENETIC ALOPECIA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
ASTROCYTOMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
BULIMIA NERVOSA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
CARDIAC EMBOLISM	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
CARDIOEMBOLIC STROKE	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
CENTRAL NERVOUS SYSTEM CANCER	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
GLIOBLASTOMA MULTIFORME	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
GLIOMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
INSOMNIA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
OBESITY	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PROSTATE CANCER	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PROSTATE CANCER, FAMILIAL	—	CTD	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PROSTATE CARCINOMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PSYCHIATRIC DISORDER	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
SCOLIOSIS	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Vascular endothelial growth factor (VEGF) inhibitor response	association	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (10)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Cardiomyopathy Dilated	Dilated cardiomyopathy	Pubtator	27936202	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Conventional (Clear Cell) Renal Cell Carcinoma	Renal Carcinoma	BEFREE	28852123, 29651135		★★★★★ ★☆☆☆☆ Found in Text Mining only
Leukemia Myeloid Acute	Myeloid leukemia	Pubtator	38163849	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Leukemia, Myelocytic, Acute	Leukemia	GWASCAT_DG	27903959		★★★★★ ★☆☆☆☆ Found in Text Mining only
Neoplasms	Neoplasms	BEFREE	28852123		★★★★★ ★☆☆☆☆ Found in Text Mining only
Prostate cancer, familial	Prostate cancer	CTD_human_DG	29892016		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PROSTATE CANCER, HEREDITARY, 1	Prostate Cancer, Hereditary	CTD_human_DG	29892016		★★★★★ ★☆☆☆☆ Found in Text Mining only
Prostate carcinoma	Prostate cancer	GWASCAT_DG	29892016		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Scleroderma Diffuse	Scleroderma	Pubtator	24812288	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Thyroid Neoplasms	Thyroid cancer	Pubtator	34167437	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only

COL23A1 (collagen type XXIII alpha 1 chain)