SPATA9 (spermatogenesis associated 9)

Gene Gene information from NCBI Gene database.
Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID 83890
Gene name Spermatogenesis associated 9
Gene symbol SPATA9
Synonyms (NCBI Gene)
NYD-SP16
Chromosome 5
Chromosome location 5q15
miRNA miRNA information provided by mirtarbase database.
7
Gene miRNA Gene ontology Other IDs Protein Associated diseases
Show/Hide all (7)
miRTarBase ID miRNA Experiments Reference
MIRT017900 hsa-miR-335-5p Microarray 18185580
MIRT022601 hsa-miR-124-3p Microarray 18668037
MIRT1382802 hsa-miR-128 CLIP-seq
MIRT1382803 hsa-miR-140-3p CLIP-seq
MIRT1382804 hsa-miR-340 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
6
Gene miRNA Gene ontology Other IDs Protein Associated diseases
Show/Hide all (6)
GO ID Ontology Definition Evidence Reference
GO:0003674 Function Molecular_function ND
GO:0005575 Component Cellular_component ND
GO:0007283 Process Spermatogenesis IEA
GO:0008150 Process Biological_process ND
GO:0016020 Component Membrane IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
Gene miRNA Gene ontology Other IDs Protein Associated diseases
MIM HGNC e!Ensembl
608039 22988 ENSG00000145757
Protein Protein information from UniProt database.
Gene miRNA Gene ontology Other IDs Protein Associated diseases
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9BWV2
Protein name Spermatogenesis-associated protein 9 (Testis development protein NYD-SP16)
Protein function May play a role in testicular development/spermatogenesis and may be an important factor in male infertility.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF15824 SPATA9 1 → 252 Spermatogenesis-associated protein 9 Family
Tissue specificity TISSUE SPECIFICITY: Highly expressed in testes and pancreas. Low levels found in the heart, lungs, and brain. Very low expression detected in the placenta. No expression seen in skeletal muscle, liver, kidney, thymus, small intestine, colons, spleen, leuk
Sequence
Sequence length 254
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
1
Gene miRNA Gene ontology Other IDs Protein Associated diseases
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Show/Hide Unknown Diseases (1)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
CHRONIC OBSTRUCTIVE PULMONARY DISEASE — GWAS catalog
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Show/Hide Text Mining Associations (1)
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Choriocarcinoma Choriocarcinoma BEFREE 12493713
★★★★★
★☆☆☆☆
Found in Text Mining only