Gene Gene information from NCBI Gene database.
Entrez ID 8777
Gene name Multiple PDZ domain crumbs cell polarity complex component
Gene symbol MPDZ
Synonyms (NCBI Gene)
HYC2MUPP1
Chromosome 9
Chromosome location 9p23
Summary The protein encoded by this gene has multiple PDZ domains, which are hallmarks of protein-protein interactions. The encoded protein is known to interact with the HTR2C receptor and may cause it to clump at the cell surface. Multiple transcript variants en
SNPs SNP information provided by dbSNP.
16
SNP ID Visualize variation Clinical significance Consequence
rs188840960 A>C Conflicting-interpretations-of-pathogenicity Missense variant, coding sequence variant, non coding transcript variant, genic downstream transcript variant
rs368581522 G>A Likely-pathogenic Missense variant, non coding transcript variant, coding sequence variant
rs372127610 G>A Pathogenic Stop gained, non coding transcript variant, coding sequence variant
rs376078512 G>A Pathogenic Stop gained, non coding transcript variant, coding sequence variant
rs777752091 G>A Likely-pathogenic Coding sequence variant, non coding transcript variant, stop gained, genic downstream transcript variant
miRNA miRNA information provided by mirtarbase database.
241
miRTarBase ID miRNA Experiments Reference
MIRT018749 hsa-miR-335-5p Microarray 18185580
MIRT030077 hsa-miR-26b-5p Microarray 19088304
MIRT1155936 hsa-let-7a CLIP-seq
MIRT1155937 hsa-let-7b CLIP-seq
MIRT1155938 hsa-let-7c CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
18
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 11802782, 15364909, 19071123, 19909339, 22653443
GO:0005737 Component Cytoplasm IBA
GO:0005737 Component Cytoplasm IDA 15364909
GO:0005886 Component Plasma membrane IBA
GO:0005886 Component Plasma membrane IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
603785 7208 ENSG00000107186
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O75970
Protein name Multiple PDZ domain protein (Multi-PDZ domain protein 1)
Protein function Member of the NMDAR signaling complex that may play a role in control of AMPAR potentiation and synaptic plasticity in excitatory synapses (PubMed:11150294, PubMed:15312654). Promotes clustering of HT2RC at the cell surface (By similarity). {ECO
PDB 2FCF , 2FNE , 2IWN , 2IWO , 2IWP , 2IWQ , 2O2T , 2OPG , 2QG1
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF09045 L27_2 6 63 L27_2 Domain
PF00595 PDZ 137 221 PDZ domain Domain
PF00595 PDZ 257 334 PDZ domain Domain
PF00595 PDZ 376 460 PDZ domain Domain
PF00595 PDZ 554 630 PDZ domain Domain
PF00595 PDZ 700 784 PDZ domain Domain
PF00595 PDZ 1008 1080 PDZ domain Domain
PF00595 PDZ 1151 1240 PDZ domain Domain
PF00595 PDZ 1350 1429 PDZ domain Domain
PF00595 PDZ 1482 1561 PDZ domain Domain
PF16667 MPDZ_u10 1562 1626 Unstructured region 10 on multiple PDZ protein Disordered
PF00595 PDZ 1627 1709 PDZ domain Domain
PF00595 PDZ 1725 1804 PDZ domain Domain
PF00595 PDZ 1862 1945 PDZ domain Domain
PF00595 PDZ 1987 2069 PDZ domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in heart, brain, placenta, liver, skeletal muscle, kidney and pancreas. {ECO:0000269|PubMed:9537516}.
Sequence
MLEAIDKNRALHAAERLQTKLRERGDVANEDKLSLLKSVLQSPLFSQILSLQTSVQQLKD
QVN
IATSATSNIEYAHVPHLSPAVIPTLQNESFLLSPNNGNLEALTGPGIPHINGKPACD
EFDQLIKNMAQGRHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDG
RLKETDQILAINGQALDQTITHQQAISILQKAKDTVQLVIA
RGSLPQLVSPIVSRSPSAA
STISAHSNPVHWQHMETIELVNDGSGLGFGIIGGKATGVIVKTILPGGVADQHGRLCSGD
HILKIGDTDLAGMSSEQVAQVLRQCGNRVKLMIA
RGAIEERTAPTALGITLSSSPTSTPE
LRVDASTQKGEESETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDG
RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM
RRGMKQEAELMSREDVTKDA
DLSPVNASIIKENYEKDEDFLSSTRNTNILPTEEEGYPLLSAEIEEIEDAQKQEAALLTK
WQRIMGINYEIVVAHVSKFSENSGLGISLEATVGHHFIRSVLPEGPVGHSGKLFSGDELL
EVNGITLLGENHQDVVNILKELPIEVTMVC
CRRTVPPTTQSELDSLDLCDIELTEKPHVD
LGEFIGSSETEDPVLAMTDAGQSTEEVQAPLAMWEAGIQHIELEKGSKGLGFSILDYQDP
IDPASTVIIIRSLVPGGIAEKDGRLLPGDRLMFVNDVNLENSSLEEAVEALKGAPSGTVR
IGVA
KPLPLSPEEGYVSAKEDSFLYPPHSCEEAGLADKPLFRADLALVGTNDADLVDEST
FESPYSPENDSIYSTQASILSLHGSSCGDGLNYGSSLPSSPPKDVIENSCDPVLDLHMSL
EELYTQNLLQRQDENTPSVDISMGPASGFTINDYTPANAIEQQYECENTIVWTESHLPSE
VISSAELPSVLPDSAGKGSEYLLEQSSLACNAECVMLQNVSKESFERTINIAKGNSSLGM
TVSANKDGLGMIVRSIIHGGAISRDGRIAIGDCILSINEESTISVTNAQARAMLRRHSLI

GPDIKITYVPAEHLEEFKISLGQQSGRVMALDIFSSYTGRDIPELPEREEGEGEESELQN
TAYSNWNQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNG
TLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQ
SIINRPRKSPLPSLLHNLYP
KYNFSSTNPFADSLQINADKAPSQSESEPEKAPLCSVPPPPPSAFAEMGSDHTQSSASKI
SQDVDKEDEFGYSWKNIRERYGTLTGELHMIELEKGHSGLGLSLAGNKDRSRMSVFIVGI
DPNGAAGKDGRLQIADELLEINGQILYGRSHQNASSIIKCAPSKVKIIF
IRNKDAVNQMA
VCPGNAVEPLPSNSENLQNKETEPTVTTSDAAVDLSSFKNVQHLELPKDQGGLGIAISEE
DTLSGVIIKSLTEHGVAATDGRLKVGDQILAVDDEIVVGYPIEKFISLLKTAKMTVKLTI
H
AENPDSQAVPSAAGAASGEKKNSSQSLMVPQSGSPEPESIRNTSRSSTPAIFASDPATC
PIIPGC
ETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEV
NGIDLRKATHDEAINVLRQTPQRVRLTLY
RDEAPYKEEEVCDTLTIELQKKPGKGLGLSI
VGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVT
LEVG
RIKAGPFHSERRPSQSSQVSEGSLSSFTFPLSGSSTSESLESSSKKNALASEIQGL
RTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTS
TEGMTHTQAVNLLKNASGSIEMQVV
AGGDVSVVTGHQQEPASSSLSFTGLTSSSIFQDDL
GPPQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAV
NGQSLEGVTHEEAVAILKRTKGTVTLMVL
S
Sequence length 2070
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG 
  Tight junction  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
24
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Hydrocephalus, nonsyndromic, autosomal recessive 2 Pathogenic; Likely pathogenic rs2131610068, rs1950043713, rs775394111, rs2135678282, rs571799365, rs1267168609, rs2131668162, rs770258839, rs751161649, rs2495861105, rs2497668341, rs746360632, rs797045095, rs797045707, rs1161458067
View all (12 more)
RCV001644991
RCV001331120
RCV005635444
RCV001780300
RCV002221632
View all (22 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
MPDZ-related disorder Likely pathogenic; Pathogenic rs775394111, rs2135678282, rs200955619, rs755276577, rs747068627 RCV003426291
RCV004731141
RCV003401914
RCV003898843
RCV003396804
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ALZHEIMER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANDROGENETIC ALOPECIA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTISM SPECTRUM DISORDER CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTISM SPECTRUM DISORDERS Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations