Gene Gene information from NCBI Gene database.
Entrez ID 84062
Gene name Dystrobrevin binding protein 1
Gene symbol DTNBP1
Synonyms (NCBI Gene)
BLOC1S8DBNDHPS7My031SDY
Chromosome 6
Chromosome location 6p22.3
Summary This gene encodes a protein that may play a role in organelle biogenesis associated with melanosomes, platelet dense granules, and lysosomes. A similar protein in mouse is a component of a protein complex termed biogenesis of lysosome-related organelles c
SNPs SNP information provided by dbSNP.
3
SNP ID Visualize variation Clinical significance Consequence
rs104893945 G>A Pathogenic Genic upstream transcript variant, coding sequence variant, stop gained, non coding transcript variant
rs727502866 C>T Pathogenic 5 prime UTR variant, coding sequence variant, non coding transcript variant, genic upstream transcript variant, stop gained
rs752074481 CTCT>-,CT Pathogenic, uncertain-significance Frameshift variant, coding sequence variant, genic downstream transcript variant
miRNA miRNA information provided by mirtarbase database.
28
miRTarBase ID miRNA Experiments Reference
MIRT946763 hsa-miR-1229 CLIP-seq
MIRT946764 hsa-miR-342-3p CLIP-seq
MIRT946765 hsa-miR-377 CLIP-seq
MIRT946766 hsa-miR-1207-5p CLIP-seq
MIRT946767 hsa-miR-135a CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
83
GO ID Ontology Definition Evidence Reference
GO:0001822 Process Kidney development IEA
GO:0001956 Process Positive regulation of neurotransmitter secretion IEA
GO:0001956 Process Positive regulation of neurotransmitter secretion ISS
GO:0002092 Process Positive regulation of receptor internalization IEA
GO:0005515 Function Protein binding IPI 15102850, 17043677, 19142223, 19349376, 20921223, 22203680, 23414517, 25416956, 32296183, 33961781
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
607145 17328 ENSG00000047579
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q96EV8
Protein name Dysbindin (Biogenesis of lysosome-related organelles complex 1 subunit 8) (BLOC-1 subunit 8) (Dysbindin-1) (Dystrobrevin-binding protein 1) (Hermansky-Pudlak syndrome 7 protein) (HPS7 protein)
Protein function Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target m
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04440 Dysbindin 175 320 Dysbindin (Dystrobrevin binding protein 1) Family
Tissue specificity TISSUE SPECIFICITY: Detected in brain, in neurons and in neuropil. Isoform 1 is expressed in the cerebral cortex, and hippocampal frontal (HF). Specific expression in the posterior half of the superior temporal gyrus (pSTG). Higher expression of isoform 2
Sequence
MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWA
ALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTH
LEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQK
VLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQ
MDLMDISDQEALDVFLNSGGEENTVLSPALGPESSTCQNEITLQVPNPSELRAKPPSSSS
TCTDSATRDISEGGESPVVQ
SDEEEVQVDTALATSHTDREATPDGGEDSDS
Sequence length 351
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Golgi Associated Vesicle Biogenesis
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
38
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
DTNBP1-related disorder Likely pathogenic; Pathogenic rs367702294, rs1772009067 RCV003420788
RCV003418821
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Hermansky-Pudlak syndrome Likely pathogenic; Pathogenic rs746781620 RCV002282931
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Hermansky-Pudlak syndrome 7 Likely pathogenic; Pathogenic rs757126788, rs2127784434, rs727502866, rs104893945 RCV005045112
RCV002272733
RCV000150041
RCV000003601
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BASAL CELL CARCINOMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BIPOLAR DISORDER Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Likely benign; - ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Affective Disorders, Psychotic Affective Psychosis BEFREE 25530342
★☆☆☆☆
Found in Text Mining only
Albinism Albinism Pubtator 35488210 Associate
★☆☆☆☆
Found in Text Mining only
Albinism Albinism HPO_DG
★☆☆☆☆
Found in Text Mining only
Albinism Oculocutaneous Oculocutaneous albinism Pubtator 28259707 Inhibit
★☆☆☆☆
Found in Text Mining only
Albinism with hemorrhagic diathesis and pigmented reticuloendothelial cells Albinism With Hemorrhagic Diathesis And Pigmented Reticuloendothelial Cells CLINVAR_DG
★☆☆☆☆
Found in Text Mining only
Albinism, Ocular Ocular albinism HPO_DG
★☆☆☆☆
Found in Text Mining only
Albinism, Oculocutaneous Oculocutaneous albinism BEFREE 28259707
★☆☆☆☆
Found in Text Mining only
ANOPHTHALMIA AND PULMONARY HYPOPLASIA Syndromic microphthalmia BEFREE 29040676
★☆☆☆☆
Found in Text Mining only
Anxiety Anxiety Disorder BEFREE 18797396, 19729970, 20615259, 30967545, 31556815
★☆☆☆☆
Found in Text Mining only
Anxiety Disorders Anxiety Disorder BEFREE 18797396, 19729970, 20615259, 30967545, 31556815
★☆☆☆☆
Found in Text Mining only