TRIM4 (tripartite motif containing 4)

Gene

• Entrez ID: 89122
• Gene name: Tripartite motif containing 4
• Gene symbol: TRIM4
• Synonyms (NCBI Gene): RNF87
• Chromosome: 7
• Chromosome location: 7q22.1
• Summary: The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. The protein localizes to cytoplasmic bodies. Its f

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT022481	hsa-miR-124-3p	Microarray	18668037
MIRT027884	hsa-miR-96-5p	Sequencing	20371350
MIRT051223	hsa-miR-16-5p	CLASH	23622248
MIRT529266	hsa-miR-5583-3p	PAR-CLIP	20371350
MIRT529265	hsa-miR-889-5p	PAR-CLIP	20371350
MIRT529264	hsa-miR-135a-5p	PAR-CLIP	20371350
MIRT529263	hsa-miR-135b-5p	PAR-CLIP	20371350
MIRT529262	hsa-miR-584-3p	PAR-CLIP	20371350
MIRT529261	hsa-miR-4277	PAR-CLIP	20371350
MIRT529260	hsa-miR-323b-3p	PAR-CLIP	20371350
MIRT529259	hsa-miR-4797-3p	PAR-CLIP	20371350
MIRT529258	hsa-miR-4264	PAR-CLIP	20371350
MIRT529257	hsa-miR-604	PAR-CLIP	20371350
MIRT529256	hsa-miR-6762-3p	PAR-CLIP	20371350
MIRT529255	hsa-miR-124-5p	PAR-CLIP	20371350
MIRT529254	hsa-miR-2117	PAR-CLIP	20371350
MIRT529253	hsa-miR-647	PAR-CLIP	20371350
MIRT529252	hsa-miR-4273	PAR-CLIP	20371350
MIRT529251	hsa-miR-7156-5p	PAR-CLIP	20371350
MIRT223296	hsa-miR-3606-3p	PAR-CLIP	21572407
MIRT223293	hsa-miR-513a-3p	PAR-CLIP	21572407
MIRT223295	hsa-miR-513c-3p	PAR-CLIP	21572407
MIRT551009	hsa-miR-100-3p	PAR-CLIP	21572407
MIRT529250	hsa-miR-651-3p	PAR-CLIP	21572407
MIRT551008	hsa-miR-4453	PAR-CLIP	21572407
MIRT551007	hsa-miR-4538	PAR-CLIP	21572407
MIRT551006	hsa-miR-410-3p	PAR-CLIP	21572407
MIRT529247	hsa-miR-3065-5p	PAR-CLIP	21572407
MIRT529246	hsa-miR-5003-5p	PAR-CLIP	21572407
MIRT551005	hsa-miR-8060	PAR-CLIP	21572407
MIRT551004	hsa-miR-1252-5p	PAR-CLIP	21572407
MIRT551003	hsa-miR-3622b-5p	PAR-CLIP	21572407
MIRT529244	hsa-miR-7159-5p	PAR-CLIP	21572407
MIRT529243	hsa-miR-505-3p	PAR-CLIP	21572407
MIRT529242	hsa-miR-421	PAR-CLIP	21572407
MIRT529241	hsa-miR-513b-5p	PAR-CLIP	21572407
MIRT551002	hsa-miR-4642	PAR-CLIP	21572407
MIRT223275	hsa-miR-1305	PAR-CLIP	21572407
MIRT223276	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT544493	hsa-miR-1244	PAR-CLIP	21572407
MIRT544492	hsa-miR-130a-3p	PAR-CLIP	21572407
MIRT544491	hsa-miR-130b-3p	PAR-CLIP	21572407
MIRT544490	hsa-miR-301a-3p	PAR-CLIP	21572407
MIRT544489	hsa-miR-301b-3p	PAR-CLIP	21572407
MIRT544488	hsa-miR-3666	PAR-CLIP	21572407
MIRT544486	hsa-miR-4295	PAR-CLIP	21572407
MIRT544487	hsa-miR-454-3p	PAR-CLIP	21572407
MIRT544485	hsa-miR-1298-3p	PAR-CLIP	21572407
MIRT544484	hsa-miR-204-3p	PAR-CLIP	21572407
MIRT544482	hsa-miR-4646-5p	PAR-CLIP	21572407
MIRT544483	hsa-miR-3192-5p	PAR-CLIP	21572407
MIRT544481	hsa-miR-619-5p	PAR-CLIP	21572407
MIRT544480	hsa-miR-6506-5p	PAR-CLIP	21572407
MIRT223291	hsa-miR-203a-3p	PAR-CLIP	21572407
MIRT544478	hsa-miR-6878-5p	PAR-CLIP	21572407
MIRT544479	hsa-miR-6731-5p	PAR-CLIP	21572407
MIRT544477	hsa-miR-8085	PAR-CLIP	21572407
MIRT544476	hsa-miR-411-5p	PAR-CLIP	21572407
MIRT544475	hsa-miR-4671-3p	PAR-CLIP	21572407
MIRT544474	hsa-miR-4314	PAR-CLIP	21572407
MIRT544473	hsa-miR-30c-1-3p	PAR-CLIP	21572407
MIRT544472	hsa-miR-30c-2-3p	PAR-CLIP	21572407
MIRT544470	hsa-miR-6788-5p	PAR-CLIP	21572407
MIRT544471	hsa-miR-606	PAR-CLIP	21572407
MIRT529266	hsa-miR-5583-3p	PAR-CLIP	22012620
MIRT529265	hsa-miR-889-5p	PAR-CLIP	22012620
MIRT529264	hsa-miR-135a-5p	PAR-CLIP	22012620
MIRT529263	hsa-miR-135b-5p	PAR-CLIP	22012620
MIRT529262	hsa-miR-584-3p	PAR-CLIP	22012620
MIRT529261	hsa-miR-4277	PAR-CLIP	22012620
MIRT529260	hsa-miR-323b-3p	PAR-CLIP	22012620
MIRT529259	hsa-miR-4797-3p	PAR-CLIP	22012620
MIRT529258	hsa-miR-4264	PAR-CLIP	22012620
MIRT529257	hsa-miR-604	PAR-CLIP	22012620
MIRT529256	hsa-miR-6762-3p	PAR-CLIP	22012620
MIRT529255	hsa-miR-124-5p	PAR-CLIP	22012620
MIRT529254	hsa-miR-2117	PAR-CLIP	22012620
MIRT529253	hsa-miR-647	PAR-CLIP	22012620
MIRT529252	hsa-miR-4273	PAR-CLIP	22012620
MIRT529251	hsa-miR-7156-5p	PAR-CLIP	22012620
MIRT223296	hsa-miR-3606-3p	PAR-CLIP	22012620
MIRT223293	hsa-miR-513a-3p	PAR-CLIP	22012620
MIRT223295	hsa-miR-513c-3p	PAR-CLIP	22012620
MIRT529250	hsa-miR-651-3p	PAR-CLIP	22012620
MIRT529249	hsa-miR-4445-3p	PAR-CLIP	22012620
MIRT529248	hsa-miR-548al	PAR-CLIP	22012620
MIRT529247	hsa-miR-3065-5p	PAR-CLIP	22012620
MIRT529246	hsa-miR-5003-5p	PAR-CLIP	22012620
MIRT529245	hsa-miR-196a-3p	PAR-CLIP	22012620
MIRT529244	hsa-miR-7159-5p	PAR-CLIP	22012620
MIRT529243	hsa-miR-505-3p	PAR-CLIP	22012620
MIRT529242	hsa-miR-421	PAR-CLIP	22012620
MIRT529241	hsa-miR-513b-5p	PAR-CLIP	22012620
MIRT223275	hsa-miR-1305	PAR-CLIP	22012620
MIRT529266	hsa-miR-5583-3p	PAR-CLIP	20371350
MIRT529265	hsa-miR-889-5p	PAR-CLIP	20371350
MIRT529264	hsa-miR-135a-5p	PAR-CLIP	20371350
MIRT529263	hsa-miR-135b-5p	PAR-CLIP	20371350
MIRT529262	hsa-miR-584-3p	PAR-CLIP	20371350
MIRT529261	hsa-miR-4277	PAR-CLIP	20371350
MIRT529260	hsa-miR-323b-3p	PAR-CLIP	20371350
MIRT529259	hsa-miR-4797-3p	PAR-CLIP	20371350
MIRT529258	hsa-miR-4264	PAR-CLIP	20371350
MIRT529257	hsa-miR-604	PAR-CLIP	20371350
MIRT529256	hsa-miR-6762-3p	PAR-CLIP	20371350
MIRT529255	hsa-miR-124-5p	PAR-CLIP	20371350
MIRT529254	hsa-miR-2117	PAR-CLIP	20371350
MIRT529253	hsa-miR-647	PAR-CLIP	20371350
MIRT529252	hsa-miR-4273	PAR-CLIP	20371350
MIRT529251	hsa-miR-7156-5p	PAR-CLIP	20371350
MIRT223296	hsa-miR-3606-3p	PAR-CLIP	21572407
MIRT223293	hsa-miR-513a-3p	PAR-CLIP	21572407
MIRT223295	hsa-miR-513c-3p	PAR-CLIP	21572407
MIRT551009	hsa-miR-100-3p	PAR-CLIP	21572407
MIRT529250	hsa-miR-651-3p	PAR-CLIP	21572407
MIRT551008	hsa-miR-4453	PAR-CLIP	21572407
MIRT551007	hsa-miR-4538	PAR-CLIP	21572407
MIRT551006	hsa-miR-410-3p	PAR-CLIP	21572407
MIRT529247	hsa-miR-3065-5p	PAR-CLIP	21572407
MIRT529246	hsa-miR-5003-5p	PAR-CLIP	21572407
MIRT551005	hsa-miR-8060	PAR-CLIP	21572407
MIRT551004	hsa-miR-1252-5p	PAR-CLIP	21572407
MIRT551003	hsa-miR-3622b-5p	PAR-CLIP	21572407
MIRT529244	hsa-miR-7159-5p	PAR-CLIP	21572407
MIRT529243	hsa-miR-505-3p	PAR-CLIP	21572407
MIRT529242	hsa-miR-421	PAR-CLIP	21572407
MIRT529241	hsa-miR-513b-5p	PAR-CLIP	21572407
MIRT551002	hsa-miR-4642	PAR-CLIP	21572407
MIRT223275	hsa-miR-1305	PAR-CLIP	21572407
MIRT223276	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT544493	hsa-miR-1244	PAR-CLIP	21572407
MIRT544492	hsa-miR-130a-3p	PAR-CLIP	21572407
MIRT544491	hsa-miR-130b-3p	PAR-CLIP	21572407
MIRT544490	hsa-miR-301a-3p	PAR-CLIP	21572407
MIRT544489	hsa-miR-301b-3p	PAR-CLIP	21572407
MIRT544488	hsa-miR-3666	PAR-CLIP	21572407
MIRT544486	hsa-miR-4295	PAR-CLIP	21572407
MIRT544487	hsa-miR-454-3p	PAR-CLIP	21572407
MIRT544485	hsa-miR-1298-3p	PAR-CLIP	21572407
MIRT544484	hsa-miR-204-3p	PAR-CLIP	21572407
MIRT544482	hsa-miR-4646-5p	PAR-CLIP	21572407
MIRT544483	hsa-miR-3192-5p	PAR-CLIP	21572407
MIRT544481	hsa-miR-619-5p	PAR-CLIP	21572407
MIRT544480	hsa-miR-6506-5p	PAR-CLIP	21572407
MIRT223291	hsa-miR-203a-3p	PAR-CLIP	21572407
MIRT544478	hsa-miR-6878-5p	PAR-CLIP	21572407
MIRT544479	hsa-miR-6731-5p	PAR-CLIP	21572407
MIRT544477	hsa-miR-8085	PAR-CLIP	21572407
MIRT544476	hsa-miR-411-5p	PAR-CLIP	21572407
MIRT544475	hsa-miR-4671-3p	PAR-CLIP	21572407
MIRT544474	hsa-miR-4314	PAR-CLIP	21572407
MIRT544473	hsa-miR-30c-1-3p	PAR-CLIP	21572407
MIRT544472	hsa-miR-30c-2-3p	PAR-CLIP	21572407
MIRT544470	hsa-miR-6788-5p	PAR-CLIP	21572407
MIRT544471	hsa-miR-606	PAR-CLIP	21572407
MIRT529266	hsa-miR-5583-3p	PAR-CLIP	22012620
MIRT529265	hsa-miR-889-5p	PAR-CLIP	22012620
MIRT529264	hsa-miR-135a-5p	PAR-CLIP	22012620
MIRT529263	hsa-miR-135b-5p	PAR-CLIP	22012620
MIRT529262	hsa-miR-584-3p	PAR-CLIP	22012620
MIRT529261	hsa-miR-4277	PAR-CLIP	22012620
MIRT529260	hsa-miR-323b-3p	PAR-CLIP	22012620
MIRT529259	hsa-miR-4797-3p	PAR-CLIP	22012620
MIRT529258	hsa-miR-4264	PAR-CLIP	22012620
MIRT529257	hsa-miR-604	PAR-CLIP	22012620
MIRT529256	hsa-miR-6762-3p	PAR-CLIP	22012620
MIRT529255	hsa-miR-124-5p	PAR-CLIP	22012620
MIRT529254	hsa-miR-2117	PAR-CLIP	22012620
MIRT529253	hsa-miR-647	PAR-CLIP	22012620
MIRT529252	hsa-miR-4273	PAR-CLIP	22012620
MIRT529251	hsa-miR-7156-5p	PAR-CLIP	22012620
MIRT223296	hsa-miR-3606-3p	PAR-CLIP	22012620
MIRT223293	hsa-miR-513a-3p	PAR-CLIP	22012620
MIRT223295	hsa-miR-513c-3p	PAR-CLIP	22012620
MIRT529250	hsa-miR-651-3p	PAR-CLIP	22012620
MIRT529249	hsa-miR-4445-3p	PAR-CLIP	22012620
MIRT529248	hsa-miR-548al	PAR-CLIP	22012620
MIRT529247	hsa-miR-3065-5p	PAR-CLIP	22012620
MIRT529246	hsa-miR-5003-5p	PAR-CLIP	22012620
MIRT529245	hsa-miR-196a-3p	PAR-CLIP	22012620
MIRT529244	hsa-miR-7159-5p	PAR-CLIP	22012620
MIRT529243	hsa-miR-505-3p	PAR-CLIP	22012620
MIRT529242	hsa-miR-421	PAR-CLIP	22012620
MIRT529241	hsa-miR-513b-5p	PAR-CLIP	22012620
MIRT223275	hsa-miR-1305	PAR-CLIP	22012620
MIRT1454758	hsa-miR-103a	CLIP-seq
MIRT1454759	hsa-miR-107	CLIP-seq
MIRT1454760	hsa-miR-1243	CLIP-seq
MIRT1454761	hsa-miR-1261	CLIP-seq
MIRT1454762	hsa-miR-1283	CLIP-seq
MIRT1454763	hsa-miR-129-5p	CLIP-seq
MIRT1454764	hsa-miR-1301	CLIP-seq
MIRT1454765	hsa-miR-130a	CLIP-seq
MIRT1454766	hsa-miR-130b	CLIP-seq
MIRT1454767	hsa-miR-151-3p	CLIP-seq
MIRT1454768	hsa-miR-1915	CLIP-seq
MIRT1454769	hsa-miR-203	CLIP-seq
MIRT1454770	hsa-miR-298	CLIP-seq
MIRT1454771	hsa-miR-301a	CLIP-seq
MIRT1454772	hsa-miR-301b	CLIP-seq
MIRT1454773	hsa-miR-3161	CLIP-seq
MIRT1454774	hsa-miR-3179	CLIP-seq
MIRT1454775	hsa-miR-338-5p	CLIP-seq
MIRT1454776	hsa-miR-3616-3p	CLIP-seq
MIRT1454777	hsa-miR-3617	CLIP-seq
MIRT1454778	hsa-miR-3619-3p	CLIP-seq
MIRT1454779	hsa-miR-365	CLIP-seq
MIRT1454780	hsa-miR-3657	CLIP-seq
MIRT1454781	hsa-miR-3976	CLIP-seq
MIRT1454782	hsa-miR-411	CLIP-seq
MIRT1454783	hsa-miR-4317	CLIP-seq
MIRT1454784	hsa-miR-4425	CLIP-seq
MIRT1454785	hsa-miR-4426	CLIP-seq
MIRT1454786	hsa-miR-4436b-3p	CLIP-seq
MIRT1454787	hsa-miR-4463	CLIP-seq
MIRT1454788	hsa-miR-4499	CLIP-seq
MIRT1454789	hsa-miR-450b-5p	CLIP-seq
MIRT1454790	hsa-miR-454	CLIP-seq
MIRT1454791	hsa-miR-4641	CLIP-seq
MIRT1454792	hsa-miR-4643	CLIP-seq
MIRT1454793	hsa-miR-4647	CLIP-seq
MIRT1454794	hsa-miR-466	CLIP-seq
MIRT1454795	hsa-miR-4662b	CLIP-seq
MIRT1454796	hsa-miR-4669	CLIP-seq
MIRT1454797	hsa-miR-4672	CLIP-seq
MIRT1454798	hsa-miR-4709-5p	CLIP-seq
MIRT1454799	hsa-miR-4714-3p	CLIP-seq
MIRT1454800	hsa-miR-4721	CLIP-seq
MIRT1454801	hsa-miR-4764-5p	CLIP-seq
MIRT1454802	hsa-miR-4775	CLIP-seq
MIRT1454803	hsa-miR-4776-5p	CLIP-seq
MIRT1454804	hsa-miR-4789-3p	CLIP-seq
MIRT1454805	hsa-miR-4802-3p	CLIP-seq
MIRT1454806	hsa-miR-5047	CLIP-seq
MIRT1454807	hsa-miR-507	CLIP-seq
MIRT1454808	hsa-miR-513b	CLIP-seq
MIRT1454809	hsa-miR-520d-5p	CLIP-seq
MIRT1454810	hsa-miR-524-5p	CLIP-seq
MIRT1454811	hsa-miR-548p	CLIP-seq
MIRT1454812	hsa-miR-557	CLIP-seq
MIRT1454813	hsa-miR-584	CLIP-seq
MIRT1454814	hsa-miR-590-3p	CLIP-seq
MIRT1454815	hsa-miR-600	CLIP-seq
MIRT1454816	hsa-miR-633	CLIP-seq
MIRT1454817	hsa-miR-641	CLIP-seq
MIRT1454818	hsa-miR-665	CLIP-seq
MIRT1454819	hsa-miR-936	CLIP-seq
MIRT1454758	hsa-miR-103a	CLIP-seq
MIRT1454759	hsa-miR-107	CLIP-seq
MIRT1454764	hsa-miR-1301	CLIP-seq
MIRT1454820	hsa-miR-186	CLIP-seq
MIRT1454821	hsa-miR-1911	CLIP-seq
MIRT1454822	hsa-miR-3133	CLIP-seq
MIRT1454823	hsa-miR-3163	CLIP-seq
MIRT1454774	hsa-miR-3179	CLIP-seq
MIRT1454824	hsa-miR-34b	CLIP-seq
MIRT1454825	hsa-miR-3613-3p	CLIP-seq
MIRT1454777	hsa-miR-3617	CLIP-seq
MIRT1454779	hsa-miR-365	CLIP-seq
MIRT1454781	hsa-miR-3976	CLIP-seq
MIRT1454783	hsa-miR-4317	CLIP-seq
MIRT1454786	hsa-miR-4436b-3p	CLIP-seq
MIRT1454826	hsa-miR-4517	CLIP-seq
MIRT1454791	hsa-miR-4641	CLIP-seq
MIRT1454827	hsa-miR-4668-3p	CLIP-seq
MIRT1454798	hsa-miR-4709-5p	CLIP-seq
MIRT1454799	hsa-miR-4714-3p	CLIP-seq
MIRT1454828	hsa-miR-4789-5p	CLIP-seq
MIRT1454805	hsa-miR-4802-3p	CLIP-seq
MIRT1454806	hsa-miR-5047	CLIP-seq
MIRT1454808	hsa-miR-513b	CLIP-seq
MIRT1454811	hsa-miR-548p	CLIP-seq
MIRT1454829	hsa-miR-570	CLIP-seq
MIRT1454817	hsa-miR-641	CLIP-seq
MIRT1454830	hsa-miR-660	CLIP-seq
MIRT1454831	hsa-miR-664	CLIP-seq
MIRT1454818	hsa-miR-665	CLIP-seq
MIRT1454819	hsa-miR-936	CLIP-seq
MIRT1454758	hsa-miR-103a	CLIP-seq
MIRT1454759	hsa-miR-107	CLIP-seq
MIRT2136228	hsa-miR-1193	CLIP-seq
MIRT2136229	hsa-miR-1200	CLIP-seq
MIRT1454764	hsa-miR-1301	CLIP-seq
MIRT1454767	hsa-miR-151-3p	CLIP-seq
MIRT2136230	hsa-miR-1976	CLIP-seq
MIRT2136231	hsa-miR-198	CLIP-seq
MIRT2136232	hsa-miR-2278	CLIP-seq
MIRT1454770	hsa-miR-298	CLIP-seq
MIRT2136233	hsa-miR-3064-3p	CLIP-seq
MIRT2136234	hsa-miR-3132	CLIP-seq
MIRT2136235	hsa-miR-3154	CLIP-seq
MIRT1454773	hsa-miR-3161	CLIP-seq
MIRT2136236	hsa-miR-3529	CLIP-seq
MIRT1454777	hsa-miR-3617	CLIP-seq
MIRT1454779	hsa-miR-365	CLIP-seq
MIRT2136237	hsa-miR-379	CLIP-seq
MIRT2136238	hsa-miR-3915	CLIP-seq
MIRT2136239	hsa-miR-3928	CLIP-seq
MIRT1454783	hsa-miR-4317	CLIP-seq
MIRT2136240	hsa-miR-4324	CLIP-seq
MIRT1454787	hsa-miR-4463	CLIP-seq
MIRT2136241	hsa-miR-4468	CLIP-seq
MIRT2136242	hsa-miR-4487	CLIP-seq
MIRT1454788	hsa-miR-4499	CLIP-seq
MIRT2136243	hsa-miR-4534	CLIP-seq
MIRT2136244	hsa-miR-4633-3p	CLIP-seq
MIRT1454791	hsa-miR-4641	CLIP-seq
MIRT1454797	hsa-miR-4672	CLIP-seq
MIRT1454798	hsa-miR-4709-5p	CLIP-seq
MIRT1454799	hsa-miR-4714-3p	CLIP-seq
MIRT1454828	hsa-miR-4789-5p	CLIP-seq
MIRT1454805	hsa-miR-4802-3p	CLIP-seq
MIRT2136245	hsa-miR-490-5p	CLIP-seq
MIRT1454806	hsa-miR-5047	CLIP-seq
MIRT2136246	hsa-miR-511	CLIP-seq
MIRT1454808	hsa-miR-513b	CLIP-seq
MIRT2136247	hsa-miR-518d-5p	CLIP-seq
MIRT2136248	hsa-miR-519b-5p	CLIP-seq
MIRT2136249	hsa-miR-519c-5p	CLIP-seq
MIRT2136250	hsa-miR-520c-5p	CLIP-seq
MIRT2136251	hsa-miR-526a	CLIP-seq
MIRT2136252	hsa-miR-544b	CLIP-seq
MIRT1454811	hsa-miR-548p	CLIP-seq
MIRT1454813	hsa-miR-584	CLIP-seq
MIRT2136253	hsa-miR-610	CLIP-seq
MIRT1454816	hsa-miR-633	CLIP-seq
MIRT1454817	hsa-miR-641	CLIP-seq
MIRT2136254	hsa-miR-654-3p	CLIP-seq
MIRT1454819	hsa-miR-936	CLIP-seq
MIRT1454758	hsa-miR-103a	CLIP-seq
MIRT1454759	hsa-miR-107	CLIP-seq
MIRT1454764	hsa-miR-1301	CLIP-seq
MIRT1454820	hsa-miR-186	CLIP-seq
MIRT1454773	hsa-miR-3161	CLIP-seq
MIRT1454777	hsa-miR-3617	CLIP-seq
MIRT1454779	hsa-miR-365	CLIP-seq
MIRT1454783	hsa-miR-4317	CLIP-seq
MIRT1454791	hsa-miR-4641	CLIP-seq
MIRT1454792	hsa-miR-4643	CLIP-seq
MIRT1454797	hsa-miR-4672	CLIP-seq
MIRT1454798	hsa-miR-4709-5p	CLIP-seq
MIRT1454799	hsa-miR-4714-3p	CLIP-seq
MIRT2357229	hsa-miR-4717-3p	CLIP-seq
MIRT1454828	hsa-miR-4789-5p	CLIP-seq
MIRT1454805	hsa-miR-4802-3p	CLIP-seq
MIRT2357230	hsa-miR-499-3p	CLIP-seq
MIRT2357231	hsa-miR-499a-3p	CLIP-seq
MIRT1454806	hsa-miR-5047	CLIP-seq
MIRT1454808	hsa-miR-513b	CLIP-seq
MIRT2357232	hsa-miR-548aa	CLIP-seq
MIRT1454811	hsa-miR-548p	CLIP-seq
MIRT1454816	hsa-miR-633	CLIP-seq
MIRT1454817	hsa-miR-641	CLIP-seq
MIRT1454831	hsa-miR-664	CLIP-seq
MIRT1454758	hsa-miR-103a	CLIP-seq
MIRT1454759	hsa-miR-107	CLIP-seq
MIRT1454764	hsa-miR-1301	CLIP-seq
MIRT1454777	hsa-miR-3617	CLIP-seq
MIRT1454828	hsa-miR-4789-5p	CLIP-seq
MIRT1454805	hsa-miR-4802-3p	CLIP-seq
MIRT1454806	hsa-miR-5047	CLIP-seq
MIRT1454808	hsa-miR-513b	CLIP-seq
MIRT1454811	hsa-miR-548p	CLIP-seq
MIRT1454817	hsa-miR-641	CLIP-seq
MIRT1454777	hsa-miR-3617	CLIP-seq
MIRT1454792	hsa-miR-4643	CLIP-seq
MIRT1454828	hsa-miR-4789-5p	CLIP-seq
MIRT1454805	hsa-miR-4802-3p	CLIP-seq
MIRT2357230	hsa-miR-499-3p	CLIP-seq
MIRT2357231	hsa-miR-499a-3p	CLIP-seq
MIRT1454808	hsa-miR-513b	CLIP-seq
MIRT2357232	hsa-miR-548aa	CLIP-seq
MIRT1454811	hsa-miR-548p	CLIP-seq
MIRT1454817	hsa-miR-641	CLIP-seq
MIRT1454792	hsa-miR-4643	CLIP-seq
MIRT2357230	hsa-miR-499-3p	CLIP-seq
MIRT2357231	hsa-miR-499a-3p	CLIP-seq
MIRT2357232	hsa-miR-548aa	CLIP-seq
MIRT2136229	hsa-miR-1200	CLIP-seq
MIRT1454765	hsa-miR-130a	CLIP-seq
MIRT1454766	hsa-miR-130b	CLIP-seq
MIRT2650892	hsa-miR-1323	CLIP-seq
MIRT2650893	hsa-miR-141	CLIP-seq
MIRT2650894	hsa-miR-144	CLIP-seq
MIRT1454767	hsa-miR-151-3p	CLIP-seq
MIRT2136230	hsa-miR-1976	CLIP-seq
MIRT2136231	hsa-miR-198	CLIP-seq
MIRT2650895	hsa-miR-200a	CLIP-seq
MIRT2650896	hsa-miR-204	CLIP-seq
MIRT2650897	hsa-miR-211	CLIP-seq
MIRT2136232	hsa-miR-2278	CLIP-seq
MIRT1454770	hsa-miR-298	CLIP-seq
MIRT1454771	hsa-miR-301a	CLIP-seq
MIRT1454772	hsa-miR-301b	CLIP-seq
MIRT2136233	hsa-miR-3064-3p	CLIP-seq
MIRT2136234	hsa-miR-3132	CLIP-seq
MIRT2136235	hsa-miR-3154	CLIP-seq
MIRT1454773	hsa-miR-3161	CLIP-seq
MIRT1454823	hsa-miR-3163	CLIP-seq
MIRT2136236	hsa-miR-3529	CLIP-seq
MIRT2650898	hsa-miR-3591-5p	CLIP-seq
MIRT2650899	hsa-miR-377	CLIP-seq
MIRT2136237	hsa-miR-379	CLIP-seq
MIRT2136238	hsa-miR-3915	CLIP-seq
MIRT2136239	hsa-miR-3928	CLIP-seq
MIRT2136240	hsa-miR-4324	CLIP-seq
MIRT1454787	hsa-miR-4463	CLIP-seq
MIRT2136241	hsa-miR-4468	CLIP-seq
MIRT2650900	hsa-miR-4473	CLIP-seq
MIRT1454788	hsa-miR-4499	CLIP-seq
MIRT1454790	hsa-miR-454	CLIP-seq
MIRT1454792	hsa-miR-4643	CLIP-seq
MIRT1454797	hsa-miR-4672	CLIP-seq
MIRT2650901	hsa-miR-4734	CLIP-seq
MIRT1454828	hsa-miR-4789-5p	CLIP-seq
MIRT2650902	hsa-miR-495	CLIP-seq
MIRT2357230	hsa-miR-499-3p	CLIP-seq
MIRT2357231	hsa-miR-499a-3p	CLIP-seq
MIRT2136247	hsa-miR-518d-5p	CLIP-seq
MIRT2136248	hsa-miR-519b-5p	CLIP-seq
MIRT2136249	hsa-miR-519c-5p	CLIP-seq
MIRT2136250	hsa-miR-520c-5p	CLIP-seq
MIRT2136251	hsa-miR-526a	CLIP-seq
MIRT2136252	hsa-miR-544b	CLIP-seq
MIRT2650903	hsa-miR-548a-5p	CLIP-seq
MIRT2357232	hsa-miR-548aa	CLIP-seq
MIRT2650904	hsa-miR-548ab	CLIP-seq
MIRT2650905	hsa-miR-548ak	CLIP-seq
MIRT2650906	hsa-miR-548b-5p	CLIP-seq
MIRT2650907	hsa-miR-548c-5p	CLIP-seq
MIRT2650908	hsa-miR-548d-5p	CLIP-seq
MIRT2650909	hsa-miR-548h	CLIP-seq
MIRT2650910	hsa-miR-548i	CLIP-seq
MIRT2650911	hsa-miR-548j	CLIP-seq
MIRT2650912	hsa-miR-548n	CLIP-seq
MIRT2650913	hsa-miR-548o	CLIP-seq
MIRT2650914	hsa-miR-548w	CLIP-seq
MIRT2650915	hsa-miR-548y	CLIP-seq
MIRT2650916	hsa-miR-559	CLIP-seq
MIRT1454816	hsa-miR-633	CLIP-seq
MIRT2650917	hsa-miR-802	CLIP-seq
MIRT2136229	hsa-miR-1200	CLIP-seq
MIRT2650893	hsa-miR-141	CLIP-seq
MIRT2136230	hsa-miR-1976	CLIP-seq
MIRT2136231	hsa-miR-198	CLIP-seq
MIRT2650895	hsa-miR-200a	CLIP-seq
MIRT2136232	hsa-miR-2278	CLIP-seq
MIRT1454770	hsa-miR-298	CLIP-seq
MIRT2136233	hsa-miR-3064-3p	CLIP-seq
MIRT2136234	hsa-miR-3132	CLIP-seq
MIRT2136235	hsa-miR-3154	CLIP-seq
MIRT1454773	hsa-miR-3161	CLIP-seq
MIRT1454776	hsa-miR-3616-3p	CLIP-seq
MIRT2136240	hsa-miR-4324	CLIP-seq
MIRT1454786	hsa-miR-4436b-3p	CLIP-seq
MIRT2136241	hsa-miR-4468	CLIP-seq
MIRT1454792	hsa-miR-4643	CLIP-seq
MIRT1454797	hsa-miR-4672	CLIP-seq
MIRT1454800	hsa-miR-4721	CLIP-seq
MIRT1454828	hsa-miR-4789-5p	CLIP-seq
MIRT2357230	hsa-miR-499-3p	CLIP-seq
MIRT2357231	hsa-miR-499a-3p	CLIP-seq
MIRT2136247	hsa-miR-518d-5p	CLIP-seq
MIRT2136248	hsa-miR-519b-5p	CLIP-seq
MIRT2136249	hsa-miR-519c-5p	CLIP-seq
MIRT2136250	hsa-miR-520c-5p	CLIP-seq
MIRT2136251	hsa-miR-526a	CLIP-seq
MIRT2136252	hsa-miR-544b	CLIP-seq
MIRT2357232	hsa-miR-548aa	CLIP-seq
MIRT1454816	hsa-miR-633	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0002376	Process	Immune system process	IEA
GO:0004842	Function	Ubiquitin-protein transferase activity	EXP	17392790, 19017631, 19484123
GO:0005737	Component	Cytoplasm	IBA
GO:0005737	Component	Cytoplasm	IDA	11331580, 17156811
GO:0005737	Component	Cytoplasm	IEA
GO:0005829	Component	Cytosol	IBA
GO:0005829	Component	Cytosol	IDA
GO:0005829	Component	Cytosol	TAS
GO:0005886	Component	Plasma membrane	IDA
GO:0008270	Function	Zinc ion binding	IEA
GO:0010468	Process	Regulation of gene expression	IBA
GO:0016567	Process	Protein ubiquitination	IEA
GO:0016740	Function	Transferase activity	IEA
GO:0042802	Function	Identical protein binding	IPI	17156811
GO:0045087	Process	Innate immune response	IBA
GO:0045087	Process	Innate immune response	IEA
GO:0045087	Process	Innate immune response	TAS
GO:0046872	Function	Metal ion binding	IEA
GO:0061630	Function	Ubiquitin protein ligase activity	IBA
GO:0061630	Function	Ubiquitin protein ligase activity	IEA

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q9C037
• Protein name: E3 ubiquitin-protein ligase TRIM4 (EC 2.3.2.27) (RING finger protein 87) (RING-type E3 ubiquitin transferase TRIM4) (Tripartite motif-containing protein 4)
• Protein function: E3 ubiquitin-protein ligase. Mediates 'Lys-63'-linked polyubiquitination of the innate immune receptor RIGI, this linkage doesn't lead to proteasomal degradation but seems to enhance IFN induction.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF15227	zf-C3HC4_4	12 → 52		Domain
  PF00643	zf-B_box	82 → 123	B-box zinc finger	Domain
  PF00622	SPRY	379 → 495	SPRY domain	Family

• Sequence:

  MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAA
  LRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQTHAM
  APIDEAFESYRTGNFDIHVDEWKRRLIRLLLYHFKQEEKLLKSQRNLVAKMKKVMHLQDV
  EVKNATQWKDKIKSQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLN
  QTIASLKKLILEVGEKSQAPTLELLQNPKEVLTRSEIQDVNYSLEAVKVKTVCQIPLMKE
  MLKRFQVAVNLAEDTAHPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFV
  ERFQHLPCVLGKNVFTSGKHYWEVESRDSLEVAVGVCREDVMGITDRSKMSPDVGIWAIY
  WSAAGYWPLIGFPGTPTQQEPALHRVGVYLDRGTGNVSFYSAVDGVHLHTFSCSSVSRLR
  PFFWLSPLASLVIPPVTDRK

• Sequence length: 500

Pathways

Reactome:

Antigen processing: Ubiquitination & Proteasome degradation

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
COLORECTAL CANCER	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Breast Neoplasms	Breast neoplasm	Pubtator	35843886	Associate	★☆☆☆☆ Found in Text Mining only
Carcinoma Hepatocellular	Hepatocellular carcinoma	Pubtator	32685988	Associate	★☆☆☆☆ Found in Text Mining only
Carcinoma Renal Cell	Renal cell carcinoma	Pubtator	35617983	Associate	★☆☆☆☆ Found in Text Mining only
Colorectal Neoplasms	Colorectal neoplasm	Pubtator	30820706	Associate	★☆☆☆☆ Found in Text Mining only
Fatty Liver Alcoholic	Fatty liver, alcoholic	Pubtator	32685988	Associate	★☆☆☆☆ Found in Text Mining only
Neural Tube Defects	Neural Tube Defect	BEFREE	30709423		★☆☆☆☆ Found in Text Mining only
Neural Tube Defects	Neural tube defect	Pubtator	30709423	Associate	★☆☆☆☆ Found in Text Mining only
Non-Small Cell Lung Carcinoma	Lung carcinoma	BEFREE	26599082		★☆☆☆☆ Found in Text Mining only