Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Transcription factors Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID	826
Gene name	Calpain small subunit 1
Gene symbol	CAPNS1
Synonyms (NCBI Gene)	CALPAIN4CANPCANPSCAPN4CDPSCSS1PPH6
Chromosome	19
Chromosome location	19q13.12
Summary	This gene is a member of the calpain small subunit family. Calpains are calcium-dependent cysteine proteinases that are widely distributed in mammalian cells. Calpains operate as heterodimers, comprising a specific large catalytic subunit (calpain 1 subun

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miRTarBase ID	miRNA	Experiments	Reference
MIRT023039	hsa-miR-124-3p	Microarray	18668037
MIRT048635	hsa-miR-99a-5p	CLASH	23622248
MIRT048473	hsa-miR-100-5p	CLASH	23622248
MIRT047067	hsa-miR-183-5p	CLASH	23622248
MIRT047067	hsa-miR-183-5p	CLASH	23622248
MIRT044827	hsa-miR-320a	CLASH	23622248
MIRT042428	hsa-miR-425-3p	CLASH	23622248
MIRT041246	hsa-miR-193b-3p	CLASH	23622248
MIRT041246	hsa-miR-193b-3p	CLASH	23622248
MIRT039201	hsa-miR-769-5p	CLASH	23622248
MIRT038378	hsa-miR-296-3p	CLASH	23622248
MIRT037468	hsa-miR-744-5p	CLASH	23622248
MIRT712652	hsa-miR-6801-3p	HITS-CLIP	19536157
MIRT712651	hsa-miR-6810-3p	HITS-CLIP	19536157
MIRT712650	hsa-miR-331-3p	HITS-CLIP	19536157
MIRT712649	hsa-miR-7106-3p	HITS-CLIP	19536157
MIRT712652	hsa-miR-6801-3p	HITS-CLIP	19536157
MIRT712651	hsa-miR-6810-3p	HITS-CLIP	19536157
MIRT712650	hsa-miR-331-3p	HITS-CLIP	19536157
MIRT712649	hsa-miR-7106-3p	HITS-CLIP	19536157
MIRT023039	hsa-miR-124-3p	ImmunoblotLuciferase reporter assayqRT-PCR	26530859
MIRT023039	hsa-miR-124-3p	ImmunoblotLuciferase reporter assayqRT-PCR	26530859
MIRT048635	hsa-miR-99a-5p	Luciferase reporter assayqRT-PCRWestern blot	27994509
MIRT048635	hsa-miR-99a-5p	Luciferase reporter assayqRT-PCRWestern blot	27994509
MIRT044827	hsa-miR-320a	RNA-seqqRT-PCR	31801218
MIRT712652	hsa-miR-6801-3p	HITS-CLIP	19536157
MIRT712651	hsa-miR-6810-3p	HITS-CLIP	19536157
MIRT712650	hsa-miR-331-3p	HITS-CLIP	19536157
MIRT712649	hsa-miR-7106-3p	HITS-CLIP	19536157
MIRT712652	hsa-miR-6801-3p	HITS-CLIP	19536157
MIRT712651	hsa-miR-6810-3p	HITS-CLIP	19536157
MIRT712650	hsa-miR-331-3p	HITS-CLIP	19536157
MIRT712649	hsa-miR-7106-3p	HITS-CLIP	19536157
MIRT862143	hsa-miR-1207-5p	CLIP-seq
MIRT862144	hsa-miR-1238	CLIP-seq
MIRT862145	hsa-miR-124	CLIP-seq
MIRT862146	hsa-miR-1253	CLIP-seq
MIRT862147	hsa-miR-1343	CLIP-seq
MIRT862148	hsa-miR-1909	CLIP-seq
MIRT862149	hsa-miR-2861	CLIP-seq
MIRT862150	hsa-miR-296-5p	CLIP-seq
MIRT862151	hsa-miR-302a	CLIP-seq
MIRT862152	hsa-miR-302b	CLIP-seq
MIRT862153	hsa-miR-302c	CLIP-seq
MIRT862154	hsa-miR-302d	CLIP-seq
MIRT862155	hsa-miR-302e	CLIP-seq
MIRT862156	hsa-miR-3132	CLIP-seq
MIRT862157	hsa-miR-3175	CLIP-seq
MIRT862158	hsa-miR-3192	CLIP-seq
MIRT862159	hsa-miR-320e	CLIP-seq
MIRT862160	hsa-miR-3612	CLIP-seq
MIRT862161	hsa-miR-3622b-5p	CLIP-seq
MIRT862162	hsa-miR-3650	CLIP-seq
MIRT862163	hsa-miR-372	CLIP-seq
MIRT862164	hsa-miR-373	CLIP-seq
MIRT862165	hsa-miR-3944-5p	CLIP-seq
MIRT862166	hsa-miR-4253	CLIP-seq
MIRT862167	hsa-miR-4300	CLIP-seq
MIRT862168	hsa-miR-4308	CLIP-seq
MIRT862169	hsa-miR-4443	CLIP-seq
MIRT862170	hsa-miR-4453	CLIP-seq
MIRT862171	hsa-miR-4455	CLIP-seq
MIRT862172	hsa-miR-4457	CLIP-seq
MIRT862173	hsa-miR-4468	CLIP-seq
MIRT862174	hsa-miR-4471	CLIP-seq
MIRT862175	hsa-miR-4481	CLIP-seq
MIRT862176	hsa-miR-4505	CLIP-seq
MIRT862177	hsa-miR-4514	CLIP-seq
MIRT862178	hsa-miR-4538	CLIP-seq
MIRT862179	hsa-miR-4633-3p	CLIP-seq
MIRT862180	hsa-miR-4645-5p	CLIP-seq
MIRT862181	hsa-miR-4673	CLIP-seq
MIRT862182	hsa-miR-4691-5p	CLIP-seq
MIRT862183	hsa-miR-4692	CLIP-seq
MIRT862184	hsa-miR-4716-3p	CLIP-seq
MIRT862185	hsa-miR-4736	CLIP-seq
MIRT862186	hsa-miR-4745-5p	CLIP-seq
MIRT862187	hsa-miR-4763-3p	CLIP-seq
MIRT862188	hsa-miR-4764-5p	CLIP-seq
MIRT862189	hsa-miR-4788	CLIP-seq
MIRT862190	hsa-miR-4802-5p	CLIP-seq
MIRT862191	hsa-miR-486-3p	CLIP-seq
MIRT862192	hsa-miR-506	CLIP-seq
MIRT862193	hsa-miR-508-5p	CLIP-seq
MIRT862194	hsa-miR-513b	CLIP-seq
MIRT862195	hsa-miR-516b	CLIP-seq
MIRT862196	hsa-miR-520a-3p	CLIP-seq
MIRT862197	hsa-miR-520b	CLIP-seq
MIRT862198	hsa-miR-520c-3p	CLIP-seq
MIRT862199	hsa-miR-520d-3p	CLIP-seq
MIRT862200	hsa-miR-520e	CLIP-seq
MIRT862201	hsa-miR-545	CLIP-seq
MIRT862202	hsa-miR-548an	CLIP-seq
MIRT862203	hsa-miR-564	CLIP-seq
MIRT862204	hsa-miR-580	CLIP-seq
MIRT862205	hsa-miR-609	CLIP-seq
MIRT862206	hsa-miR-625	CLIP-seq
MIRT862207	hsa-miR-650	CLIP-seq
MIRT862208	hsa-miR-661	CLIP-seq
MIRT862209	hsa-miR-920	CLIP-seq
MIRT862210	hsa-miR-940	CLIP-seq
MIRT862211	hsa-miR-1227	CLIP-seq
MIRT862144	hsa-miR-1238	CLIP-seq
MIRT862145	hsa-miR-124	CLIP-seq
MIRT862146	hsa-miR-1253	CLIP-seq
MIRT862212	hsa-miR-1268	CLIP-seq
MIRT862213	hsa-miR-1268b	CLIP-seq
MIRT862214	hsa-miR-1271	CLIP-seq
MIRT862215	hsa-miR-1324	CLIP-seq
MIRT862147	hsa-miR-1343	CLIP-seq
MIRT862216	hsa-miR-185	CLIP-seq
MIRT862148	hsa-miR-1909	CLIP-seq
MIRT862217	hsa-miR-193a-5p	CLIP-seq
MIRT862218	hsa-miR-214	CLIP-seq
MIRT862149	hsa-miR-2861	CLIP-seq
MIRT862151	hsa-miR-302a	CLIP-seq
MIRT862152	hsa-miR-302b	CLIP-seq
MIRT862153	hsa-miR-302c	CLIP-seq
MIRT862154	hsa-miR-302d	CLIP-seq
MIRT862155	hsa-miR-302e	CLIP-seq
MIRT862219	hsa-miR-3128	CLIP-seq
MIRT862220	hsa-miR-3158-5p	CLIP-seq
MIRT862221	hsa-miR-3166	CLIP-seq
MIRT862157	hsa-miR-3175	CLIP-seq
MIRT862222	hsa-miR-3179	CLIP-seq
MIRT862158	hsa-miR-3192	CLIP-seq
MIRT862159	hsa-miR-320e	CLIP-seq
MIRT862223	hsa-miR-337-3p	CLIP-seq
MIRT862160	hsa-miR-3612	CLIP-seq
MIRT862224	hsa-miR-3619-5p	CLIP-seq
MIRT862161	hsa-miR-3622b-5p	CLIP-seq
MIRT862162	hsa-miR-3650	CLIP-seq
MIRT862163	hsa-miR-372	CLIP-seq
MIRT862164	hsa-miR-373	CLIP-seq
MIRT862225	hsa-miR-3918	CLIP-seq
MIRT862165	hsa-miR-3944-5p	CLIP-seq
MIRT862166	hsa-miR-4253	CLIP-seq
MIRT862226	hsa-miR-4291	CLIP-seq
MIRT862227	hsa-miR-4418	CLIP-seq
MIRT862169	hsa-miR-4443	CLIP-seq
MIRT862171	hsa-miR-4455	CLIP-seq
MIRT862228	hsa-miR-4456	CLIP-seq
MIRT862172	hsa-miR-4457	CLIP-seq
MIRT862173	hsa-miR-4468	CLIP-seq
MIRT862175	hsa-miR-4481	CLIP-seq
MIRT862229	hsa-miR-4512	CLIP-seq
MIRT862179	hsa-miR-4633-3p	CLIP-seq
MIRT862230	hsa-miR-4685-5p	CLIP-seq
MIRT862182	hsa-miR-4691-5p	CLIP-seq
MIRT862231	hsa-miR-4720-5p	CLIP-seq
MIRT862186	hsa-miR-4745-5p	CLIP-seq
MIRT862232	hsa-miR-4755-3p	CLIP-seq
MIRT862188	hsa-miR-4764-5p	CLIP-seq
MIRT862233	hsa-miR-4771	CLIP-seq
MIRT862189	hsa-miR-4788	CLIP-seq
MIRT862234	hsa-miR-4799-3p	CLIP-seq
MIRT862190	hsa-miR-4802-5p	CLIP-seq
MIRT862191	hsa-miR-486-3p	CLIP-seq
MIRT862192	hsa-miR-506	CLIP-seq
MIRT862235	hsa-miR-509-3-5p	CLIP-seq
MIRT862236	hsa-miR-509-5p	CLIP-seq
MIRT862194	hsa-miR-513b	CLIP-seq
MIRT862195	hsa-miR-516b	CLIP-seq
MIRT862196	hsa-miR-520a-3p	CLIP-seq
MIRT862197	hsa-miR-520b	CLIP-seq
MIRT862198	hsa-miR-520c-3p	CLIP-seq
MIRT862199	hsa-miR-520d-3p	CLIP-seq
MIRT862200	hsa-miR-520e	CLIP-seq
MIRT862201	hsa-miR-545	CLIP-seq
MIRT862202	hsa-miR-548an	CLIP-seq
MIRT862237	hsa-miR-555	CLIP-seq
MIRT862203	hsa-miR-564	CLIP-seq
MIRT862204	hsa-miR-580	CLIP-seq
MIRT862205	hsa-miR-609	CLIP-seq
MIRT862238	hsa-miR-645	CLIP-seq
MIRT862207	hsa-miR-650	CLIP-seq
MIRT862239	hsa-miR-761	CLIP-seq
MIRT862240	hsa-miR-922	CLIP-seq
MIRT862241	hsa-miR-96	CLIP-seq
MIRT862143	hsa-miR-1207-5p	CLIP-seq
MIRT862187	hsa-miR-4763-3p	CLIP-seq
MIRT862148	hsa-miR-1909	CLIP-seq
MIRT862149	hsa-miR-2861	CLIP-seq
MIRT1556128	hsa-miR-3138	CLIP-seq
MIRT862157	hsa-miR-3175	CLIP-seq
MIRT862162	hsa-miR-3650	CLIP-seq
MIRT862225	hsa-miR-3918	CLIP-seq
MIRT862165	hsa-miR-3944-5p	CLIP-seq
MIRT862171	hsa-miR-4455	CLIP-seq
MIRT862228	hsa-miR-4456	CLIP-seq
MIRT862229	hsa-miR-4512	CLIP-seq
MIRT1556129	hsa-miR-4520a-3p	CLIP-seq
MIRT1556130	hsa-miR-541	CLIP-seq
MIRT862205	hsa-miR-609	CLIP-seq
MIRT1556131	hsa-miR-654-5p	CLIP-seq
MIRT862143	hsa-miR-1207-5p	CLIP-seq
MIRT862144	hsa-miR-1238	CLIP-seq
MIRT862145	hsa-miR-124	CLIP-seq
MIRT862146	hsa-miR-1253	CLIP-seq
MIRT862214	hsa-miR-1271	CLIP-seq
MIRT862147	hsa-miR-1343	CLIP-seq
MIRT862148	hsa-miR-1909	CLIP-seq
MIRT862217	hsa-miR-193a-5p	CLIP-seq
MIRT862218	hsa-miR-214	CLIP-seq
MIRT862149	hsa-miR-2861	CLIP-seq
MIRT862150	hsa-miR-296-5p	CLIP-seq
MIRT862151	hsa-miR-302a	CLIP-seq
MIRT862152	hsa-miR-302b	CLIP-seq
MIRT862153	hsa-miR-302c	CLIP-seq
MIRT862154	hsa-miR-302d	CLIP-seq
MIRT862155	hsa-miR-302e	CLIP-seq
MIRT862219	hsa-miR-3128	CLIP-seq
MIRT862156	hsa-miR-3132	CLIP-seq
MIRT1556128	hsa-miR-3138	CLIP-seq
MIRT1955774	hsa-miR-3150a-3p	CLIP-seq
MIRT862157	hsa-miR-3175	CLIP-seq
MIRT862222	hsa-miR-3179	CLIP-seq
MIRT862159	hsa-miR-320e	CLIP-seq
MIRT862223	hsa-miR-337-3p	CLIP-seq
MIRT862160	hsa-miR-3612	CLIP-seq
MIRT862224	hsa-miR-3619-5p	CLIP-seq
MIRT862161	hsa-miR-3622b-5p	CLIP-seq
MIRT862162	hsa-miR-3650	CLIP-seq
MIRT862163	hsa-miR-372	CLIP-seq
MIRT862164	hsa-miR-373	CLIP-seq
MIRT862225	hsa-miR-3918	CLIP-seq
MIRT862165	hsa-miR-3944-5p	CLIP-seq
MIRT862166	hsa-miR-4253	CLIP-seq
MIRT862226	hsa-miR-4291	CLIP-seq
MIRT862168	hsa-miR-4308	CLIP-seq
MIRT862169	hsa-miR-4443	CLIP-seq
MIRT862170	hsa-miR-4453	CLIP-seq
MIRT862171	hsa-miR-4455	CLIP-seq
MIRT862228	hsa-miR-4456	CLIP-seq
MIRT862172	hsa-miR-4457	CLIP-seq
MIRT862174	hsa-miR-4471	CLIP-seq
MIRT862175	hsa-miR-4481	CLIP-seq
MIRT1955775	hsa-miR-4501	CLIP-seq
MIRT862229	hsa-miR-4512	CLIP-seq
MIRT862177	hsa-miR-4514	CLIP-seq
MIRT1556129	hsa-miR-4520a-3p	CLIP-seq
MIRT862178	hsa-miR-4538	CLIP-seq
MIRT862179	hsa-miR-4633-3p	CLIP-seq
MIRT862180	hsa-miR-4645-5p	CLIP-seq
MIRT862181	hsa-miR-4673	CLIP-seq
MIRT1955776	hsa-miR-4690-5p	CLIP-seq
MIRT862182	hsa-miR-4691-5p	CLIP-seq
MIRT862183	hsa-miR-4692	CLIP-seq
MIRT862184	hsa-miR-4716-3p	CLIP-seq
MIRT862231	hsa-miR-4720-5p	CLIP-seq
MIRT862186	hsa-miR-4745-5p	CLIP-seq
MIRT1955777	hsa-miR-4758-3p	CLIP-seq
MIRT862187	hsa-miR-4763-3p	CLIP-seq
MIRT862188	hsa-miR-4764-5p	CLIP-seq
MIRT862189	hsa-miR-4788	CLIP-seq
MIRT862234	hsa-miR-4799-3p	CLIP-seq
MIRT862190	hsa-miR-4802-5p	CLIP-seq
MIRT862191	hsa-miR-486-3p	CLIP-seq
MIRT862192	hsa-miR-506	CLIP-seq
MIRT862193	hsa-miR-508-5p	CLIP-seq
MIRT862194	hsa-miR-513b	CLIP-seq
MIRT862195	hsa-miR-516b	CLIP-seq
MIRT862196	hsa-miR-520a-3p	CLIP-seq
MIRT862197	hsa-miR-520b	CLIP-seq
MIRT862198	hsa-miR-520c-3p	CLIP-seq
MIRT862199	hsa-miR-520d-3p	CLIP-seq
MIRT862200	hsa-miR-520e	CLIP-seq
MIRT1556130	hsa-miR-541	CLIP-seq
MIRT862202	hsa-miR-548an	CLIP-seq
MIRT862237	hsa-miR-555	CLIP-seq
MIRT862203	hsa-miR-564	CLIP-seq
MIRT862204	hsa-miR-580	CLIP-seq
MIRT862205	hsa-miR-609	CLIP-seq
MIRT862206	hsa-miR-625	CLIP-seq
MIRT862238	hsa-miR-645	CLIP-seq
MIRT862207	hsa-miR-650	CLIP-seq
MIRT1556131	hsa-miR-654-5p	CLIP-seq
MIRT862208	hsa-miR-661	CLIP-seq
MIRT1955778	hsa-miR-676	CLIP-seq
MIRT862239	hsa-miR-761	CLIP-seq
MIRT862240	hsa-miR-922	CLIP-seq
MIRT1955779	hsa-miR-939	CLIP-seq
MIRT862210	hsa-miR-940	CLIP-seq
MIRT862241	hsa-miR-96	CLIP-seq
MIRT862143	hsa-miR-1207-5p	CLIP-seq
MIRT862211	hsa-miR-1227	CLIP-seq
MIRT862144	hsa-miR-1238	CLIP-seq
MIRT862212	hsa-miR-1268	CLIP-seq
MIRT862213	hsa-miR-1268b	CLIP-seq
MIRT862214	hsa-miR-1271	CLIP-seq
MIRT862147	hsa-miR-1343	CLIP-seq
MIRT862148	hsa-miR-1909	CLIP-seq
MIRT862149	hsa-miR-2861	CLIP-seq
MIRT862150	hsa-miR-296-5p	CLIP-seq
MIRT862151	hsa-miR-302a	CLIP-seq
MIRT862152	hsa-miR-302b	CLIP-seq
MIRT862153	hsa-miR-302c	CLIP-seq
MIRT862154	hsa-miR-302d	CLIP-seq
MIRT862155	hsa-miR-302e	CLIP-seq
MIRT862156	hsa-miR-3132	CLIP-seq
MIRT1955774	hsa-miR-3150a-3p	CLIP-seq
MIRT862157	hsa-miR-3175	CLIP-seq
MIRT862222	hsa-miR-3179	CLIP-seq
MIRT862158	hsa-miR-3192	CLIP-seq
MIRT862160	hsa-miR-3612	CLIP-seq
MIRT862161	hsa-miR-3622b-5p	CLIP-seq
MIRT862162	hsa-miR-3650	CLIP-seq
MIRT862163	hsa-miR-372	CLIP-seq
MIRT862164	hsa-miR-373	CLIP-seq
MIRT862225	hsa-miR-3918	CLIP-seq
MIRT862165	hsa-miR-3944-5p	CLIP-seq
MIRT862166	hsa-miR-4253	CLIP-seq
MIRT862167	hsa-miR-4300	CLIP-seq
MIRT862168	hsa-miR-4308	CLIP-seq
MIRT862169	hsa-miR-4443	CLIP-seq
MIRT862171	hsa-miR-4455	CLIP-seq
MIRT862228	hsa-miR-4456	CLIP-seq
MIRT862172	hsa-miR-4457	CLIP-seq
MIRT862173	hsa-miR-4468	CLIP-seq
MIRT862175	hsa-miR-4481	CLIP-seq
MIRT862176	hsa-miR-4505	CLIP-seq
MIRT862229	hsa-miR-4512	CLIP-seq
MIRT862230	hsa-miR-4685-5p	CLIP-seq
MIRT862182	hsa-miR-4691-5p	CLIP-seq
MIRT862185	hsa-miR-4736	CLIP-seq
MIRT862186	hsa-miR-4745-5p	CLIP-seq
MIRT862232	hsa-miR-4755-3p	CLIP-seq
MIRT862187	hsa-miR-4763-3p	CLIP-seq
MIRT862188	hsa-miR-4764-5p	CLIP-seq
MIRT862189	hsa-miR-4788	CLIP-seq
MIRT862190	hsa-miR-4802-5p	CLIP-seq
MIRT862191	hsa-miR-486-3p	CLIP-seq
MIRT862194	hsa-miR-513b	CLIP-seq
MIRT862196	hsa-miR-520a-3p	CLIP-seq
MIRT862197	hsa-miR-520b	CLIP-seq
MIRT862198	hsa-miR-520c-3p	CLIP-seq
MIRT862199	hsa-miR-520d-3p	CLIP-seq
MIRT862200	hsa-miR-520e	CLIP-seq
MIRT1556130	hsa-miR-541	CLIP-seq
MIRT862205	hsa-miR-609	CLIP-seq
MIRT862238	hsa-miR-645	CLIP-seq
MIRT862207	hsa-miR-650	CLIP-seq
MIRT1556131	hsa-miR-654-5p	CLIP-seq
MIRT862208	hsa-miR-661	CLIP-seq
MIRT862209	hsa-miR-920	CLIP-seq
MIRT1955779	hsa-miR-939	CLIP-seq
MIRT862241	hsa-miR-96	CLIP-seq
MIRT862211	hsa-miR-1227	CLIP-seq
MIRT862148	hsa-miR-1909	CLIP-seq
MIRT862156	hsa-miR-3132	CLIP-seq
MIRT862222	hsa-miR-3179	CLIP-seq
MIRT862170	hsa-miR-4453	CLIP-seq
MIRT862171	hsa-miR-4455	CLIP-seq
MIRT862178	hsa-miR-4538	CLIP-seq
MIRT862179	hsa-miR-4633-3p	CLIP-seq
MIRT862195	hsa-miR-516b	CLIP-seq
MIRT862203	hsa-miR-564	CLIP-seq
MIRT862208	hsa-miR-661	CLIP-seq
MIRT862149	hsa-miR-2861	CLIP-seq
MIRT862211	hsa-miR-1227	CLIP-seq
MIRT862212	hsa-miR-1268	CLIP-seq
MIRT862213	hsa-miR-1268b	CLIP-seq
MIRT862214	hsa-miR-1271	CLIP-seq
MIRT862148	hsa-miR-1909	CLIP-seq
MIRT862149	hsa-miR-2861	CLIP-seq
MIRT862151	hsa-miR-302a	CLIP-seq
MIRT862152	hsa-miR-302b	CLIP-seq
MIRT862153	hsa-miR-302c	CLIP-seq
MIRT862154	hsa-miR-302d	CLIP-seq
MIRT862155	hsa-miR-302e	CLIP-seq
MIRT862156	hsa-miR-3132	CLIP-seq
MIRT1556128	hsa-miR-3138	CLIP-seq
MIRT1955774	hsa-miR-3150a-3p	CLIP-seq
MIRT862157	hsa-miR-3175	CLIP-seq
MIRT862222	hsa-miR-3179	CLIP-seq
MIRT862160	hsa-miR-3612	CLIP-seq
MIRT862161	hsa-miR-3622b-5p	CLIP-seq
MIRT862162	hsa-miR-3650	CLIP-seq
MIRT862163	hsa-miR-372	CLIP-seq
MIRT862164	hsa-miR-373	CLIP-seq
MIRT862225	hsa-miR-3918	CLIP-seq
MIRT862165	hsa-miR-3944-5p	CLIP-seq
MIRT862166	hsa-miR-4253	CLIP-seq
MIRT862169	hsa-miR-4443	CLIP-seq
MIRT862170	hsa-miR-4453	CLIP-seq
MIRT862171	hsa-miR-4455	CLIP-seq
MIRT862228	hsa-miR-4456	CLIP-seq
MIRT862172	hsa-miR-4457	CLIP-seq
MIRT862175	hsa-miR-4481	CLIP-seq
MIRT862229	hsa-miR-4512	CLIP-seq
MIRT1556129	hsa-miR-4520a-3p	CLIP-seq
MIRT862178	hsa-miR-4538	CLIP-seq
MIRT862179	hsa-miR-4633-3p	CLIP-seq
MIRT862230	hsa-miR-4685-5p	CLIP-seq
MIRT862186	hsa-miR-4745-5p	CLIP-seq
MIRT862232	hsa-miR-4755-3p	CLIP-seq
MIRT862189	hsa-miR-4788	CLIP-seq
MIRT862190	hsa-miR-4802-5p	CLIP-seq
MIRT862194	hsa-miR-513b	CLIP-seq
MIRT862195	hsa-miR-516b	CLIP-seq
MIRT862196	hsa-miR-520a-3p	CLIP-seq
MIRT862197	hsa-miR-520b	CLIP-seq
MIRT862198	hsa-miR-520c-3p	CLIP-seq
MIRT862199	hsa-miR-520d-3p	CLIP-seq
MIRT862200	hsa-miR-520e	CLIP-seq
MIRT1556130	hsa-miR-541	CLIP-seq
MIRT862203	hsa-miR-564	CLIP-seq
MIRT862205	hsa-miR-609	CLIP-seq
MIRT862238	hsa-miR-645	CLIP-seq
MIRT862207	hsa-miR-650	CLIP-seq
MIRT1556131	hsa-miR-654-5p	CLIP-seq
MIRT862208	hsa-miR-661	CLIP-seq
MIRT1955779	hsa-miR-939	CLIP-seq
MIRT862241	hsa-miR-96	CLIP-seq
MIRT862143	hsa-miR-1207-5p	CLIP-seq
MIRT862211	hsa-miR-1227	CLIP-seq
MIRT862212	hsa-miR-1268	CLIP-seq
MIRT862213	hsa-miR-1268b	CLIP-seq
MIRT862214	hsa-miR-1271	CLIP-seq
MIRT862148	hsa-miR-1909	CLIP-seq
MIRT862149	hsa-miR-2861	CLIP-seq
MIRT862151	hsa-miR-302a	CLIP-seq
MIRT862152	hsa-miR-302b	CLIP-seq
MIRT862153	hsa-miR-302c	CLIP-seq
MIRT862154	hsa-miR-302d	CLIP-seq
MIRT862155	hsa-miR-302e	CLIP-seq
MIRT862156	hsa-miR-3132	CLIP-seq
MIRT1556128	hsa-miR-3138	CLIP-seq
MIRT1955774	hsa-miR-3150a-3p	CLIP-seq
MIRT862157	hsa-miR-3175	CLIP-seq
MIRT862222	hsa-miR-3179	CLIP-seq
MIRT862160	hsa-miR-3612	CLIP-seq
MIRT862161	hsa-miR-3622b-5p	CLIP-seq
MIRT862162	hsa-miR-3650	CLIP-seq
MIRT862163	hsa-miR-372	CLIP-seq
MIRT862164	hsa-miR-373	CLIP-seq
MIRT862225	hsa-miR-3918	CLIP-seq
MIRT862165	hsa-miR-3944-5p	CLIP-seq
MIRT862166	hsa-miR-4253	CLIP-seq
MIRT862169	hsa-miR-4443	CLIP-seq
MIRT862170	hsa-miR-4453	CLIP-seq
MIRT862171	hsa-miR-4455	CLIP-seq
MIRT862228	hsa-miR-4456	CLIP-seq
MIRT862172	hsa-miR-4457	CLIP-seq
MIRT862174	hsa-miR-4471	CLIP-seq
MIRT862175	hsa-miR-4481	CLIP-seq
MIRT862229	hsa-miR-4512	CLIP-seq
MIRT862177	hsa-miR-4514	CLIP-seq
MIRT1556129	hsa-miR-4520a-3p	CLIP-seq
MIRT862178	hsa-miR-4538	CLIP-seq
MIRT862179	hsa-miR-4633-3p	CLIP-seq
MIRT862180	hsa-miR-4645-5p	CLIP-seq
MIRT862181	hsa-miR-4673	CLIP-seq
MIRT862230	hsa-miR-4685-5p	CLIP-seq
MIRT862183	hsa-miR-4692	CLIP-seq
MIRT862184	hsa-miR-4716-3p	CLIP-seq
MIRT862186	hsa-miR-4745-5p	CLIP-seq
MIRT862232	hsa-miR-4755-3p	CLIP-seq
MIRT862187	hsa-miR-4763-3p	CLIP-seq
MIRT862189	hsa-miR-4788	CLIP-seq
MIRT862190	hsa-miR-4802-5p	CLIP-seq
MIRT862193	hsa-miR-508-5p	CLIP-seq
MIRT862194	hsa-miR-513b	CLIP-seq
MIRT862195	hsa-miR-516b	CLIP-seq
MIRT862196	hsa-miR-520a-3p	CLIP-seq
MIRT862197	hsa-miR-520b	CLIP-seq
MIRT862198	hsa-miR-520c-3p	CLIP-seq
MIRT862199	hsa-miR-520d-3p	CLIP-seq
MIRT862200	hsa-miR-520e	CLIP-seq
MIRT1556130	hsa-miR-541	CLIP-seq
MIRT862203	hsa-miR-564	CLIP-seq
MIRT862205	hsa-miR-609	CLIP-seq
MIRT862206	hsa-miR-625	CLIP-seq
MIRT862238	hsa-miR-645	CLIP-seq
MIRT862207	hsa-miR-650	CLIP-seq
MIRT1556131	hsa-miR-654-5p	CLIP-seq
MIRT862208	hsa-miR-661	CLIP-seq
MIRT1955778	hsa-miR-676	CLIP-seq
MIRT1955779	hsa-miR-939	CLIP-seq
MIRT862210	hsa-miR-940	CLIP-seq
MIRT862241	hsa-miR-96	CLIP-seq

Show/Hide all (1)

Transcription factor	Regulation	Reference
NRF1	Activation	18234454

Show/Hide all (20)

GO ID	Ontology	Definition	Evidence	Reference
GO:0004198	Function	Calcium-dependent cysteine-type endopeptidase activity	IDA	17646163
GO:0004198	Function	Calcium-dependent cysteine-type endopeptidase activity	IEA
GO:0004198	Function	Calcium-dependent cysteine-type endopeptidase activity	TAS	8702541
GO:0005509	Function	Calcium ion binding	IEA
GO:0005515	Function	Protein binding	IPI	10639123, 18519038, 18761085, 25416956, 27173435, 28319173, 33961781
GO:0005737	Component	Cytoplasm	IEA
GO:0005829	Component	Cytosol	IDA	14559243
GO:0005829	Component	Cytosol	TAS
GO:0005886	Component	Plasma membrane	IEA
GO:0005886	Component	Plasma membrane	TAS
GO:0006508	Process	Proteolysis	NAS	16411745, 28319173
GO:0008284	Process	Positive regulation of cell population proliferation	TAS	8702541
GO:0016020	Component	Membrane	IDA	14559243
GO:0016020	Component	Membrane	IEA
GO:0016241	Process	Regulation of macroautophagy	NAS	17264674
GO:0046872	Function	Metal ion binding	IEA
GO:0070062	Component	Extracellular exosome	HDA	19199708
GO:0110158	Component	Calpain complex	IBA
GO:0110158	Component	Calpain complex	IPI	10639123
GO:0110158	Component	Calpain complex	ISS

MIM	HGNC	e!Ensembl
114170	1481	ENSG00000126247

P04632

Protein name

Calpain small subunit 1 (CSS1) (Calcium-activated neutral proteinase small subunit) (CANP small subunit) (Calcium-dependent protease small subunit) (CDPS) (Calcium-dependent protease small subunit 1) (Calpain regulatory subunit)

Protein function

Regulatory subunit of the calcium-regulated non-lysosomal thiol-protease which catalyzes limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction. Essential for embryonic development (By similarity). {ECO:000

PDB

1KFU , 1KFX , 4PHJ , 4PHK , 4PHM , 4WQ2 , 4WQ3 , 5D69 , 6QLB

Family and domains

Sequence

MFLVNSFLKGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMR
ILGGVISAISEAAAQYNPEPPPPRTHYSNIEANESEEVRQFRRLFAQLAGDDMEVSATEL
MNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKRWQAIYKQ
FDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSDESGNMDFDNFISCLVRLDAMF
RAFKSLDKDGTGQIQVNIQEWLQLTMYS

Sequence length

268

Interactions

View interactions

	KEGG		Reactome
	Shigellosis		Degradation of the extracellular matrix Formation of the cornified envelope Deregulated CDK5 triggers multiple neurodegenerative pathways in Alzheimer's disease models

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Causal Diseases (1)

Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession	Evidence Score
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Pulmonary hypertension, primary, 6	Pathogenic	rs760597333, rs748860589	RCV003991192 RCV003991193	★★★★★ ★★★★☆ ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)

Show/Hide Unknown Diseases (1)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
PROSTATIC NEOPLASMS	—	CTD	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (43)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Alzheimer Disease	Alzheimer disease	Pubtator	37418137	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Breast Carcinoma	Breast Carcinoma	BEFREE	22377768		★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinogenesis	Carcinogenesis	Pubtator	24628706	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma Hepatocellular	Hepatocellular carcinoma	Pubtator	22355367, 23349941, 36233276, 39207047	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma of lung	Lung carcinoma	BEFREE	25636510		★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma Ovarian Epithelial	Epithelial ovarian carcinoma	Pubtator	28535511, 33760208	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma Renal Cell	Renal cell carcinoma	Pubtator	24514433	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Carcinoma, Ovarian Epithelial	Ovarian Epithelial carcinoma	BEFREE	28535511, 29344277		★★★★★ ★☆☆☆☆ Found in Text Mining only
Cholangiocarcinoma	Cholangiocarcinoma	Pubtator	23349941	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Colorectal Carcinoma	Colorectal Cancer	BEFREE	29331389, 29331762		★★★★★ ★☆☆☆☆ Found in Text Mining only
Conventional (Clear Cell) Renal Cell Carcinoma	Renal Carcinoma	BEFREE	24514433, 29648579, 30452399		★★★★★ ★☆☆☆☆ Found in Text Mining only
Coronary Disease	Coronary artery disease	Pubtator	33964876	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Glioblastoma	Glioblastoma	BEFREE	24628706		★★★★★ ★☆☆☆☆ Found in Text Mining only
Glioblastoma	Glioblastoma	Pubtator	24628706	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Glioblastoma Multiforme	Glioblastoma	BEFREE	24628706, 26530859		★★★★★ ★☆☆☆☆ Found in Text Mining only
Glioma	Glioma	BEFREE	24628706		★★★★★ ★☆☆☆☆ Found in Text Mining only
Glioma	Glioma	Pubtator	24628706	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Hepatitis B	Hepatitis b	Pubtator	39207047	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Intrahepatic Cholangiocarcinoma	Intrahepatic Cholangiocarcinoma	BEFREE	23349941		★★★★★ ★☆☆☆☆ Found in Text Mining only
Liver carcinoma	Liver carcinoma	BEFREE	19053044, 23349941		★★★★★ ★☆☆☆☆ Found in Text Mining only
Liver Cirrhosis	Liver cirrhosis	Pubtator	39207047	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Lymphatic Metastasis	Lymphatic metastasis	Pubtator	23349941	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of breast	Breast Cancer	BEFREE	22377768		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of lung	Lung Cancer	BEFREE	25636510		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of ovary	Ovarian cancer	BEFREE	28535511, 29344277		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of prostate	Prostate cancer	CTD_human_DG	17013881		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of prostate	Prostate cancer	BEFREE	26302712, 30241050		★★★★★ ★☆☆☆☆ Found in Text Mining only
Malignant Neoplasms	Malignant Neoplasm	BEFREE	24628706, 28535511, 29331762, 29648579, 30444080		★★★★★ ★☆☆☆☆ Found in Text Mining only
Mammary Neoplasms	Mammary Neoplasms	BEFREE	25304384		★★★★★ ★☆☆☆☆ Found in Text Mining only
Muscular Dystrophy, Duchenne	Duchenne Muscular Dystrophy	BEFREE	8088891		★★★★★ ★☆☆☆☆ Found in Text Mining only
Nasopharyngeal carcinoma	Nasopharyngeal Carcinoma	BEFREE	24703594, 28579809, 28857668, 31691433		★★★★★ ★☆☆☆☆ Found in Text Mining only
Nasopharyngeal Carcinoma	Nasopharyngeal carcinoma	Pubtator	28857668, 31691433, 36354184	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Neoplasms	Neoplasms	BEFREE	23349941, 24514433, 24703594, 25636510, 27878263, 29331762, 29344277, 30241050		★★★★★ ★☆☆☆☆ Found in Text Mining only
Non-Small Cell Lung Carcinoma	Lung carcinoma	BEFREE	25636510		★★★★★ ★☆☆☆☆ Found in Text Mining only
Obesity	Obesity	BEFREE	22969001		★★★★★ ★☆☆☆☆ Found in Text Mining only
ovarian neoplasm	Ovarian neoplasm	BEFREE	28535511, 29344277		★★★★★ ★☆☆☆☆ Found in Text Mining only
Ovarian Neoplasms	Ovarian neoplasm	Pubtator	30448882	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Prostate carcinoma	Prostate cancer	BEFREE	26302712, 30241050		★★★★★ ★☆☆☆☆ Found in Text Mining only
Prostatic Neoplasms	Prostatic Neoplasms	CTD_human_DG	17013881		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Prostatic Neoplasms	Prostatic neoplasm	Pubtator	30241050	Associate	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Schizophrenia	Schizophrenia	Pubtator	28117656	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Squamous cell carcinoma of esophagus	Esophagus Neoplasm	BEFREE	30444080		★★★★★ ★☆☆☆☆ Found in Text Mining only
Stomach Neoplasms	Stomach neoplasms	Pubtator	27994509	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only

CAPNS1 (calpain small subunit 1)