Gene Gene information from NCBI Gene database.
Entrez ID 80224
Gene name NUBP iron-sulfur cluster assembly factor, mitochondrial
Gene symbol NUBPL
Synonyms (NCBI Gene)
C14orf127IND1MC1DN21huInd1
Chromosome 14
Chromosome location 14q12
Summary This gene encodes a member of the Mrp/NBP35 ATP-binding proteins family. The encoded protein is required for the assembly of the respiratory chain NADH dehydrogenase (complex I), an oligomeric enzymatic complex located in the inner mitochondrial membrane.
SNPs SNP information provided by dbSNP.
10
SNP ID Visualize variation Clinical significance Consequence
rs61752327 T>C Conflicting-interpretations-of-pathogenicity, uncertain-significance Intron variant, coding sequence variant, genic downstream transcript variant, 5 prime UTR variant, missense variant
rs118161496 T>C Conflicting-interpretations-of-pathogenicity, pathogenic, likely-pathogenic Intron variant, genic downstream transcript variant
rs201430951 T>C Uncertain-significance, pathogenic, likely-pathogenic Synonymous variant, coding sequence variant, genic upstream transcript variant, 5 prime UTR variant, non coding transcript variant, missense variant
rs397515440 G>T Likely-pathogenic, pathogenic Genic upstream transcript variant, coding sequence variant, missense variant, non coding transcript variant, 5 prime UTR variant
rs552722349 A>C,G Pathogenic Intron variant, missense variant, genic downstream transcript variant, synonymous variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
333
miRTarBase ID miRNA Experiments Reference
MIRT030602 hsa-miR-24-3p Microarray 19748357
MIRT030975 hsa-miR-21-5p Microarray 18591254
MIRT675478 hsa-miR-4781-3p HITS-CLIP 23824327
MIRT675477 hsa-miR-3155a HITS-CLIP 23824327
MIRT675476 hsa-miR-3155b HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
22
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0005515 Function Protein binding IPI 32296183
GO:0005524 Function ATP binding IEA
GO:0005739 Component Mitochondrion HTP 34800366
GO:0005739 Component Mitochondrion IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
613621 20278 ENSG00000151413
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q8TB37
Protein name Iron-sulfur cluster transfer protein NUBPL (IND1 homolog) (Nucleotide-binding protein-like) (huInd1)
Protein function Iron-sulfur cluster transfer protein involved in the assembly of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) (PubMed:19752196). May deliver one or more Fe-S clusters to complex I subunits (PubMed:19752196). {ECO:0
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF10609 ParA 65 311 NUBPL iron-transfer P-loop NTPase Family
Tissue specificity TISSUE SPECIFICITY: Highest expression in liver and kidney. expressed at significant levels in small intestine and brain (at protein level). {ECO:0000269|PubMed:19752196}.
Sequence
Sequence length 319
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Complex I biogenesis
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
17
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Mitochondrial complex I deficiency Likely pathogenic; Pathogenic rs201430951 RCV000191115
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Mitochondrial complex I deficiency, nuclear type 21 Likely pathogenic; Pathogenic rs201430951, rs863224123, rs1555338209, rs879255565, rs751631278, rs552722349, rs767543623, rs1273822033 RCV000786780
RCV003388417
RCV003989540
RCV000043476
RCV000043478
View all (3 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Gastric cancer Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LEIGH SYNDROME ClinGen, Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Malignant lymphoma, large B-cell, diffuse Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Malignant tumor of esophagus Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Blepharoptosis Ptosis HPO_DG
★☆☆☆☆
Found in Text Mining only
Cerebellar Ataxia Cerebellar ataxia Pubtator 30897263 Associate
★☆☆☆☆
Found in Text Mining only
Cerebellar atrophy Cerebellar atrophy BEFREE 30897263
★☆☆☆☆
Found in Text Mining only
Cerebellar Diseases Cerebellar diseases Pubtator 30897263 Associate
★☆☆☆☆
Found in Text Mining only
Colorectal Carcinoma Colorectal Cancer BEFREE 28346728
★☆☆☆☆
Found in Text Mining only
Colorectal Neoplasms Colorectal neoplasm Pubtator 28346728 Stimulate
★☆☆☆☆
Found in Text Mining only
Diabetes Mellitus Diabetes Mellitus HPO_DG
★☆☆☆☆
Found in Text Mining only
Dysarthria Dysarthria HPO_DG
★☆☆☆☆
Found in Text Mining only
Dystonia Dystonia Pubtator 30897263 Associate
★☆☆☆☆
Found in Text Mining only
Dystonia Disorders Dystonia BEFREE 30897263
★☆☆☆☆
Found in Text Mining only