Gene Gene information from NCBI Gene database.
Entrez ID 79188
Gene name Transmembrane protein 43
Gene symbol TMEM43
Synonyms (NCBI Gene)
ARVC5ARVD5AUNA3EDMD7EDMD7; AUNA2LUMA
Chromosome 3
Chromosome location 3p25.1
Summary This gene belongs to the TMEM43 family. Defects in this gene are the cause of familial arrhythmogenic right ventricular dysplasia type 5 (ARVD5), also known as arrhythmogenic right ventricular cardiomyopathy type 5 (ARVC5). Arrhythmogenic right ventricula
SNPs SNP information provided by dbSNP.
10
SNP ID Visualize variation Clinical significance Consequence
rs63750743 C>T Pathogenic Coding sequence variant, missense variant
rs116911972 T>C Benign, conflicting-interpretations-of-pathogenicity, benign-likely-benign Missense variant, coding sequence variant
rs144152046 C>T Conflicting-interpretations-of-pathogenicity, likely-benign Missense variant, coding sequence variant
rs144811578 A>G Pathogenic, likely-benign, uncertain-significance Coding sequence variant, missense variant
rs151010429 G>A,T Pathogenic, uncertain-significance, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
568
miRTarBase ID miRNA Experiments Reference
MIRT001406 hsa-miR-16-5p pSILAC 18668040
MIRT022952 hsa-miR-124-3p Microarray 18668037
MIRT025854 hsa-miR-7-5p Microarray 19073608
MIRT027185 hsa-miR-103a-3p Sequencing 20371350
MIRT001406 hsa-miR-16-5p Sequencing 20371350
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
18
GO ID Ontology Definition Evidence Reference
GO:0002376 Process Immune system process IEA
GO:0005515 Function Protein binding IPI 21391237, 25416956, 25910212, 26871637, 32296183, 32814053
GO:0005634 Component Nucleus IEA
GO:0005637 Component Nuclear inner membrane IBA
GO:0005637 Component Nuclear inner membrane IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
612048 28472 ENSG00000170876
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9BTV4
Protein name Transmembrane protein 43 (Protein LUMA)
Protein function May have an important role in maintaining nuclear envelope structure by organizing protein complexes at the inner nuclear membrane. Required for retaining emerin at the inner nuclear membrane (By similarity). Plays a role in the modulation of in
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF07787 TMEM43 121 373 Transmembrane protein 43 Family
Tissue specificity TISSUE SPECIFICITY: Highest expression in placenta. Also found at lower levels in heart, ovary, spleen, small intestine, thymus, prostate and testis. {ECO:0000269|PubMed:18230648}.
Sequence
Sequence length 400
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG 
  Cytoskeleton in muscle cells  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
28
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Arrhythmogenic right ventricular cardiomyopathy Pathogenic rs63750743 RCV000039375
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Arrhythmogenic right ventricular dysplasia 5 Pathogenic; Likely pathogenic rs63750743, rs1304467714 RCV000000770
RCV002466284
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Cardiomyopathy Pathogenic rs63750743 RCV001181315
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Cardiovascular phenotype Pathogenic rs63750743 RCV000621202
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA, FAMILIAL, 5 CTD, Disgenet, HPO
CTD, Disgenet, HPO
CTD, Disgenet, HPO
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Auditory neuropathy, autosomal dominant 3 Uncertain significance; Benign; Conflicting classifications of pathogenicity; Likely benign ClinVar
ClinVar, Disgenet, GenCC, HPO
ClinVar, Disgenet, GenCC, HPO
ClinVar, Disgenet, GenCC, HPO
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
AUTOSOMAL DOMINANT EMERY-DREIFUSS MUSCULAR DYSTROPHY Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Anxiety Anxiety disorder Pubtator 34500452 Associate
★☆☆☆☆
Found in Text Mining only
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy Pubtator 15680719, 18313022, 20124997, 21636032, 25343256, 25445213, 32062046, 33831308, 34500452, 34930282, 38166344, 40055648 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy LHGDN 18313022
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy CLINVAR_DG 18313022, 21214875, 22458570, 22725725, 23812740, 24598986
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy BEFREE 20124997, 21214875, 21267716, 21636032, 22458570, 22725725, 23812740, 24598986, 25343256, 26966288, 28960618, 29980933
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arrhythmogenic Right Ventricular Dysplasia Familial 5 Arrhythmogenic right ventricular cardiomyopathy Pubtator 18313022, 25343256, 32062046, 32858485 Associate
★☆☆☆☆
Found in Text Mining only
ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA, FAMILIAL, 5 (disorder) Arrhythmogenic right ventricular cardiomyopathy CLINVAR_DG 18313022, 21214875, 23812740, 25343256
★☆☆☆☆
Found in Text Mining only
ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA, FAMILIAL, 5 (disorder) Arrhythmogenic right ventricular cardiomyopathy UNIPROT_DG 18313022
★☆☆☆☆
Found in Text Mining only
ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA, FAMILIAL, 5 (disorder) Arrhythmogenic right ventricular cardiomyopathy GENOMICS_ENGLAND_DG 26840987, 27532257
★☆☆☆☆
Found in Text Mining only
ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA, FAMILIAL, 5 (disorder) Arrhythmogenic right ventricular cardiomyopathy CTD_human_DG
★☆☆☆☆
Found in Text Mining only