Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	78997
Gene name	Ganglioside induced differentiation associated protein 1 like 1
Gene symbol	GDAP1L1
Synonyms (NCBI Gene)	dJ881L22.1dJ995J12.1.1
Chromosome	20
Chromosome location	20q13.12
Summary	The ganglioside GD3 synthase causes cell differentiation with neurite sprouting when transfected into the mouse neuroblastoma cell line Neuro2a. After differentiation, the expression of several genes is upregulated, including one that encodes a protein te

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miRTarBase ID	miRNA	Experiments	Reference
MIRT668185	hsa-miR-411-5p	HITS-CLIP	23824327
MIRT636510	hsa-miR-3183	HITS-CLIP	23824327
MIRT636509	hsa-miR-4723-3p	HITS-CLIP	23824327
MIRT636508	hsa-miR-6769b-3p	HITS-CLIP	23824327
MIRT636507	hsa-miR-3615	HITS-CLIP	23824327
MIRT636506	hsa-miR-7110-3p	HITS-CLIP	23824327
MIRT636505	hsa-miR-6817-3p	HITS-CLIP	23824327
MIRT636504	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT636503	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT636502	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT636501	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT668185	hsa-miR-411-5p	HITS-CLIP	23824327
MIRT636500	hsa-miR-7111-3p	HITS-CLIP	23824327
MIRT636499	hsa-miR-6780a-3p	HITS-CLIP	23824327
MIRT636498	hsa-miR-6881-3p	HITS-CLIP	23824327
MIRT636497	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT636496	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT668184	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT668183	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT668182	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT636495	hsa-miR-3158-3p	HITS-CLIP	23824327
MIRT636510	hsa-miR-3183	HITS-CLIP	23824327
MIRT636509	hsa-miR-4723-3p	HITS-CLIP	23824327
MIRT636508	hsa-miR-6769b-3p	HITS-CLIP	23824327
MIRT636507	hsa-miR-3615	HITS-CLIP	23824327
MIRT636506	hsa-miR-7110-3p	HITS-CLIP	23824327
MIRT636505	hsa-miR-6817-3p	HITS-CLIP	23824327
MIRT636504	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT636503	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT636502	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT636501	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT636500	hsa-miR-7111-3p	HITS-CLIP	23824327
MIRT636499	hsa-miR-6780a-3p	HITS-CLIP	23824327
MIRT636498	hsa-miR-6881-3p	HITS-CLIP	23824327
MIRT636497	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT636496	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT636495	hsa-miR-3158-3p	HITS-CLIP	23824327
MIRT668185	hsa-miR-411-5p	HITS-CLIP	23824327
MIRT636510	hsa-miR-3183	HITS-CLIP	23824327
MIRT636509	hsa-miR-4723-3p	HITS-CLIP	23824327
MIRT636508	hsa-miR-6769b-3p	HITS-CLIP	23824327
MIRT636507	hsa-miR-3615	HITS-CLIP	23824327
MIRT636506	hsa-miR-7110-3p	HITS-CLIP	23824327
MIRT636505	hsa-miR-6817-3p	HITS-CLIP	23824327
MIRT636504	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT636503	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT636502	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT636501	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT668185	hsa-miR-411-5p	HITS-CLIP	23824327
MIRT636500	hsa-miR-7111-3p	HITS-CLIP	23824327
MIRT636499	hsa-miR-6780a-3p	HITS-CLIP	23824327
MIRT636498	hsa-miR-6881-3p	HITS-CLIP	23824327
MIRT636497	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT636496	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT668184	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT668183	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT668182	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT636495	hsa-miR-3158-3p	HITS-CLIP	23824327
MIRT636510	hsa-miR-3183	HITS-CLIP	23824327
MIRT636509	hsa-miR-4723-3p	HITS-CLIP	23824327
MIRT636508	hsa-miR-6769b-3p	HITS-CLIP	23824327
MIRT636507	hsa-miR-3615	HITS-CLIP	23824327
MIRT636506	hsa-miR-7110-3p	HITS-CLIP	23824327
MIRT636505	hsa-miR-6817-3p	HITS-CLIP	23824327
MIRT636504	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT636503	hsa-miR-516a-3p	HITS-CLIP	23824327
MIRT636502	hsa-miR-516b-3p	HITS-CLIP	23824327
MIRT636501	hsa-miR-7162-5p	HITS-CLIP	23824327
MIRT636500	hsa-miR-7111-3p	HITS-CLIP	23824327
MIRT636499	hsa-miR-6780a-3p	HITS-CLIP	23824327
MIRT636498	hsa-miR-6881-3p	HITS-CLIP	23824327
MIRT636497	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT636496	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT636495	hsa-miR-3158-3p	HITS-CLIP	23824327
MIRT1015332	hsa-miR-1224-3p	CLIP-seq
MIRT1015333	hsa-miR-1260	CLIP-seq
MIRT1015334	hsa-miR-1260b	CLIP-seq
MIRT1015335	hsa-miR-1280	CLIP-seq
MIRT1015336	hsa-miR-129-5p	CLIP-seq
MIRT1015337	hsa-miR-1914	CLIP-seq
MIRT1015338	hsa-miR-2355-3p	CLIP-seq
MIRT1015339	hsa-miR-3132	CLIP-seq
MIRT1015340	hsa-miR-3190	CLIP-seq
MIRT1015341	hsa-miR-377	CLIP-seq
MIRT1015342	hsa-miR-4646-3p	CLIP-seq
MIRT1015343	hsa-miR-4650-3p	CLIP-seq
MIRT1015344	hsa-miR-4652-3p	CLIP-seq
MIRT1015345	hsa-miR-4766-5p	CLIP-seq
MIRT1015346	hsa-miR-513a-5p	CLIP-seq
MIRT1015347	hsa-miR-676	CLIP-seq
MIRT1015348	hsa-miR-7	CLIP-seq
MIRT2538022	hsa-miR-1184	CLIP-seq
MIRT2538023	hsa-miR-4286	CLIP-seq
MIRT2538024	hsa-miR-4418	CLIP-seq
MIRT2538025	hsa-miR-509-3-5p	CLIP-seq
MIRT2538026	hsa-miR-509-5p	CLIP-seq

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GO ID	Ontology	Definition	Evidence	Reference
GO:0005739	Component	Mitochondrion	HTP	34800366

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Q96MZ0

Protein name

Ganglioside-induced differentiation-associated protein 1-like 1 (GDAP1-L1)

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF13417	GST_N_3	49 → 126	Glutathione S-transferase, N-terminal domain	Domain
PF13410	GST_C_2	179 → 304		Domain

Sequence

MATPNNLTPTNCSWWPISALESDAAKPAEAPDAPEAASPAHWPRESLVLYHWTQSFSSQK
VRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLGEEVPVIIHRDNIISDYDQIIDYVER
TFTGEHVVALMPEVGSLQHARVLQYRELLDALPMDAYTHGCILHPELTTDSMIPKYATAE
IRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQ
IEAELEKRKLENEGQKCELWLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQS
FFERVQRRFAFRKVLGDIHTTLLSAVIPNAFRLVKRKPPSFFGASFLMGSLGGMGYFAYW
YLKKKYI

Sequence length

367

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (2)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
LATE-ONSET ALZHEIMER'S DISEASE	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
TYPE 2 DIABETES MELLITUS	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (5)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Colorectal Carcinoma	Colorectal Cancer	UNIPROT_DG			★★★★★ ★☆☆☆☆ Found in Text Mining only
Diabetes Mellitus, Non-Insulin-Dependent	Diabetes Mellitus	GWASDB_DG	21874001		★★★★★ ★☆☆☆☆ Found in Text Mining only
Dyskeratosis Congenita	Dyskeratosis congenita	Pubtator	29696773	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Mood Disorders	Mood disorder	Pubtator	29696773	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Teratozoospermia	Teratozoospermia	Pubtator	25762640	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only

GDAP1L1 (ganglioside induced differentiation associated protein 1 like 1)