Gene Gene information from NCBI Gene database.
Entrez ID 81031
Gene name Solute carrier family 2 member 10
Gene symbol SLC2A10
Synonyms (NCBI Gene)
ATORSATSGLUT10
Chromosome 20
Chromosome location 20q13.12
Summary This gene encodes a member of the class III facilitative glucose transporter family. The encoded protein plays a role in regulation of glucose homeostasis. Mutations in this gene have been associated with arterial tortuosity syndrome.[provided by RefSeq,
SNPs SNP information provided by dbSNP.
36
SNP ID Visualize variation Clinical significance Consequence
rs34295241 G>A Conflicting-interpretations-of-pathogenicity, likely-benign, benign Coding sequence variant, non coding transcript variant, missense variant
rs76315093 G>A Conflicting-interpretations-of-pathogenicity, benign Intron variant
rs80358229 G>A,T Pathogenic Stop gained, coding sequence variant, non coding transcript variant, missense variant
rs80358230 C>G Likely-pathogenic, pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs117587497 G>A Conflicting-interpretations-of-pathogenicity, benign-likely-benign, likely-benign, benign Coding sequence variant, intron variant, genic downstream transcript variant, synonymous variant, non coding transcript variant
miRNA miRNA information provided by mirtarbase database.
500
miRTarBase ID miRNA Experiments Reference
MIRT018588 hsa-miR-335-5p Microarray 18185580
MIRT1358390 hsa-miR-1178 CLIP-seq
MIRT1358391 hsa-miR-1252 CLIP-seq
MIRT1358392 hsa-miR-125a-5p CLIP-seq
MIRT1358393 hsa-miR-125b CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
41
GO ID Ontology Definition Evidence Reference
GO:0005351 Function Carbohydrate:proton symporter activity NAS 11247674
GO:0005737 Component Cytoplasm IEA
GO:0005829 Component Cytosol IDA
GO:0005886 Component Plasma membrane IDA 11592815
GO:0005886 Component Plasma membrane IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
606145 13444 ENSG00000197496
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O95528
Protein name Solute carrier family 2, facilitated glucose transporter member 10 (Glucose transporter type 10) (GLUT-10)
Protein function Facilitative glucose transporter required for the development of the cardiovascular system.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00083 Sugar_tr 11 332 Sugar (and other) transporter Family
PF00083 Sugar_tr 401 512 Sugar (and other) transporter Family
Tissue specificity TISSUE SPECIFICITY: Widely expressed; highest levels in liver and pancreas. {ECO:0000269|PubMed:11592815}.
Sequence
Sequence length 541
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Cellular hexose transport
Defective SLC2A10 causes arterial tortuosity syndrome (ATS)
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
27
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Arterial tortuosity syndrome Likely pathogenic; Pathogenic rs1980007276, rs2123045274, rs1434246419, rs770701918, rs2123045055, rs2123062030, rs2123045187, rs767864243, rs572620317, rs756457861, rs146579504, rs771028960, rs864309481, rs763220502, rs370547023
View all (19 more)
RCV001328465
RCV001784984
RCV001993032
RCV001970627
RCV001939459
View all (29 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Cardiovascular phenotype Pathogenic rs756457861, rs771028960 RCV000248625
RCV000251075
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Familial aortopathy Likely pathogenic; Pathogenic rs767864243, rs756457861, rs771702107 RCV004526620
RCV005431491
RCV004701025
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Familial thoracic aortic aneurysm and aortic dissection Likely pathogenic; Pathogenic rs2123045187, rs767864243, rs146579504, rs864309481, rs763220502, rs370547023, rs587776600, rs121908172, rs121908173, rs1341502906, rs2515589258, rs1474105130, rs1015798796 RCV003150466
RCV002310718
RCV004019778
RCV001798463
RCV005492791
View all (8 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ALZHEIMER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANDROGENETIC ALOPECIA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Aortic aneurysm, familial thoracic 2 Conflicting classifications of pathogenicity ClinVar
Disgenet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Aortic aneurysm, familial thoracic 6 Uncertain significance ClinVar
Disgenet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma Adenocarcinoma BEFREE 23564952, 25833149, 28593420, 28616268, 28940943
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 23076555, 23486266, 24423157, 25029118, 25236981, 25550848, 25833149, 26787602, 28432617, 28940943, 29228652, 29368062, 29952952, 30352093, 30833014
★☆☆☆☆
Found in Text Mining only
Aortic Aneurysm Aortic Aneurysm LHGDN 16550171
★☆☆☆☆
Found in Text Mining only
Aortic Dissection Aortic dissection Pubtator 28855619 Associate
★☆☆☆☆
Found in Text Mining only
Aortic Valve Insufficiency Aortic Valve Insufficiency HPO_DG
★☆☆☆☆
Found in Text Mining only
Aortic Valve Stenosis Aortic Valve Sclerosis HPO_DG
★☆☆☆☆
Found in Text Mining only
Arachnodactyly Arachnodactyly HPO_DG
★☆☆☆☆
Found in Text Mining only
ARTERIAL TORTUOSITY SYNDROME Arterial Tortuosity Syndrome GENOMICS_ENGLAND_DG 14569121, 16550171, 17935213
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
ARTERIAL TORTUOSITY SYNDROME Arterial Tortuosity Syndrome BEFREE 16550171, 17935213, 20735855, 22488877, 25373504, 26376865, 27153185, 28829359, 29149261, 29323665, 30800210, 31203799, 31621376
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
ARTERIAL TORTUOSITY SYNDROME Arterial Tortuosity Syndrome CLINVAR_DG 16550171, 17163528, 17935213, 18565096, 18774132, 18818946, 19622975, 19781076, 22488877, 23410549, 23494979, 25373504, 26376865
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)