Gene Gene information from NCBI Gene database.
Entrez ID 8076
Gene name Microfibril associated protein 5
Gene symbol MFAP5
Synonyms (NCBI Gene)
AAT9MAGP-2MAGP2MFAP-5MP25
Chromosome 12
Chromosome location 12p13.31
Summary This gene encodes a 25-kD microfibril-associated glycoprotein which is a component of microfibrils of the extracellular matrix. The encoded protein promotes attachment of cells to microfibrils via alpha-V-beta-3 integrin. Deficiency of this gene in mice r
SNPs SNP information provided by dbSNP.
3
SNP ID Visualize variation Clinical significance Consequence
rs724159961 C>A Pathogenic Coding sequence variant, missense variant, intron variant, non coding transcript variant
rs727502791 G>A Pathogenic Coding sequence variant, stop gained, non coding transcript variant
rs962247688 G>A Likely-pathogenic Non coding transcript variant, stop gained, intron variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
299
miRTarBase ID miRNA Experiments Reference
MIRT022336 hsa-miR-124-3p Microarray 18668037
MIRT707345 hsa-miR-6507-5p HITS-CLIP 21572407
MIRT707344 hsa-miR-1277-5p HITS-CLIP 21572407
MIRT707343 hsa-miR-369-3p HITS-CLIP 21572407
MIRT707342 hsa-miR-5692b HITS-CLIP 21572407
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
13
GO ID Ontology Definition Evidence Reference
GO:0001527 Component Microfibril IBA
GO:0001527 Component Microfibril IEA
GO:0001527 Component Microfibril ISS
GO:0005201 Function Extracellular matrix structural constituent RCA 25037231, 27068509, 28327460, 28675934
GO:0005201 Function Extracellular matrix structural constituent TAS 8557636
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601103 29673 ENSG00000197614
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q13361
Protein name Microfibrillar-associated protein 5 (MFAP-5) (MP25) (Microfibril-associated glycoprotein 2) (MAGP-2)
Protein function May play a role in hematopoiesis. In the cardiovascular system, could regulate growth factors or participate in cell signaling in maintaining large vessel integrity (By similarity). Component of the elastin-associated microfibrils (PubMed:855763
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF05507 MAGP 3 138 Microfibril-associated glycoprotein (MAGP) Family
Sequence
Sequence length 173
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Elastic fibre formation
Molecules associated with elastic fibres
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
24
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Aortic aneurysm, familial thoracic 9 Likely pathogenic rs2540288652 RCV003330248
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Familial thoracic aortic aneurysm and aortic dissection Likely pathogenic rs1179559567 RCV003155778
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Cardiovascular phenotype Uncertain significance; Conflicting classifications of pathogenicity; Likely benign; Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CATARACT GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cholangiocarcinoma Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma Adenocarcinoma BEFREE 31422503
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of colon Adenocarcinoma Of Colon BEFREE 31422503
★☆☆☆☆
Found in Text Mining only
Adenomatous Polyps Adenomatous Polyposis BEFREE 31422503
★☆☆☆☆
Found in Text Mining only
Aortic Aneurysm Thoracic Thoracic aortic aneurysm Pubtator 26854089 Associate
★☆☆☆☆
Found in Text Mining only
Aortic Aneurysm, Abdominal Aortic Aneurysm HPO_DG
★☆☆☆☆
Found in Text Mining only
AORTIC ANEURYSM, FAMILIAL THORACIC 9 Aortic Aneurysm UNIPROT_DG 25434006
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
AORTIC ANEURYSM, FAMILIAL THORACIC 9 Aortic Aneurysm GENOMICS_ENGLAND_DG 26854089
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
AORTIC ANEURYSM, FAMILIAL THORACIC 9 Aortic Aneurysm CLINVAR_DG
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
AORTIC ANEURYSM, FAMILIAL THORACIC 9 Aortic Aneurysm CTD_human_DG
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Aortic Aneurysm, Thoracic Aortic Aneurysm HPO_DG
★☆☆☆☆
Found in Text Mining only