Gene Gene information from NCBI Gene database.
Entrez ID 8291
Gene name Dysferlin
Gene symbol DYSF
Synonyms (NCBI Gene)
FER1L1LGMD2BLGMDR2MMD1
Chromosome 2
Chromosome location 2p13.2
Summary The protein encoded by this gene belongs to the ferlin family and is a skeletal muscle protein found associated with the sarcolemma. It is involved in muscle contraction and contains C2 domains that play a role in calcium-mediated membrane fusion events,
SNPs SNP information provided by dbSNP.
391
SNP ID Visualize variation Clinical significance Consequence
rs28937581 G>T Pathogenic Coding sequence variant, missense variant, non coding transcript variant
rs34061568 A>C Uncertain-significance, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant, non coding transcript variant
rs34387018 C>A,G,T Benign, conflicting-interpretations-of-pathogenicity Synonymous variant, coding sequence variant, missense variant, non coding transcript variant
rs34997054 G>A Benign-likely-benign, likely-pathogenic, benign Coding sequence variant, missense variant, non coding transcript variant
rs61746816 C>A,T Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant, synonymous variant, non coding transcript variant
miRNA miRNA information provided by mirtarbase database.
11
miRTarBase ID miRNA Experiments Reference
MIRT949882 hsa-miR-1252 CLIP-seq
MIRT949883 hsa-miR-1275 CLIP-seq
MIRT949884 hsa-miR-3175 CLIP-seq
MIRT949885 hsa-miR-3940-5p CLIP-seq
MIRT949886 hsa-miR-4434 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
35
GO ID Ontology Definition Evidence Reference
GO:0002280 Process Monocyte activation involved in immune response IEA
GO:0002280 Process Monocyte activation involved in immune response IMP 18276788
GO:0002281 Process Macrophage activation involved in immune response IEA
GO:0002281 Process Macrophage activation involved in immune response IMP 18276788
GO:0005509 Function Calcium ion binding IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
603009 3097 ENSG00000135636
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O75923
Protein name Dysferlin (Dystrophy-associated fer-1-like protein) (Fer-1-like protein 1)
Protein function Key calcium ion sensor involved in the Ca(2+)-triggered synaptic vesicle-plasma membrane fusion. Plays a role in the sarcolemma repair mechanism of both skeletal muscle and cardiomyocytes that permits rapid resealing of membranes disrupted by me
PDB 4CAH , 4CAI , 4IHB , 4IQH , 7JOF , 7K6B , 7KRB , 9B8K , 9B8L
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00168 C2 1 103 C2 domain Domain
PF00168 C2 220 323 C2 domain Domain
PF08151 FerI 324 374 FerI (NUC094) domain Domain
PF00168 C2 379 496 C2 domain Domain
PF08165 FerA 695 759 FerA (NUC095) domain Domain
PF08150 FerB 786 859 FerB (NUC096) domain Domain
PF00168 C2 1152 1260 C2 domain Domain
PF00168 C2 1333 1439 C2 domain Domain
PF00168 C2 1578 1678 C2 domain Domain
PF00168 C2 1812 1944 C2 domain Domain
PF16165 Ferlin_C 1971 2075 Ferlin C-terminus Family
Tissue specificity TISSUE SPECIFICITY: Expressed in skeletal muscle, myoblast, myotube and in the syncytiotrophoblast (STB) of the placenta (at protein level). Ubiquitous. Highly expressed in skeletal muscle. Also found in heart, brain, spleen, intestine, placenta and at lo
Sequence
MLRVFILYAENVHTPDTDISDAYCSAVFAGVKKRTKVIKNSVNPVWNEGFEWDLKGIPLD
QGSELHVVVKDHETMGRNRFLGEAKVPLREVLATPSLSASFNA
PLLDTKKQPTGASLVLQ
VSYTPLPGAVPLFPPPTPLEPSPTLPDLDVVADTGGEEDTEDQGLTGDEAEPFLDQSGGP
GAPTTPRKLPSRPPPHYPGIKRKRSAPTSRKLLSDKPQDFQIRVQVIEGRQLPGVNIKPV
VKVTAAGQTKRTRIHKGNSPLFNETLFFNLFDSPGELFDEPIFITVVDSRSLRTDALLGE
FRMDVGTIYREPRHAYLRKWLLL
SDPDDFSAGARGYLKTSLCVLGPGDEAPLERKDPSED
KEDIESNLLRPTGV
ALRGAHFCLKVFRAEDLPQMDDAVMDNVKQIFGFESNKKNLVDPFV
EVSFAGKMLCSKILEKTANPQWNQNITLPAMFPSMCEKMRIRIIDWDRLTHNDIVATTYL
SMSKISAPGGEIEEEP
AGAVKPSKASDLDDYLGFLPTFGPCYINLYGSPREFTGFPDPYT
ELNTGKGEGVAYRGRLLLSLETKLVEHSEQKVEDLPADDILRVEKYLRRRKYSLFAAFYS
ATMLQDVDDAIQFEVSIGNYGNKFDMTCLPLASTTQYSRAVFDGCHYYYLPWGNVKPVVV
LSSYWEDISHRIETQNQLLGIADRLEAGLEQVHLALKAQCSTEDVDSLVAQLTDELIAGC
SQPLGDIHETPSATHLDQYLYQLRTHHLSQITEAALALK
LGHSELPAALEQAEDWLLRLR
ALAEEPQNSLPDIVIWMLQGDKRVAYQRVPAHQVLFSRRGANYCGKNCGKLQTIFLKYPM
EKVPGARMPVQIRVKLWFG
LSVDEKEFNQFAEGKLSVFAETYENETKLALVGNWGTTGLT
YPKFSDVTGKIKLPKDSFRPSAGWTWAGDWFVCPEKTLLHDMDAGHLSFVEEVFENQTRL
PGGQWIYMSDNYTDVNGEKVLPKDDIECPLGWKWEDEEWSTDLNRAVDEQGWEYSITIPP
ERKPKHWVPAEKMYYTHRRRRWVRLRRRDLSQMEALKRHRQAEAEGEGWEYASLFGWKFH
LEYRKTDAFRRRRWRRRMEPLEKTGPAAVFALEGALGGVMDDKSEDSMSVSTLSFGVNRP
TISCIFDYGNRYHLRCYMYQARDLAAMDKDSFSDPYAIVSFLHQSQKTVVVKNTLNPTWD
QTLIFYEIEIFGEPATVAEQPPSIVVELYDHDTYGADEFMGRCICQPSLERMPRLAWFPL

TRGSQPSGELLASFELIQREKPAIHHIPGFEVQETSRILDESEDTDLPYPPPQREANIYM
VPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVVECGGQTVQSCVIRNLRKNPNF
DICTLFMEVMLPREELYCPPITVKVIDNRQFGRRPVVGQCTIRSLESFLCDPYSAESPS
P
QGGPDDVSLLSPGEDVLIDIDDKEPLIPIQEEEFIDWWSKFFASIGEREKCGSYLEKDFD
TLKVYDTQLENVEAFEGLSDFCNTFKLYRGKTQEETEDPSVIGEFKGLFKIYPLPEDPAI
PMPPRQFHQLAAQGPQECLVRIYIVRAFGLQPKDPNGKCDPYIKISIGKKSVSDQDNYIP
CTLEPVFGKMFELTCTLPLEKDLKITLYDYDLLSKDEKIGETVVDLENRLLSKFGARC
GL
PQTYCVSGPNQWRDQLRPSQLLHLFCQQHRVKAPVYRTDRVMFQDKEYSIEEIEAGRIPN
PHLGPVEERLALHVLQQQGLVPEHVESRPLYSPLQPDIEQGKLQMWVDLFPKALGRPGPP
FNITPRRARRFFLRCIIWNTRDVILDDLSLTGEKMSDIYVKGWMIGFEEHKQKTDVHYRS
LGGEGNFNWRFIFPFDYLPAEQVCTIAKKDAFWRLDKTESKIPARVVFQIWDNDKFSFDD
FLGSLQLDLNRMPKPAKTAKKCSL
DQLDDAFHPEWFVSLFEQKTVKGWWPCVAEEGEKKI
LAGKLEMTLEIVAESEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILW
RRFRWAIILFIILFILLLFLAIFIYAFPNYAAMKL
VKPFS
Sequence length 2080
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Smooth Muscle Contraction
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
73
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Abnormality of the musculature Pathogenic; Likely pathogenic rs398123802, rs2152682705, rs2152728763, rs2152760967, rs2152855822, rs1558584694, rs2152940909, rs2152971975, rs369607332, rs121908955, rs758107024 RCV001814050
RCV001814314
RCV001814403
RCV001814514
RCV001814573
View all (6 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Absent muscle fiber dysferlin Pathogenic rs1553551006 RCV000626847
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Acute myeloid leukemia Pathogenic; Likely pathogenic rs370874727, rs2152728575, rs886044537 RCV005889935
RCV005926827
RCV005895898
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Autosomal recessive limb-girdle muscular dystrophy Pathogenic; Likely pathogenic rs398123763, rs398123764, rs202044973, rs398123767, rs398123768, rs398123770, rs377735262, rs398123774, rs140108514, rs398123782, rs398123787, rs398123788, rs398123789, rs141704244, rs398123793
View all (134 more)
RCV005600649
RCV006252429
RCV006445495
RCV006252430
RCV006249585
View all (153 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Arthralgia Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ARTHRITIS, JUVENILE CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ASTHMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ATTENTION DEFICIT HYPERACTIVITY DISORDER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adult type dermatomyositis Dermatomyositis BEFREE 30907425
★☆☆☆☆
Found in Text Mining only
Alpha-Sarcoglycanopathies Limb-girdle muscular dystrophy BEFREE 10069710
★☆☆☆☆
Found in Text Mining only
Alstrom Syndrome Alstrom Syndrome BEFREE 26077327
★☆☆☆☆
Found in Text Mining only
Alstrom Syndrome Alstrom syndrome Pubtator 26077327 Associate
★☆☆☆☆
Found in Text Mining only
Amyloidosis Amyloidosis BEFREE 18306167, 20544924
★☆☆☆☆
Found in Text Mining only
Anterior Compartment Syndrome Anterior compartment syndrome Pubtator 19528035, 22318734, 26444858 Associate
★☆☆☆☆
Found in Text Mining only
Asthma Asthma Pubtator 34510493 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Becker Muscular Dystrophy Becker Muscular Dystrophy BEFREE 12410383, 16183658
★☆☆☆☆
Found in Text Mining only
Brachial Plexus Neuropathies Brachial plexus neuropathy HPO_DG
★☆☆☆☆
Found in Text Mining only
Bronchopulmonary Dysplasia Bronchopulmonary dysplasia Pubtator 40244055 Associate
★☆☆☆☆
Found in Text Mining only