Gene Gene information from NCBI Gene database.
Entrez ID 7322
Gene name Ubiquitin conjugating enzyme E2 D2
Gene symbol UBE2D2
Synonyms (NCBI Gene)
E2(17)KB2PUBC1UBC4UBC4/5UBCH4UBCH5B
Chromosome 5
Chromosome location 5q31.2
Summary Regulated degradation of misfolded, damaged or short-lived proteins in eukaryotes occurs via the ubiquitin (Ub)-proteasome system (UPS). An integral part of the UPS system is the ubiquitination of target proteins and covalent linkage of Ub-containing prot
miRNA miRNA information provided by mirtarbase database.
330
miRTarBase ID miRNA Experiments Reference
MIRT020586 hsa-miR-155-5p Proteomics 18668040
MIRT024527 hsa-miR-215-5p Microarray 19074876
MIRT026243 hsa-miR-192-5p Microarray 19074876
MIRT032280 hsa-let-7b-5p Proteomics 18668040
MIRT047862 hsa-miR-30c-5p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
25
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0000209 Process Protein polyubiquitination IDA 15247280
GO:0004842 Function Ubiquitin-protein transferase activity IDA 18359941, 18703417, 20061386, 26475854
GO:0004842 Function Ubiquitin-protein transferase activity TAS 8090726
GO:0005515 Function Protein binding IPI 14667819, 15001359, 15231748, 18313049, 19043414, 19549727, 19615732, 19690564, 20152160, 20696396, 20705607, 22124327, 22158902, 22266821, 22902369, 24446487, 26752685, 26789245, 28514442, 32296183, 32814053, 33961781
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602962 12475 ENSG00000131508
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P62837
Protein name Ubiquitin-conjugating enzyme E2 D2 (EC 2.3.2.23) ((E3-independent) E2 ubiquitin-conjugating enzyme D2) (EC 2.3.2.24) (E2 ubiquitin-conjugating enzyme D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2(17)KB 2) (Ubiquitin-conjugating enzym
Protein function Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (PubMed:10329681, PubMed:18042044, PubMed:18703417, PubMed:20061386, PubMed:20403326, PubMed:20525694, PubMed:26475854, PubMed:28322253). Catalyzes 'Ly
PDB 1UR6 , 1W4U , 2CLW , 2ESK , 2ESO , 2ESP , 2ESQ , 3A33 , 3JVZ , 3JW0 , 3L1Y , 3TGD , 3ZNI , 4A49 , 4A4B , 4A4C , 4AUQ , 4DDG , 4DDI , 4LDT , 4V3K , 4V3L , 4WZ3 , 5D0K , 5D0M , 5D1K , 5D1L , 5D1M , 5EDV , 5MNJ , 5ULF , 5ULH , 5ULK , 5VZW , 5ZBU , 6HPR , 6M2C , 6SQO , 6SQR , 6SQS , 6TTU , 6W7Z , 6W9D , 7AI0 , 7AI1 , 7BOL , 7R71 , 8B3I , 8GBQ , 8GCB , 8GRM
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00179 UQ_con 5 142 Ubiquitin-conjugating enzyme Domain
Sequence
Sequence length 147
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Polycomb repressive complex
Ubiquitin mediated proteolysis
Protein processing in endoplasmic reticulum
Shigellosis
  Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha
TICAM1, RIP1-mediated IKK complex recruitment
Downstream TCR signaling
FCERI mediated NF-kB activation
CLEC7A (Dectin-1) signaling
Synthesis of active ubiquitin: roles of E1 and E2 enzymes
E3 ubiquitin ligases ubiquitinate target proteins
Neddylation
Peroxisomal protein import
IKK complex recruitment mediated by RIP1
Antigen processing: Ubiquitination & Proteasome degradation
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
1
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
SCHIZOPHRENIA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Breast Carcinoma Breast Carcinoma BEFREE 31336316
★☆☆☆☆
Found in Text Mining only
Colorectal Neoplasms Colorectal neoplasm Pubtator 30755640 Associate
★☆☆☆☆
Found in Text Mining only
Inflammatory Bowel Diseases Inflammatory bowel disease Pubtator 22710419 Associate
★☆☆☆☆
Found in Text Mining only
Malignant neoplasm of breast Breast Cancer BEFREE 31336316
★☆☆☆☆
Found in Text Mining only
Malignant Neoplasms Malignant Neoplasm BEFREE 12095419
★☆☆☆☆
Found in Text Mining only
Multiple Sclerosis, Relapsing-Remitting Multiple Sclerosis BEFREE 26395032
★☆☆☆☆
Found in Text Mining only
Neoplasms Neoplasms BEFREE 31336316
★☆☆☆☆
Found in Text Mining only