Gene Gene information from NCBI Gene database.
Entrez ID 81603
Gene name Tripartite motif containing 8
Gene symbol TRIM8
Synonyms (NCBI Gene)
FSGSNEDSGERPRNF27
Chromosome 10
Chromosome location 10q24.32
Summary This gene encodes a member of the tripartite motif (TRIM) protein family. Based on similarities to other proteins, the encoded protein is suspected to be an E3 ubiquitin-protein ligase. Regulation of this gene may be altered in some cancers. Mutations res
miRNA miRNA information provided by mirtarbase database.
157
miRTarBase ID miRNA Experiments Reference
MIRT018878 hsa-miR-335-5p Microarray 18185580
MIRT025917 hsa-miR-7-5p Microarray 19073608
MIRT051030 hsa-miR-17-5p CLASH 23622248
MIRT048914 hsa-miR-93-5p CLASH 23622248
MIRT261132 hsa-miR-656-3p PAR-CLIP 21572407
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
34
GO ID Ontology Definition Evidence Reference
GO:0002376 Process Immune system process IEA
GO:0003713 Function Transcription coactivator activity IDA 23077300
GO:0005515 Function Protein binding IPI 19549727, 32296183, 32814053
GO:0005634 Component Nucleus IEA
GO:0005634 Component Nucleus IMP 33508234
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
606125 15579 ENSG00000171206
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9BZR9
Protein name E3 ubiquitin-protein ligase TRIM8 (EC 2.3.2.27) (Glioblastoma-expressed RING finger protein) (RING finger protein 27) (RING-type E3 ubiquitin transferase TRIM8) (Tripartite motif-containing protein 8)
Protein function E3 ubiquitin-protein ligase that participates in multiple biological processes including cell survival, differentiation, apoptosis, and in particular, the innate immune response (PubMed:27981609, PubMed:28747347). Participates in the activation
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF15227 zf-C3HC4_4 15 55 Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed. Expressed in glomerular podocytes of kidneys. {ECO:0000269|PubMed:33508234, ECO:0000305}.
Sequence
MAENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKDSGLVRCPECNQAYN
QKPGLEKNLKLTNIVEKFNALHVEKPPAALHCVFCRRGPPLPAQKVCLRCEAPCCQSHVQ
THLQQPSTARGHLLVEADDVRAWSCPQHNAYRLYHCEAEQVAVCQYCCYYSGAHQGHSVC
DVEIRRNEIRKMLMKQQDRLEEREQDIEDQLYKLESDKRLVEEKVNQLKEEVRLQYEKLH
QLLDEDLRQTVEVLDKAQAKFCSENAAQALHLGERMQEAKKLLGSLQLLFDKTEDVSFMK
NTKSVKILMDRTQTCTSSSLSPTKIGHLNSKLFLNEVAKKEKQLRKMLEGPFSTPVPFLQ
SVPLYPCGVSSSGAEKRKHSTAFPEASFLETSSGPVGGQYGAAGTASGEGQSGQPLGPCS
STQHLVALPGGAQPVHSSPVFPPSQYPNGSAAQQPMLPQYGGRKILVCSVDNCYCSSVAN
HGGHQPYPRSGHFPWTVPSQEYSHPLPPTPSVPQSLPSLAVRDWLDASQQPGHQDFYRVY
GQPSTKHYVTS
Sequence length 551
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Interferon gamma signaling
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
20
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Focal segmental glomerulosclerosis Likely pathogenic; Pathogenic rs2135985150, rs2135984840, rs2135984949, rs2135985076, rs2135984958, rs1387656757, rs866294686, rs2064030858 RCV001849526
RCV001849527
RCV001849528
RCV001849529
RCV001849831
View all (3 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Focal segmental glomerulosclerosis and neurodevelopmental syndrome Pathogenic; Likely pathogenic rs2135985089, rs1386357224, rs2135984894, rs2135985150, rs2135984840, rs2135984949, rs2135985076, rs2135984958, rs772349788, rs2064030791, rs2492914801, rs2064032086, rs2492916342, rs866294686 RCV001549296
RCV001549297
RCV001549301
RCV001549303
RCV001549305
View all (10 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Neurodevelopmental delay Likely pathogenic; Pathogenic rs2135985150, rs2135984840, rs2135984949, rs2135985076, rs2135984958, rs1387656757, rs866294686, rs2064030858 RCV001849526
RCV001849527
RCV001849528
RCV001849529
RCV001849831
View all (3 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Seizure Likely pathogenic; Pathogenic rs2135985150, rs2135984840, rs2135984949, rs2135985076, rs2135984958, rs1387656757, rs866294686, rs2064030858 RCV001849526
RCV001849527
RCV001849528
RCV001849529
RCV001849831
View all (3 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ANOREXIA NERVOSA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ATTENTION DEFICIT HYPERACTIVITY DISORDER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTISM SPECTRUM DISORDER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BIPOLAR DISORDER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Anaplastic thyroid carcinoma Anaplastic thyroid cancer BEFREE 28280352
★☆☆☆☆
Found in Text Mining only
Arachnodactyly Arachnodactyly CLINVAR_DG
★☆☆☆☆
Found in Text Mining only
Arthritis, Psoriatic Psoriatic Arthritis BEFREE 27995356
★☆☆☆☆
Found in Text Mining only
Asthma Asthma Pubtator 35470728 Associate
★☆☆☆☆
Found in Text Mining only
Asthma Asthma CLINVAR_DG
★☆☆☆☆
Found in Text Mining only
Astigmatism Astigmatism CLINVAR_DG
★☆☆☆☆
Found in Text Mining only
Autistic behavior Autism HPO_DG
★☆☆☆☆
Found in Text Mining only
Bicuspid Aortic Valve Disease Bicuspid aortic valve Pubtator 36071494 Associate
★☆☆☆☆
Found in Text Mining only
Brain Diseases Brain disease Pubtator 34930159 Associate
★☆☆☆☆
Found in Text Mining only
Carcinogenesis Carcinogenesis Pubtator 26077989 Associate
★☆☆☆☆
Found in Text Mining only