CCDC30 (coiled-coil domain containing 30)

Gene

• Entrez ID: 728621
• Gene name: Coiled-coil domain containing 30
• Gene symbol: CCDC30
• Synonyms (NCBI Gene): PFD6L, PFDN6L
• Chromosome: 1
• Chromosome location: 1p34.2

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT018282	hsa-miR-335-5p	Microarray	18185580
MIRT706334	hsa-miR-106a-5p	HITS-CLIP	22927820
MIRT706333	hsa-miR-106b-5p	HITS-CLIP	22927820
MIRT706332	hsa-miR-17-5p	HITS-CLIP	22927820
MIRT706331	hsa-miR-20a-5p	HITS-CLIP	22927820
MIRT706330	hsa-miR-20b-5p	HITS-CLIP	22927820
MIRT706329	hsa-miR-519d-3p	HITS-CLIP	22927820
MIRT706328	hsa-miR-526b-3p	HITS-CLIP	22927820
MIRT706327	hsa-miR-93-5p	HITS-CLIP	22927820
MIRT706326	hsa-miR-302a-3p	HITS-CLIP	22927820
MIRT706325	hsa-miR-302b-3p	HITS-CLIP	22927820
MIRT706324	hsa-miR-302c-3p	HITS-CLIP	22927820
MIRT706323	hsa-miR-302d-3p	HITS-CLIP	22927820
MIRT706322	hsa-miR-302e	HITS-CLIP	22927820
MIRT706321	hsa-miR-372-3p	HITS-CLIP	22927820
MIRT706320	hsa-miR-373-3p	HITS-CLIP	22927820
MIRT706319	hsa-miR-520a-3p	HITS-CLIP	22927820
MIRT706318	hsa-miR-520b	HITS-CLIP	22927820
MIRT706317	hsa-miR-520c-3p	HITS-CLIP	22927820
MIRT706316	hsa-miR-520d-3p	HITS-CLIP	22927820
MIRT706315	hsa-miR-520e	HITS-CLIP	22927820
MIRT706314	hsa-miR-512-3p	HITS-CLIP	22927820
MIRT706313	hsa-miR-520g-3p	HITS-CLIP	22927820
MIRT706312	hsa-miR-520h	HITS-CLIP	22927820
MIRT517098	hsa-miR-186-3p	HITS-CLIP	22927820
MIRT680120	hsa-miR-1224-3p	HITS-CLIP	22927820
MIRT706311	hsa-miR-3653-5p	HITS-CLIP	22927820
MIRT706310	hsa-miR-1976	HITS-CLIP	22927820
MIRT517096	hsa-miR-619-5p	HITS-CLIP	22927820
MIRT517095	hsa-miR-6506-5p	HITS-CLIP	22927820
MIRT680119	hsa-miR-6790-3p	HITS-CLIP	22927820
MIRT680118	hsa-miR-6821-3p	HITS-CLIP	22927820
MIRT659743	hsa-miR-6778-3p	HITS-CLIP	22927820
MIRT517094	hsa-miR-4731-5p	HITS-CLIP	22927820
MIRT517093	hsa-miR-5589-5p	HITS-CLIP	22927820
MIRT680117	hsa-miR-378a-5p	HITS-CLIP	22927820
MIRT680116	hsa-miR-640	HITS-CLIP	22927820
MIRT517091	hsa-miR-5089-5p	HITS-CLIP	22927820
MIRT517098	hsa-miR-186-3p	HITS-CLIP	23824327
MIRT680120	hsa-miR-1224-3p	HITS-CLIP	23824327
MIRT517097	hsa-miR-150-5p	HITS-CLIP	23824327
MIRT680119	hsa-miR-6790-3p	HITS-CLIP	23824327
MIRT680118	hsa-miR-6821-3p	HITS-CLIP	23824327
MIRT659743	hsa-miR-6778-3p	HITS-CLIP	23824327
MIRT680117	hsa-miR-378a-5p	HITS-CLIP	23824327
MIRT680116	hsa-miR-640	HITS-CLIP	23824327
MIRT659748	hsa-miR-6165	HITS-CLIP	23824327
MIRT659747	hsa-miR-4690-5p	HITS-CLIP	23824327
MIRT659746	hsa-miR-6510-5p	HITS-CLIP	23824327
MIRT659745	hsa-miR-2114-3p	HITS-CLIP	23824327
MIRT659744	hsa-miR-6823-3p	HITS-CLIP	23824327
MIRT659743	hsa-miR-6778-3p	HITS-CLIP	23824327
MIRT659742	hsa-miR-516a-5p	HITS-CLIP	23824327
MIRT517101	hsa-miR-3186-5p	PAR-CLIP	23446348
MIRT517100	hsa-miR-1295b-3p	PAR-CLIP	23446348
MIRT517099	hsa-miR-4698	PAR-CLIP	23446348
MIRT517098	hsa-miR-186-3p	PAR-CLIP	23446348
MIRT517097	hsa-miR-150-5p	PAR-CLIP	23446348
MIRT517096	hsa-miR-619-5p	PAR-CLIP	23446348
MIRT517095	hsa-miR-6506-5p	PAR-CLIP	23446348
MIRT517094	hsa-miR-4731-5p	PAR-CLIP	23446348
MIRT517093	hsa-miR-5589-5p	PAR-CLIP	23446348
MIRT517092	hsa-miR-6807-5p	PAR-CLIP	23446348
MIRT517091	hsa-miR-5089-5p	PAR-CLIP	23446348
MIRT706334	hsa-miR-106a-5p	HITS-CLIP	22927820
MIRT706333	hsa-miR-106b-5p	HITS-CLIP	22927820
MIRT706332	hsa-miR-17-5p	HITS-CLIP	22927820
MIRT706331	hsa-miR-20a-5p	HITS-CLIP	22927820
MIRT706330	hsa-miR-20b-5p	HITS-CLIP	22927820
MIRT706329	hsa-miR-519d-3p	HITS-CLIP	22927820
MIRT706328	hsa-miR-526b-3p	HITS-CLIP	22927820
MIRT706327	hsa-miR-93-5p	HITS-CLIP	22927820
MIRT706326	hsa-miR-302a-3p	HITS-CLIP	22927820
MIRT706325	hsa-miR-302b-3p	HITS-CLIP	22927820
MIRT706324	hsa-miR-302c-3p	HITS-CLIP	22927820
MIRT706323	hsa-miR-302d-3p	HITS-CLIP	22927820
MIRT706322	hsa-miR-302e	HITS-CLIP	22927820
MIRT706321	hsa-miR-372-3p	HITS-CLIP	22927820
MIRT706320	hsa-miR-373-3p	HITS-CLIP	22927820
MIRT706319	hsa-miR-520a-3p	HITS-CLIP	22927820
MIRT706318	hsa-miR-520b	HITS-CLIP	22927820
MIRT706317	hsa-miR-520c-3p	HITS-CLIP	22927820
MIRT706316	hsa-miR-520d-3p	HITS-CLIP	22927820
MIRT706315	hsa-miR-520e	HITS-CLIP	22927820
MIRT706314	hsa-miR-512-3p	HITS-CLIP	22927820
MIRT706313	hsa-miR-520g-3p	HITS-CLIP	22927820
MIRT706312	hsa-miR-520h	HITS-CLIP	22927820
MIRT517098	hsa-miR-186-3p	HITS-CLIP	22927820
MIRT680120	hsa-miR-1224-3p	HITS-CLIP	22927820
MIRT706311	hsa-miR-3653-5p	HITS-CLIP	22927820
MIRT706310	hsa-miR-1976	HITS-CLIP	22927820
MIRT517096	hsa-miR-619-5p	HITS-CLIP	22927820
MIRT517095	hsa-miR-6506-5p	HITS-CLIP	22927820
MIRT680119	hsa-miR-6790-3p	HITS-CLIP	22927820
MIRT680118	hsa-miR-6821-3p	HITS-CLIP	22927820
MIRT659743	hsa-miR-6778-3p	HITS-CLIP	22927820
MIRT517094	hsa-miR-4731-5p	HITS-CLIP	22927820
MIRT517093	hsa-miR-5589-5p	HITS-CLIP	22927820
MIRT680117	hsa-miR-378a-5p	HITS-CLIP	22927820
MIRT680116	hsa-miR-640	HITS-CLIP	22927820
MIRT517091	hsa-miR-5089-5p	HITS-CLIP	22927820
MIRT517098	hsa-miR-186-3p	HITS-CLIP	23824327
MIRT680120	hsa-miR-1224-3p	HITS-CLIP	23824327
MIRT517097	hsa-miR-150-5p	HITS-CLIP	23824327
MIRT680119	hsa-miR-6790-3p	HITS-CLIP	23824327
MIRT680118	hsa-miR-6821-3p	HITS-CLIP	23824327
MIRT659743	hsa-miR-6778-3p	HITS-CLIP	23824327
MIRT680117	hsa-miR-378a-5p	HITS-CLIP	23824327
MIRT680116	hsa-miR-640	HITS-CLIP	23824327
MIRT659748	hsa-miR-6165	HITS-CLIP	23824327
MIRT659747	hsa-miR-4690-5p	HITS-CLIP	23824327
MIRT659746	hsa-miR-6510-5p	HITS-CLIP	23824327
MIRT659745	hsa-miR-2114-3p	HITS-CLIP	23824327
MIRT659744	hsa-miR-6823-3p	HITS-CLIP	23824327
MIRT659743	hsa-miR-6778-3p	HITS-CLIP	23824327
MIRT659742	hsa-miR-516a-5p	HITS-CLIP	23824327
MIRT517101	hsa-miR-3186-5p	PAR-CLIP	23446348
MIRT517100	hsa-miR-1295b-3p	PAR-CLIP	23446348
MIRT517099	hsa-miR-4698	PAR-CLIP	23446348
MIRT517098	hsa-miR-186-3p	PAR-CLIP	23446348
MIRT517097	hsa-miR-150-5p	PAR-CLIP	23446348
MIRT517096	hsa-miR-619-5p	PAR-CLIP	23446348
MIRT517095	hsa-miR-6506-5p	PAR-CLIP	23446348
MIRT517094	hsa-miR-4731-5p	PAR-CLIP	23446348
MIRT517093	hsa-miR-5589-5p	PAR-CLIP	23446348
MIRT517092	hsa-miR-6807-5p	PAR-CLIP	23446348
MIRT517091	hsa-miR-5089-5p	PAR-CLIP	23446348
MIRT868791	hsa-miR-1193	CLIP-seq
MIRT868792	hsa-miR-1237	CLIP-seq
MIRT868793	hsa-miR-2392	CLIP-seq
MIRT868794	hsa-miR-3152-3p	CLIP-seq
MIRT868795	hsa-miR-3199	CLIP-seq
MIRT868796	hsa-miR-3545-3p	CLIP-seq
MIRT868797	hsa-miR-3614-3p	CLIP-seq
MIRT868798	hsa-miR-3622a-5p	CLIP-seq
MIRT868799	hsa-miR-4258	CLIP-seq
MIRT868800	hsa-miR-4269	CLIP-seq
MIRT868801	hsa-miR-4279	CLIP-seq
MIRT868802	hsa-miR-4303	CLIP-seq
MIRT868803	hsa-miR-4423-3p	CLIP-seq
MIRT868804	hsa-miR-4438	CLIP-seq
MIRT868805	hsa-miR-4662a-5p	CLIP-seq
MIRT868806	hsa-miR-4676-5p	CLIP-seq
MIRT868807	hsa-miR-4682	CLIP-seq
MIRT868808	hsa-miR-4722-3p	CLIP-seq
MIRT868809	hsa-miR-5095	CLIP-seq
MIRT868810	hsa-miR-5096	CLIP-seq
MIRT868811	hsa-miR-575	CLIP-seq
MIRT868791	hsa-miR-1193	CLIP-seq
MIRT1921942	hsa-miR-129-5p	CLIP-seq
MIRT868793	hsa-miR-2392	CLIP-seq
MIRT1921943	hsa-miR-3149	CLIP-seq
MIRT868794	hsa-miR-3152-3p	CLIP-seq
MIRT1921944	hsa-miR-411	CLIP-seq
MIRT868805	hsa-miR-4662a-5p	CLIP-seq
MIRT868806	hsa-miR-4676-5p	CLIP-seq
MIRT868810	hsa-miR-5096	CLIP-seq
MIRT868811	hsa-miR-575	CLIP-seq
MIRT1957785	hsa-miR-106a	CLIP-seq
MIRT1957786	hsa-miR-106b	CLIP-seq
MIRT868791	hsa-miR-1193	CLIP-seq
MIRT1957787	hsa-miR-122	CLIP-seq
MIRT1957788	hsa-miR-150	CLIP-seq
MIRT1957789	hsa-miR-17	CLIP-seq
MIRT1957790	hsa-miR-20a	CLIP-seq
MIRT1957791	hsa-miR-20b	CLIP-seq
MIRT868793	hsa-miR-2392	CLIP-seq
MIRT1957792	hsa-miR-302a	CLIP-seq
MIRT1957793	hsa-miR-302b	CLIP-seq
MIRT1957794	hsa-miR-302c	CLIP-seq
MIRT1957795	hsa-miR-302d	CLIP-seq
MIRT1957796	hsa-miR-3135b	CLIP-seq
MIRT868794	hsa-miR-3152-3p	CLIP-seq
MIRT1957797	hsa-miR-3652	CLIP-seq
MIRT1957798	hsa-miR-3664-5p	CLIP-seq
MIRT1957799	hsa-miR-372	CLIP-seq
MIRT1957800	hsa-miR-373	CLIP-seq
MIRT1957801	hsa-miR-3907	CLIP-seq
MIRT868799	hsa-miR-4258	CLIP-seq
MIRT868800	hsa-miR-4269	CLIP-seq
MIRT1957802	hsa-miR-4430	CLIP-seq
MIRT868804	hsa-miR-4438	CLIP-seq
MIRT1957803	hsa-miR-4639-3p	CLIP-seq
MIRT868805	hsa-miR-4662a-5p	CLIP-seq
MIRT868806	hsa-miR-4676-5p	CLIP-seq
MIRT868809	hsa-miR-5095	CLIP-seq
MIRT868810	hsa-miR-5096	CLIP-seq
MIRT1957804	hsa-miR-519d	CLIP-seq
MIRT1957805	hsa-miR-520g	CLIP-seq
MIRT868811	hsa-miR-575	CLIP-seq
MIRT1957806	hsa-miR-93	CLIP-seq
MIRT1957785	hsa-miR-106a	CLIP-seq
MIRT1957786	hsa-miR-106b	CLIP-seq
MIRT868791	hsa-miR-1193	CLIP-seq
MIRT1957787	hsa-miR-122	CLIP-seq
MIRT1921942	hsa-miR-129-5p	CLIP-seq
MIRT1957788	hsa-miR-150	CLIP-seq
MIRT1957789	hsa-miR-17	CLIP-seq
MIRT1957790	hsa-miR-20a	CLIP-seq
MIRT1957791	hsa-miR-20b	CLIP-seq
MIRT868793	hsa-miR-2392	CLIP-seq
MIRT1957792	hsa-miR-302a	CLIP-seq
MIRT1957793	hsa-miR-302b	CLIP-seq
MIRT1957794	hsa-miR-302c	CLIP-seq
MIRT1957795	hsa-miR-302d	CLIP-seq
MIRT1957796	hsa-miR-3135b	CLIP-seq
MIRT1921943	hsa-miR-3149	CLIP-seq
MIRT868794	hsa-miR-3152-3p	CLIP-seq
MIRT868795	hsa-miR-3199	CLIP-seq
MIRT868798	hsa-miR-3622a-5p	CLIP-seq
MIRT1957797	hsa-miR-3652	CLIP-seq
MIRT1957798	hsa-miR-3664-5p	CLIP-seq
MIRT1957799	hsa-miR-372	CLIP-seq
MIRT1957800	hsa-miR-373	CLIP-seq
MIRT1957801	hsa-miR-3907	CLIP-seq
MIRT1921944	hsa-miR-411	CLIP-seq
MIRT868799	hsa-miR-4258	CLIP-seq
MIRT868800	hsa-miR-4269	CLIP-seq
MIRT868803	hsa-miR-4423-3p	CLIP-seq
MIRT1957802	hsa-miR-4430	CLIP-seq
MIRT868804	hsa-miR-4438	CLIP-seq
MIRT1957803	hsa-miR-4639-3p	CLIP-seq
MIRT868805	hsa-miR-4662a-5p	CLIP-seq
MIRT868806	hsa-miR-4676-5p	CLIP-seq
MIRT2194841	hsa-miR-4775	CLIP-seq
MIRT868809	hsa-miR-5095	CLIP-seq
MIRT868810	hsa-miR-5096	CLIP-seq
MIRT1957804	hsa-miR-519d	CLIP-seq
MIRT1957805	hsa-miR-520g	CLIP-seq
MIRT868811	hsa-miR-575	CLIP-seq
MIRT2194842	hsa-miR-590-3p	CLIP-seq
MIRT1957806	hsa-miR-93	CLIP-seq
MIRT2436124	hsa-miR-539	CLIP-seq
MIRT2436125	hsa-miR-580	CLIP-seq
MIRT2436124	hsa-miR-539	CLIP-seq
MIRT2436125	hsa-miR-580	CLIP-seq
MIRT2498152	hsa-miR-134	CLIP-seq
MIRT2498153	hsa-miR-3118	CLIP-seq
MIRT2498154	hsa-miR-3164	CLIP-seq
MIRT2498155	hsa-miR-3194-3p	CLIP-seq
MIRT2498156	hsa-miR-4501	CLIP-seq
MIRT2498157	hsa-miR-4666-5p	CLIP-seq
MIRT2498158	hsa-miR-4693-5p	CLIP-seq
MIRT2498159	hsa-miR-4709-3p	CLIP-seq
MIRT2498160	hsa-miR-4742-3p	CLIP-seq
MIRT2498161	hsa-miR-943	CLIP-seq
MIRT2498152	hsa-miR-134	CLIP-seq
MIRT2498153	hsa-miR-3118	CLIP-seq
MIRT2498154	hsa-miR-3164	CLIP-seq
MIRT2498156	hsa-miR-4501	CLIP-seq
MIRT2498158	hsa-miR-4693-5p	CLIP-seq
MIRT2498160	hsa-miR-4742-3p	CLIP-seq
MIRT2498161	hsa-miR-943	CLIP-seq

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q5VVM6
• Protein name: Coiled-coil domain-containing protein 30 (Prefoldin subunit 6-like protein)
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF15742	DUF4686	227 → 610	Domain of unknown function (DUF4686)	Coiled-coil

• Tissue specificity: TISSUE SPECIFICITY: Expressed in brain, kidney, pancreas, placenta, liver, thymus and prostate. {ECO:0000269|PubMed:16710767}.
• Sequence:

  MSQEKNEMFESEWSKEREREKQLASGLDTAEKALKVESEELQKSKSELICLYNEVHNLPG
  ESESKDHFLIACDLLQRENSELETKVLKLSQEFAQLNHFTLGGKTAPSNLITSENTCKDP
  ESNEPILETEIQSRKEETEELCPKLGERKQKEIPEESVKEGSFPREGQKEEGSQQNRDMK
  DEEKEQQLTMKPEEIVRLREELSHINQSLLQSQSSGDSSDDSGAQHPSSGEKLKYNQQGE
  VQQLHQNLHRLQILCNSAENELRYERGQNLDLKQHNSLLQEENIKIKIELKHAQQKLLDS
  TKMCSSLTAEYKHCQQKIKELELEVLKHTQSIKSQNNLQEKLVQEKSKVADAEEKILDLQ
  RKLEHAHKVCLTDTCISEKQQLEEKIKEATQNEAKVKQQYQEEQQKRKLLYQNVDELHRQ
  VRTLQDKENLLEMTCSQQQSRIQQQEALLKQLENEKRKYDEHVKSNQELSEKLSKLQQEK
  EALREEYLRLLKLLNVHVRNYNEKHHQQKVKLQKVKYRLTNEVELRDKRINQFEDEIGIL
  QHKIEKEKAIQDQITAQNDTLLLEKRKLQEQVIEQEQLIHSNKWTISSIQSRVLYMDKEN
  KQLQENSLRLTQQIGFLERIIRSIHIRRGENLKEFPVPKWWHRGKLASLPPTKKQKEIYS
  TEVFTSNNAELQHEDESVPEATEKWKHSEQMETTISDILESEVVNEILPLSNSSFSGKGL
  VESFASLQETEEIKSKEAMASSKSPEKSPENLVCSQNSEAGYINVASLKETHGIQEQDQK
  SEL

• Sequence length: 783

Associated diseases

Evidence Score:

• ★☆☆☆☆  Gene-disease association found in Text Mining only
• ★★☆☆☆  Found in Text Mining and Unknown/Other Associations
• ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources
• ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants)
• ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Unknown / Other Associations
Phenotype Name	Clinical Significance	Source	Evidence Score
BREAST CANCER	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
BREAST CARCINOMA	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
CARDIOMYOPATHY, DILATED, 2C	—	Disgenet	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
CORONARY ARTERY DISEASE	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Familial cancer of breast	Uncertain significance	ClinVar	★★☆☆☆ Found in Text Mining + Unknown/Other Associations
FOCAL SEGMENTAL GLOMERULOSCLEROSIS	—	GWAS catalog	★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Associations from Text Mining
Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Asthma	Asthma	Pubtator	35606283	Associate	★☆☆☆☆ Found in Text Mining only
Malignant Neoplasms	Malignant Neoplasm	BEFREE	27089969		★☆☆☆☆ Found in Text Mining only
Thyroid Neoplasms	Thyroid cancer	Pubtator	32737449	Associate	★☆☆☆☆ Found in Text Mining only