VCY (variable charge Y-linked)

Gene Gene information from NCBI Gene database.
Gene Gene ontology Other IDs Associated diseases
Entrez ID 9084
Gene name Variable charge Y-linked
Gene symbol VCY
Synonyms (NCBI Gene)
BPY1VCY1VCY1A
Chromosome Y
Chromosome location Yq11.221
Summary The protein encoded by this gene is a member of a family of human VCX/Y genes. This gene family has multiple members on both X and Y chromosomes, and all are expressed exclusively in male germ cells. Members of the VCX/Y family share a high degree of sequ
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
2
Gene Gene ontology Other IDs Associated diseases
Show/Hide all (2)
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 32814053
GO:0007420 Process Brain development IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
Gene Gene ontology Other IDs Associated diseases
MIM HGNC e!Ensembl
400012 12668 ENSG00000129864
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
2
Gene Gene ontology Other IDs Associated diseases
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Show/Hide Unknown Diseases (2)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
SPERMATOGENIC FAILURE, NONOBSTRUCTIVE, Y-LINKED — CTD
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
SPERMATOGENIC FAILURE, Y-LINKED, 2 — ClinVar, HPO
ClinVar, HPO
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Show/Hide Text Mining Associations (5)
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Azoospermia Azoospermia HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Glioma Glioma Pubtator 29453317 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Intellectual Disability Mental retardation BEFREE 15888481
★★★★★
★☆☆☆☆
Found in Text Mining only
Mental Retardation Mental retardation BEFREE 15888481
★★★★★
★☆☆☆☆
Found in Text Mining only
Spermatogenic Failure, Nonobstructive, Y-Linked Nonobstructive Spermatogenic Failure, Y-Linked CTD_human_DG
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations