Gene Gene information from NCBI Gene database.
Entrez ID 83715
Gene name Espin
Gene symbol ESPN
Synonyms (NCBI Gene)
DFNB36LP2654USH1M
Chromosome 1
Chromosome location 1p36.31
Summary This gene encodes a multifunctional actin-bundling protein. It plays a major role in regulating the organization, dimensions, dynamics, and signaling capacities of the actin filament-rich, microvillus-type specializations that mediate sensory transduction
SNPs SNP information provided by dbSNP.
13
SNP ID Visualize variation Clinical significance Consequence
rs121908134 A>C Pathogenic Genic downstream transcript variant, missense variant, coding sequence variant
rs121908135 G>A,T Pathogenic, uncertain-significance Genic downstream transcript variant, missense variant, coding sequence variant
rs121908136 G>A Pathogenic Genic downstream transcript variant, missense variant, coding sequence variant
rs752649606 G>A,T Likely-pathogenic Splice donor variant, genic upstream transcript variant
rs754472294 C>- Pathogenic Coding sequence variant, genic downstream transcript variant, stop gained
miRNA miRNA information provided by mirtarbase database.
128
miRTarBase ID miRNA Experiments Reference
MIRT970253 hsa-miR-1295 CLIP-seq
MIRT970254 hsa-miR-1324 CLIP-seq
MIRT970255 hsa-miR-1538 CLIP-seq
MIRT970256 hsa-miR-1908 CLIP-seq
MIRT970257 hsa-miR-2682 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
21
GO ID Ontology Definition Evidence Reference
GO:0003779 Function Actin binding IEA
GO:0005737 Component Cytoplasm IBA
GO:0005737 Component Cytoplasm IEA
GO:0005856 Component Cytoskeleton IEA
GO:0005902 Component Microvillus IDA 29572253
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
606351 13281 ENSG00000187017
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
B1AK53
Protein name Espin (Autosomal recessive deafness type 36 protein) (Ectoplasmic specialization protein)
Protein function Multifunctional actin-bundling protein. Plays a major role in regulating the organization, dimension, dynamics and signaling capacities of the actin filament-rich microvilli in the mechanosensory and chemosensory cells (PubMed:29572253). Require
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF12796 Ank_2 6 101 Ankyrin repeats (3 copies) Repeat
PF12796 Ank_2 108 203 Ankyrin repeats (3 copies) Repeat
PF12796 Ank_2 142 237 Ankyrin repeats (3 copies) Repeat
PF12796 Ank_2 195 271 Ankyrin repeats (3 copies) Repeat
PF02205 WH2 648 675 WH2 motif Family
Sequence
MALEQALQAARQGELDVLRSLHAAGLLGPSLRDPLDALPVHHAARAGKLHCLRFLVEEAA
LPAAARARNGATPAHDASATGHLACLQWLLSQGGCRVQDKD
NSGATVLHLAARFGHPEVV
NWLLHHGGGDPTAATDMGALP
IHYAAAKGDFPSLRLLVEHYPEGVNAQTKNGATPLYLAC
QEGHLEVTQYLVQE
CGADPHARAHDGMTPLHAAAQMGHSPVIVWLVSCTDVSLSEQDKDG
ATAMHFAASRGHTKVLSWLLLHGGEISADLW
GGTPLHDAAENGELECCQILVVNGAELDV
RDRDGYTAADLSDFNGHSHCTRYLRTVENLSVEHRVLSRDPSAELEAKQPDSGMSSPNTT
VSVQPLNFDLSSPTSTLSNYDSCSSSHSSIKGQHPPCGLSSARAADIQSYMDMLNPELGL
PRGTIGKPTPPPPPPSFPPPPPPPGTQLPPPPPGYPAPKPPVGPQAADIYMQTKNKLRHV
ETEALKKELSSCDGHDGLRRQDSSRKPRAFSKQPSTGDYYRQLGRCPGETLAARPGMAHS
EEVRARQPARAGCPRLGPAARGSLEGPSAPPQAALLPGNHVPNGCAADPKASRELPPPPP
PPPPPLPEAASSPPPAPPLPLESAGPGCGQRRSSSSTGSTKSFNMMSPTGDNSELLAEIK
AGKSLKPTPQSKGLT
TVFSGIGQPAFQPDSPLPSVSPALSPVRSPTPPAAGFQPLLNGSL
VPVPPTTPAPGVQLDVEALIPTHDEQGRPIPEWKRQVMVRKMQLKMQEEEEQRRKEEEEE
ARLASMPAWRRDLLRKKLEEEREQKRKEEERQKQEELRREKEQSEKLRTLGYDESKLAPW
QRQVILKKGDIAKY
Sequence length 854
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
30
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Autosomal recessive nonsyndromic hearing loss 36 Pathogenic; Likely pathogenic rs2148538836, rs1644131579, rs1569770998, rs1569726455, rs1569771486, rs1643945526, rs1046987961, rs2522884028, rs752649606, rs754472294, rs1485674839, rs1643944047 RCV001728006
RCV001808246
RCV000004668
RCV000004669
RCV003332997
View all (7 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Deafness, autosomal recessive 36, without vestibular involvement Pathogenic rs1569712066 RCV000004674
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Deafness, without vestibular involvement, autosomal dominant Pathogenic; Likely pathogenic rs121908134, rs121908136, rs1569771486 RCV000004670
RCV000004672
RCV000004673
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Hearing loss, autosomal recessive Likely pathogenic; Pathogenic rs754472294 RCV001291325
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOSOMAL RECESSIVE ISOLATED SENSORINEURAL DEAFNESS TYPE DFNB Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DEAFNESS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Autosomal recessive non-syndromic sensorineural deafness type DFNB Non-Syndromic Sensorineural Deafness Orphanet
★☆☆☆☆
Found in Text Mining only
Bartter Disease Bartter syndrome BEFREE 21937999
★☆☆☆☆
Found in Text Mining only
Bartter Syndrome Bartter syndrome Pubtator 21937999 Associate
★☆☆☆☆
Found in Text Mining only
Bilateral Vestibulopathy Bilateral Vestibulopathy BEFREE 15286153, 29572253
★☆☆☆☆
Found in Text Mining only
Bilateral Vestibulopathy Bilateral Vestibulopathy HPO_DG
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Breast neoplasm Pubtator 32412047 Associate
★☆☆☆☆
Found in Text Mining only
Chronic kidney disease stage 5 Kidney Disease BEFREE 30859187
★☆☆☆☆
Found in Text Mining only
Deaf Mutism Deafness CTD_human_DG 15286153, 15930085
★☆☆☆☆
Found in Text Mining only
Deafness Deafness Pubtator 20505086 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Deafness, Acquired Deafness CTD_human_DG 15286153, 15930085
★☆☆☆☆
Found in Text Mining only