TRIM56 (tripartite motif containing 56)

Gene

• Entrez ID: 81844
• Gene name: Tripartite motif containing 56
• Gene symbol: TRIM56
• Synonyms (NCBI Gene): RNF109
• Chromosome: 7
• Chromosome location: 7q22.1

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	23824327
MIRT611467	hsa-miR-1273f	HITS-CLIP	23824327
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	23824327
MIRT611467	hsa-miR-1273f	HITS-CLIP	23824327
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	23824327
MIRT611467	hsa-miR-1273f	HITS-CLIP	23824327
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	23824327
MIRT611467	hsa-miR-1273f	HITS-CLIP	23824327
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	23824327
MIRT611467	hsa-miR-1273f	HITS-CLIP	23824327
MIRT530670	hsa-miR-8084	PAR-CLIP	22012620
MIRT530669	hsa-miR-200b-3p	PAR-CLIP	22012620
MIRT530668	hsa-miR-200c-3p	PAR-CLIP	22012620
MIRT530667	hsa-miR-429	PAR-CLIP	22012620
MIRT530666	hsa-miR-3929	PAR-CLIP	22012620
MIRT530665	hsa-miR-4419b	PAR-CLIP	22012620
MIRT530664	hsa-miR-4478	PAR-CLIP	22012620
MIRT530663	hsa-miR-4251	PAR-CLIP	22012620
MIRT530662	hsa-miR-1253	PAR-CLIP	22012620
MIRT530661	hsa-miR-6770-5p	PAR-CLIP	22012620
MIRT530660	hsa-miR-4534	PAR-CLIP	22012620
MIRT530659	hsa-miR-8082	PAR-CLIP	22012620
MIRT530658	hsa-miR-4434	PAR-CLIP	22012620
MIRT530657	hsa-miR-4516	PAR-CLIP	22012620
MIRT530656	hsa-miR-5703	PAR-CLIP	22012620
MIRT530655	hsa-miR-374c-5p	PAR-CLIP	22012620
MIRT530654	hsa-miR-655-3p	PAR-CLIP	22012620
MIRT530653	hsa-miR-4662a-5p	PAR-CLIP	22012620
MIRT530652	hsa-miR-4531	PAR-CLIP	22012620
MIRT496909	hsa-miR-495-5p	PAR-CLIP	22291592
MIRT496908	hsa-miR-4716-5p	PAR-CLIP	22291592
MIRT496907	hsa-miR-5189-3p	PAR-CLIP	22291592
MIRT496906	hsa-miR-6501-5p	PAR-CLIP	22291592
MIRT496905	hsa-miR-192-3p	PAR-CLIP	22291592
MIRT496904	hsa-miR-653-5p	PAR-CLIP	22291592
MIRT496903	hsa-miR-6793-3p	PAR-CLIP	22291592
MIRT611467	hsa-miR-1273f	HITS-CLIP	27418678
MIRT611467	hsa-miR-1273f	HITS-CLIP	27418678
MIRT611467	hsa-miR-1273f	HITS-CLIP	27418678
MIRT611467	hsa-miR-1273f	HITS-CLIP	27418678
MIRT611467	hsa-miR-1273f	HITS-CLIP	27418678
MIRT611467	hsa-miR-1273f	HITS-CLIP	27418678
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	27418678
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	27418678
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	27418678
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	23824327
MIRT611467	hsa-miR-1273f	HITS-CLIP	23824327
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	23824327
MIRT611467	hsa-miR-1273f	HITS-CLIP	23824327
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	23824327
MIRT611467	hsa-miR-1273f	HITS-CLIP	23824327
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	23824327
MIRT611467	hsa-miR-1273f	HITS-CLIP	23824327
MIRT611468	hsa-miR-6890-5p	HITS-CLIP	23824327
MIRT611467	hsa-miR-1273f	HITS-CLIP	23824327
MIRT530670	hsa-miR-8084	PAR-CLIP	22012620
MIRT530669	hsa-miR-200b-3p	PAR-CLIP	22012620
MIRT530668	hsa-miR-200c-3p	PAR-CLIP	22012620
MIRT530667	hsa-miR-429	PAR-CLIP	22012620
MIRT530666	hsa-miR-3929	PAR-CLIP	22012620
MIRT530665	hsa-miR-4419b	PAR-CLIP	22012620
MIRT530664	hsa-miR-4478	PAR-CLIP	22012620
MIRT530663	hsa-miR-4251	PAR-CLIP	22012620
MIRT530662	hsa-miR-1253	PAR-CLIP	22012620
MIRT530661	hsa-miR-6770-5p	PAR-CLIP	22012620
MIRT530660	hsa-miR-4534	PAR-CLIP	22012620
MIRT530659	hsa-miR-8082	PAR-CLIP	22012620
MIRT530658	hsa-miR-4434	PAR-CLIP	22012620
MIRT530657	hsa-miR-4516	PAR-CLIP	22012620
MIRT530656	hsa-miR-5703	PAR-CLIP	22012620
MIRT530655	hsa-miR-374c-5p	PAR-CLIP	22012620
MIRT530654	hsa-miR-655-3p	PAR-CLIP	22012620
MIRT530653	hsa-miR-4662a-5p	PAR-CLIP	22012620
MIRT530652	hsa-miR-4531	PAR-CLIP	22012620
MIRT496909	hsa-miR-495-5p	PAR-CLIP	22291592
MIRT496908	hsa-miR-4716-5p	PAR-CLIP	22291592
MIRT496907	hsa-miR-5189-3p	PAR-CLIP	22291592
MIRT496906	hsa-miR-6501-5p	PAR-CLIP	22291592
MIRT496905	hsa-miR-192-3p	PAR-CLIP	22291592
MIRT496904	hsa-miR-653-5p	PAR-CLIP	22291592
MIRT496903	hsa-miR-6793-3p	PAR-CLIP	22291592
MIRT1455183	hsa-miR-1271	CLIP-seq
MIRT1455184	hsa-miR-1286	CLIP-seq
MIRT1455185	hsa-miR-1470	CLIP-seq
MIRT1455186	hsa-miR-15a	CLIP-seq
MIRT1455187	hsa-miR-15b	CLIP-seq
MIRT1455188	hsa-miR-16	CLIP-seq
MIRT1455189	hsa-miR-182	CLIP-seq
MIRT1455190	hsa-miR-195	CLIP-seq
MIRT1455191	hsa-miR-200b	CLIP-seq
MIRT1455192	hsa-miR-200c	CLIP-seq
MIRT1455193	hsa-miR-2052	CLIP-seq
MIRT1455194	hsa-miR-3155	CLIP-seq
MIRT1455195	hsa-miR-3155b	CLIP-seq
MIRT1455196	hsa-miR-3185	CLIP-seq
MIRT1455197	hsa-miR-328	CLIP-seq
MIRT1455198	hsa-miR-330-3p	CLIP-seq
MIRT1455199	hsa-miR-3591-3p	CLIP-seq
MIRT1455200	hsa-miR-3663-5p	CLIP-seq
MIRT1455201	hsa-miR-3674	CLIP-seq
MIRT1455202	hsa-miR-371-5p	CLIP-seq
MIRT1455203	hsa-miR-371b-5p	CLIP-seq
MIRT1455204	hsa-miR-374c	CLIP-seq
MIRT1455205	hsa-miR-3960	CLIP-seq
MIRT1455206	hsa-miR-424	CLIP-seq
MIRT1455207	hsa-miR-4274	CLIP-seq
MIRT1455208	hsa-miR-4284	CLIP-seq
MIRT1455209	hsa-miR-4286	CLIP-seq
MIRT1455210	hsa-miR-4287	CLIP-seq
MIRT1455211	hsa-miR-4290	CLIP-seq
MIRT1455212	hsa-miR-4423-5p	CLIP-seq
MIRT1455213	hsa-miR-4436a	CLIP-seq
MIRT1455214	hsa-miR-4438	CLIP-seq
MIRT1455215	hsa-miR-4469	CLIP-seq
MIRT1455216	hsa-miR-4519	CLIP-seq
MIRT1455217	hsa-miR-4524	CLIP-seq
MIRT1455218	hsa-miR-4667-3p	CLIP-seq
MIRT1455219	hsa-miR-4685-3p	CLIP-seq
MIRT1455220	hsa-miR-4709-3p	CLIP-seq
MIRT1455221	hsa-miR-4719	CLIP-seq
MIRT1455222	hsa-miR-4732-5p	CLIP-seq
MIRT1455223	hsa-miR-4781-3p	CLIP-seq
MIRT1455224	hsa-miR-4790-3p	CLIP-seq
MIRT1455225	hsa-miR-483-5p	CLIP-seq
MIRT1455226	hsa-miR-484	CLIP-seq
MIRT1455227	hsa-miR-497	CLIP-seq
MIRT1455228	hsa-miR-503	CLIP-seq
MIRT1455229	hsa-miR-518a-5p	CLIP-seq
MIRT1455230	hsa-miR-527	CLIP-seq
MIRT1455231	hsa-miR-642a	CLIP-seq
MIRT1455232	hsa-miR-646	CLIP-seq
MIRT1455233	hsa-miR-655	CLIP-seq
MIRT1455234	hsa-miR-720	CLIP-seq
MIRT1455235	hsa-miR-885-3p	CLIP-seq
MIRT1455236	hsa-miR-9	CLIP-seq
MIRT1455237	hsa-miR-96	CLIP-seq
MIRT1455212	hsa-miR-4423-5p	CLIP-seq
MIRT1455223	hsa-miR-4781-3p	CLIP-seq
MIRT1455234	hsa-miR-720	CLIP-seq
MIRT1455212	hsa-miR-4423-5p	CLIP-seq
MIRT1455223	hsa-miR-4781-3p	CLIP-seq
MIRT1455234	hsa-miR-720	CLIP-seq
MIRT2136396	hsa-miR-103b	CLIP-seq
MIRT2136397	hsa-miR-106a	CLIP-seq
MIRT2136398	hsa-miR-106b	CLIP-seq
MIRT2136399	hsa-miR-10a	CLIP-seq
MIRT2136400	hsa-miR-10b	CLIP-seq
MIRT2136401	hsa-miR-1200	CLIP-seq
MIRT2136402	hsa-miR-1224-3p	CLIP-seq
MIRT2136403	hsa-miR-1234	CLIP-seq
MIRT2136404	hsa-miR-1260	CLIP-seq
MIRT2136405	hsa-miR-1260b	CLIP-seq
MIRT1455183	hsa-miR-1271	CLIP-seq
MIRT2136406	hsa-miR-128	CLIP-seq
MIRT2136407	hsa-miR-1280	CLIP-seq
MIRT2136408	hsa-miR-1290	CLIP-seq
MIRT2136409	hsa-miR-148a	CLIP-seq
MIRT2136410	hsa-miR-148b	CLIP-seq
MIRT2136411	hsa-miR-150	CLIP-seq
MIRT2136412	hsa-miR-152	CLIP-seq
MIRT2136413	hsa-miR-17	CLIP-seq
MIRT1455189	hsa-miR-182	CLIP-seq
MIRT2136414	hsa-miR-1976	CLIP-seq
MIRT2136415	hsa-miR-20a	CLIP-seq
MIRT2136416	hsa-miR-20b	CLIP-seq
MIRT2136417	hsa-miR-2276	CLIP-seq
MIRT2136418	hsa-miR-3064-3p	CLIP-seq
MIRT2136419	hsa-miR-3146	CLIP-seq
MIRT2136420	hsa-miR-3158-5p	CLIP-seq
MIRT2136421	hsa-miR-3166	CLIP-seq
MIRT2136422	hsa-miR-3167	CLIP-seq
MIRT2136423	hsa-miR-345	CLIP-seq
MIRT2136424	hsa-miR-3620	CLIP-seq
MIRT1455200	hsa-miR-3663-5p	CLIP-seq
MIRT2136425	hsa-miR-3664-5p	CLIP-seq
MIRT1455201	hsa-miR-3674	CLIP-seq
MIRT2136426	hsa-miR-3678-3p	CLIP-seq
MIRT2136427	hsa-miR-3691-5p	CLIP-seq
MIRT2136428	hsa-miR-3692	CLIP-seq
MIRT2136429	hsa-miR-371-3p	CLIP-seq
MIRT1455202	hsa-miR-371-5p	CLIP-seq
MIRT1455203	hsa-miR-371b-5p	CLIP-seq
MIRT2136430	hsa-miR-377	CLIP-seq
MIRT2136431	hsa-miR-3909	CLIP-seq
MIRT2136432	hsa-miR-3910	CLIP-seq
MIRT1455207	hsa-miR-4274	CLIP-seq
MIRT1455210	hsa-miR-4287	CLIP-seq
MIRT2136433	hsa-miR-4324	CLIP-seq
MIRT2136434	hsa-miR-4418	CLIP-seq
MIRT1455212	hsa-miR-4423-5p	CLIP-seq
MIRT2136435	hsa-miR-4432	CLIP-seq
MIRT2136436	hsa-miR-4452	CLIP-seq
MIRT1455215	hsa-miR-4469	CLIP-seq
MIRT2136437	hsa-miR-4491	CLIP-seq
MIRT1455216	hsa-miR-4519	CLIP-seq
MIRT2136438	hsa-miR-4520b-3p	CLIP-seq
MIRT2136439	hsa-miR-4522	CLIP-seq
MIRT1455217	hsa-miR-4524	CLIP-seq
MIRT2136440	hsa-miR-4525	CLIP-seq
MIRT2136441	hsa-miR-4529-3p	CLIP-seq
MIRT2136442	hsa-miR-4638-5p	CLIP-seq
MIRT2136443	hsa-miR-4650-5p	CLIP-seq
MIRT2136444	hsa-miR-4655-3p	CLIP-seq
MIRT2136445	hsa-miR-4657	CLIP-seq
MIRT1455218	hsa-miR-4667-3p	CLIP-seq
MIRT1455219	hsa-miR-4685-3p	CLIP-seq
MIRT2136446	hsa-miR-4704-5p	CLIP-seq
MIRT2136447	hsa-miR-4713-3p	CLIP-seq
MIRT2136448	hsa-miR-4722-3p	CLIP-seq
MIRT1455222	hsa-miR-4732-5p	CLIP-seq
MIRT2136449	hsa-miR-4752	CLIP-seq
MIRT2136450	hsa-miR-4771	CLIP-seq
MIRT2136451	hsa-miR-4778-5p	CLIP-seq
MIRT1455223	hsa-miR-4781-3p	CLIP-seq
MIRT2136452	hsa-miR-4804-5p	CLIP-seq
MIRT1455225	hsa-miR-483-5p	CLIP-seq
MIRT2136453	hsa-miR-486-5p	CLIP-seq
MIRT2136454	hsa-miR-488	CLIP-seq
MIRT2136455	hsa-miR-509-3-5p	CLIP-seq
MIRT2136456	hsa-miR-509-5p	CLIP-seq
MIRT2136457	hsa-miR-519d	CLIP-seq
MIRT2136458	hsa-miR-520g	CLIP-seq
MIRT2136459	hsa-miR-520h	CLIP-seq
MIRT2136460	hsa-miR-532-3p	CLIP-seq
MIRT2136461	hsa-miR-544b	CLIP-seq
MIRT2136462	hsa-miR-548an	CLIP-seq
MIRT2136463	hsa-miR-603	CLIP-seq
MIRT2136464	hsa-miR-653	CLIP-seq
MIRT1455234	hsa-miR-720	CLIP-seq
MIRT2136465	hsa-miR-873	CLIP-seq
MIRT2136466	hsa-miR-876-5p	CLIP-seq
MIRT2136467	hsa-miR-888	CLIP-seq
MIRT2136468	hsa-miR-93	CLIP-seq
MIRT1455237	hsa-miR-96	CLIP-seq
MIRT2136396	hsa-miR-103b	CLIP-seq
MIRT2136399	hsa-miR-10a	CLIP-seq
MIRT2136400	hsa-miR-10b	CLIP-seq
MIRT2136402	hsa-miR-1224-3p	CLIP-seq
MIRT2357307	hsa-miR-1229	CLIP-seq
MIRT2136414	hsa-miR-1976	CLIP-seq
MIRT2136417	hsa-miR-2276	CLIP-seq
MIRT2357308	hsa-miR-3130-3p	CLIP-seq
MIRT2136420	hsa-miR-3158-5p	CLIP-seq
MIRT2136421	hsa-miR-3166	CLIP-seq
MIRT2357309	hsa-miR-342-3p	CLIP-seq
MIRT2136424	hsa-miR-3620	CLIP-seq
MIRT2357310	hsa-miR-3652	CLIP-seq
MIRT1455200	hsa-miR-3663-5p	CLIP-seq
MIRT1455201	hsa-miR-3674	CLIP-seq
MIRT2136426	hsa-miR-3678-3p	CLIP-seq
MIRT1455202	hsa-miR-371-5p	CLIP-seq
MIRT1455203	hsa-miR-371b-5p	CLIP-seq
MIRT2136430	hsa-miR-377	CLIP-seq
MIRT1455207	hsa-miR-4274	CLIP-seq
MIRT2357311	hsa-miR-4325	CLIP-seq
MIRT2136434	hsa-miR-4418	CLIP-seq
MIRT1455212	hsa-miR-4423-5p	CLIP-seq
MIRT2357312	hsa-miR-4424	CLIP-seq
MIRT2357313	hsa-miR-4430	CLIP-seq
MIRT2357314	hsa-miR-4466	CLIP-seq
MIRT2357315	hsa-miR-4474-3p	CLIP-seq
MIRT2357316	hsa-miR-4505	CLIP-seq
MIRT1455216	hsa-miR-4519	CLIP-seq
MIRT1455217	hsa-miR-4524	CLIP-seq
MIRT2136440	hsa-miR-4525	CLIP-seq
MIRT2136442	hsa-miR-4638-5p	CLIP-seq
MIRT1455218	hsa-miR-4667-3p	CLIP-seq
MIRT2357317	hsa-miR-4680-5p	CLIP-seq
MIRT2136446	hsa-miR-4704-5p	CLIP-seq
MIRT2136448	hsa-miR-4722-3p	CLIP-seq
MIRT1455222	hsa-miR-4732-5p	CLIP-seq
MIRT2136450	hsa-miR-4771	CLIP-seq
MIRT1455223	hsa-miR-4781-3p	CLIP-seq
MIRT2357318	hsa-miR-4793-3p	CLIP-seq
MIRT2357319	hsa-miR-4793-5p	CLIP-seq
MIRT1455225	hsa-miR-483-5p	CLIP-seq
MIRT2136453	hsa-miR-486-5p	CLIP-seq
MIRT2136455	hsa-miR-509-3-5p	CLIP-seq
MIRT2136456	hsa-miR-509-5p	CLIP-seq
MIRT2136460	hsa-miR-532-3p	CLIP-seq
MIRT2136463	hsa-miR-603	CLIP-seq
MIRT2357320	hsa-miR-675	CLIP-seq
MIRT1455234	hsa-miR-720	CLIP-seq
MIRT2136467	hsa-miR-888	CLIP-seq
MIRT1455185	hsa-miR-1470	CLIP-seq
MIRT2396368	hsa-miR-3074-5p	CLIP-seq
MIRT2396369	hsa-miR-3137	CLIP-seq
MIRT2136423	hsa-miR-345	CLIP-seq
MIRT1455200	hsa-miR-3663-5p	CLIP-seq
MIRT2136425	hsa-miR-3664-5p	CLIP-seq
MIRT1455201	hsa-miR-3674	CLIP-seq
MIRT1455209	hsa-miR-4286	CLIP-seq
MIRT1455210	hsa-miR-4287	CLIP-seq
MIRT1455211	hsa-miR-4290	CLIP-seq
MIRT1455212	hsa-miR-4423-5p	CLIP-seq
MIRT1455215	hsa-miR-4469	CLIP-seq
MIRT2136439	hsa-miR-4522	CLIP-seq
MIRT2136442	hsa-miR-4638-5p	CLIP-seq
MIRT2136443	hsa-miR-4650-5p	CLIP-seq
MIRT1455218	hsa-miR-4667-3p	CLIP-seq
MIRT1455219	hsa-miR-4685-3p	CLIP-seq
MIRT2136447	hsa-miR-4713-3p	CLIP-seq
MIRT2136448	hsa-miR-4722-3p	CLIP-seq
MIRT1455222	hsa-miR-4732-5p	CLIP-seq
MIRT1455223	hsa-miR-4781-3p	CLIP-seq
MIRT1455234	hsa-miR-720	CLIP-seq
MIRT2136430	hsa-miR-377	CLIP-seq
MIRT1455207	hsa-miR-4274	CLIP-seq
MIRT1455216	hsa-miR-4519	CLIP-seq
MIRT1455217	hsa-miR-4524	CLIP-seq
MIRT2136446	hsa-miR-4704-5p	CLIP-seq
MIRT1455225	hsa-miR-483-5p	CLIP-seq
MIRT2136463	hsa-miR-603	CLIP-seq
MIRT2136397	hsa-miR-106a	CLIP-seq
MIRT2136398	hsa-miR-106b	CLIP-seq
MIRT2136401	hsa-miR-1200	CLIP-seq
MIRT2136402	hsa-miR-1224-3p	CLIP-seq
MIRT2136404	hsa-miR-1260	CLIP-seq
MIRT2136405	hsa-miR-1260b	CLIP-seq
MIRT2136407	hsa-miR-1280	CLIP-seq
MIRT2136411	hsa-miR-150	CLIP-seq
MIRT2136413	hsa-miR-17	CLIP-seq
MIRT2136415	hsa-miR-20a	CLIP-seq
MIRT2136416	hsa-miR-20b	CLIP-seq
MIRT2136418	hsa-miR-3064-3p	CLIP-seq
MIRT2136419	hsa-miR-3146	CLIP-seq
MIRT1455197	hsa-miR-328	CLIP-seq
MIRT1455199	hsa-miR-3591-3p	CLIP-seq
MIRT2136429	hsa-miR-371-3p	CLIP-seq
MIRT2136432	hsa-miR-3910	CLIP-seq
MIRT2651046	hsa-miR-4252	CLIP-seq
MIRT2136433	hsa-miR-4324	CLIP-seq
MIRT2136442	hsa-miR-4638-5p	CLIP-seq
MIRT2136447	hsa-miR-4713-3p	CLIP-seq
MIRT2136454	hsa-miR-488	CLIP-seq
MIRT2136457	hsa-miR-519d	CLIP-seq
MIRT2136458	hsa-miR-520g	CLIP-seq
MIRT2136459	hsa-miR-520h	CLIP-seq
MIRT2136460	hsa-miR-532-3p	CLIP-seq
MIRT2136461	hsa-miR-544b	CLIP-seq
MIRT2136462	hsa-miR-548an	CLIP-seq
MIRT2651047	hsa-miR-626	CLIP-seq
MIRT1455236	hsa-miR-9	CLIP-seq
MIRT2136468	hsa-miR-93	CLIP-seq
MIRT2136397	hsa-miR-106a	CLIP-seq
MIRT2136398	hsa-miR-106b	CLIP-seq
MIRT2136411	hsa-miR-150	CLIP-seq
MIRT2136413	hsa-miR-17	CLIP-seq
MIRT2136414	hsa-miR-1976	CLIP-seq
MIRT2136415	hsa-miR-20a	CLIP-seq
MIRT2136416	hsa-miR-20b	CLIP-seq
MIRT2136418	hsa-miR-3064-3p	CLIP-seq
MIRT2694180	hsa-miR-3120-5p	CLIP-seq
MIRT2357308	hsa-miR-3130-3p	CLIP-seq
MIRT2136421	hsa-miR-3166	CLIP-seq
MIRT1455197	hsa-miR-328	CLIP-seq
MIRT2694181	hsa-miR-346	CLIP-seq
MIRT1455199	hsa-miR-3591-3p	CLIP-seq
MIRT2136426	hsa-miR-3678-3p	CLIP-seq
MIRT2136429	hsa-miR-371-3p	CLIP-seq
MIRT2694182	hsa-miR-4288	CLIP-seq
MIRT2357311	hsa-miR-4325	CLIP-seq
MIRT1455218	hsa-miR-4667-3p	CLIP-seq
MIRT2136450	hsa-miR-4771	CLIP-seq
MIRT2357318	hsa-miR-4793-3p	CLIP-seq
MIRT2136457	hsa-miR-519d	CLIP-seq
MIRT2136458	hsa-miR-520g	CLIP-seq
MIRT2136459	hsa-miR-520h	CLIP-seq
MIRT2651047	hsa-miR-626	CLIP-seq
MIRT2694183	hsa-miR-632	CLIP-seq
MIRT1455236	hsa-miR-9	CLIP-seq
MIRT2136468	hsa-miR-93	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0002376	Process	Immune system process	IEA
GO:0003723	Function	RNA binding	HDA	22658674, 22681889
GO:0004842	Function	Ubiquitin-protein transferase activity	TAS
GO:0005515	Function	Protein binding	IPI	22948160
GO:0005654	Component	Nucleoplasm	IBA
GO:0005737	Component	Cytoplasm	IEA
GO:0005737	Component	Cytoplasm	ISS
GO:0005829	Component	Cytosol	TAS
GO:0006513	Process	Protein monoubiquitination	IDA	29426904
GO:0006513	Process	Protein monoubiquitination	IEA
GO:0008270	Function	Zinc ion binding	IEA
GO:0016567	Process	Protein ubiquitination	IEA
GO:0016740	Function	Transferase activity	IEA
GO:0032479	Process	Regulation of type I interferon production	IEA
GO:0032479	Process	Regulation of type I interferon production	TAS
GO:0032728	Process	Positive regulation of interferon-beta production	ISS
GO:0034340	Process	Response to type I interferon	ISS
GO:0045087	Process	Innate immune response	IBA
GO:0045087	Process	Innate immune response	IEA
GO:0045089	Process	Positive regulation of innate immune response	IDA	29426904
GO:0046872	Function	Metal ion binding	IEA
GO:0051607	Process	Defense response to virus	IDA	29426904
GO:0051607	Process	Defense response to virus	IEA
GO:0051607	Process	Defense response to virus	ISS
GO:0060340	Process	Positive regulation of type I interferon-mediated signaling pathway	IBA
GO:0060340	Process	Positive regulation of type I interferon-mediated signaling pathway	IDA	29426904
GO:0060340	Process	Positive regulation of type I interferon-mediated signaling pathway	IEA
GO:0061630	Function	Ubiquitin protein ligase activity	IBA
GO:0061630	Function	Ubiquitin protein ligase activity	IDA	29426904, 35952808
GO:0061630	Function	Ubiquitin protein ligase activity	IEA
GO:0061630	Function	Ubiquitin protein ligase activity	ISS
GO:0070534	Process	Protein K63-linked ubiquitination	ISS
GO:0140896	Process	CGAS/STING signaling pathway	IDA	32911482, 32912999
GO:1901224	Process	Positive regulation of non-canonical NF-kappaB signal transduction	IDA	35952808

Other IDs

• MIM: 616996
• HGNC: 19028
• e!Ensembl: ENSG00000169871

Protein

• UniProt ID: Q9BRZ2
• Protein name: E3 ubiquitin-protein ligase TRIM56 (EC 2.3.2.27) (RING finger protein 109) (Tripartite motif-containing protein 56)
• Protein function: E3 ubiquitin-protein ligase that plays a key role in innate antiviral immunity by mediating ubiquitination of CGAS and STING1 (PubMed:21289118, PubMed:29426904). In response to pathogen- and host-derived double-stranded DNA (dsDNA), targets STIN
• PDB: 5JW7
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF13445	zf-RING_UBOX	21 → 57	RING-type zinc-finger	Domain
  PF00643	zf-B_box	164 → 205	B-box zinc finger	Domain

• Tissue specificity: TISSUE SPECIFICITY: Widely expressed (at protein level). {ECO:0000269|PubMed:21289118}.
• Sequence:

  MVSHGSSPSLLEALSSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQLADGGRVRCPECR
  ETVPVPPEGVASFKTNFFVNGLLDLVKARACGDLRAGKPACALCPLVGGTSTGGPATARC
  LDCADDLCQACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
  CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEGLLAGVDNNLVELEAARRVEKEA
  LARLREQAARVGTQVEEAAEGVLRALLAQKQEVLGQLRAHVEAAEEAARERLAELEGREQ
  VARAAAAFARRVLSLGREAEILSLEGAIAQRLRQLQGCPWAPGPAPCLLPQLELHPGLLD
  KNCHLLRLSFEEQQPQKDGGKDGAGTQGGEESQSRREDEPKTERQGGVQPQAGDGAQTPK
  EEKAQTTREEGAQTLEEDRAQTPHEDGGPQPHRGGRPNKKKKFKGRLKSISREPSPALGP
  NLDGSGLLPRPIFYCSFPTRMPGDKRSPRITGLCPFGPREILVADEQNRALKRFSLNGDY
  KGTVPVPEGCSPCSVAALQSAVAFSASARLYLINPNGEVQWRRALSLSQASHAVAALPSG
  DRVAVSVAGHVEVYNMEGSLATRFIPGGKASRGLRALVFLTTSPQGHFVGSDWQQNSVVI
  CDGLGQVVGEYKGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVILDPKGSLLGDFLTAYH
  GLEKPRVTTMVDGRYLVVSLSNGTIHIFRVRSPDS

• Sequence length: 755

Pathways

Reactome:

Regulation of innate immune responses to cytosolic DNA

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
ALZHEIMER DISEASE	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Breast Carcinoma	Breast Carcinoma	BEFREE	31000690		★☆☆☆☆ Found in Text Mining only
Carcinoma Hepatocellular	Hepatocellular carcinoma	Pubtator	33577026	Associate	★☆☆☆☆ Found in Text Mining only
Carcinoma, Ovarian Epithelial	Ovarian Epithelial carcinoma	BEFREE	28771721, 30281912		★☆☆☆☆ Found in Text Mining only
Glioma	Glioma	Pubtator	36870986	Associate	★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of breast	Breast Cancer	BEFREE	31000690		★☆☆☆☆ Found in Text Mining only
Malignant neoplasm of ovary	Ovarian cancer	BEFREE	28771721, 30281912		★☆☆☆☆ Found in Text Mining only
Malignant Neoplasms	Malignant Neoplasm	BEFREE	21685375		★☆☆☆☆ Found in Text Mining only
Mood swings	Mood swings	BEFREE	30281912		★☆☆☆☆ Found in Text Mining only
Multiple Myeloma	Multiple myeloma	BEFREE	29214775, 30637864		★☆☆☆☆ Found in Text Mining only
Multiple Myeloma	Multiple myeloma	Pubtator	29214775	Inhibit	★☆☆☆☆ Found in Text Mining only
Neoplasms	Neoplasms	BEFREE	29214775		★☆☆☆☆ Found in Text Mining only
Ovarian Carcinoma	Ovarian Carcinoma	BEFREE	28771721		★☆☆☆☆ Found in Text Mining only
ovarian neoplasm	Ovarian neoplasm	BEFREE	28771721, 30281912		★☆☆☆☆ Found in Text Mining only
Peritonitis	Peritonitis	Pubtator	35022662	Associate	★☆☆☆☆ Found in Text Mining only