Gene Gene information from NCBI Gene database.
Entrez ID 7253
Gene name Thyroid stimulating hormone receptor
Gene symbol TSHR
Synonyms (NCBI Gene)
CHNG1LGR3hTSHR-I
Chromosome 14
Chromosome location 14q31.1
Summary The protein encoded by this gene is a membrane protein and a major controller of thyroid cell metabolism. The encoded protein is a receptor for thyrothropin and thyrostimulin, and its activity is mediated by adenylate cyclase. Defects in this gene are a c
miRNA miRNA information provided by mirtarbase database.
42
miRTarBase ID miRNA Experiments Reference
MIRT017856 hsa-miR-335-5p Microarray 18185580
MIRT023731 hsa-miR-1-3p Microarray 18668037
MIRT025045 hsa-miR-181a-5p Microarray 17612493
MIRT1458698 hsa-miR-1270 CLIP-seq
MIRT1458699 hsa-miR-1286 CLIP-seq
Transcription factors Transcription factors information provided by TRRUST V2 database.
2
Transcription factor Regulation Reference
PAX8 Repression 17614769
PPARG Repression 17614769
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
34
GO ID Ontology Definition Evidence Reference
GO:0004930 Function G protein-coupled receptor activity IEA
GO:0004996 Function Thyroid-stimulating hormone receptor activity IBA
GO:0004996 Function Thyroid-stimulating hormone receptor activity IEA
GO:0004996 Function Thyroid-stimulating hormone receptor activity IMP 11847099
GO:0004996 Function Thyroid-stimulating hormone receptor activity TAS 8552586
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
603372 12373 ENSG00000165409
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P16473
Protein name Thyrotropin receptor (Thyroid-stimulating hormone receptor) (TSH-R)
Protein function Receptor for the thyroid-stimulating hormone (TSH) or thyrotropin (PubMed:11847099, PubMed:12045258). Also acts as a receptor for the heterodimeric glycoprotein hormone (GPHA2:GPHB5) or thyrostimulin (PubMed:12045258). The activity of this recep
PDB 2XWT , 3G04 , 7T9I , 7T9M , 7T9N , 7UTZ , 7XW5 , 7XW6 , 7XW7
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13306 LRR_5 53 143 BspA type Leucine rich repeat region (6 copies) Repeat
PF00001 7tm_1 431 678 7 transmembrane receptor (rhodopsin family) Family
Tissue specificity TISSUE SPECIFICITY: Expressed in thyroide cells (at protein level) (PubMed:11847099). Expressed in the thyroid (PubMed:2610690). {ECO:0000269|PubMed:11847099, ECO:0000269|PubMed:2610690}.
Sequence
MRPADLLQLVLLLDLPRDLGGMGCSSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLI
ETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPD
ALKELPLLKFLGIFNTGLKMFPD
LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETL
TLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA
LPSKGLEHLKELIARNTWTLKKLPLSLSFLHLTRADLSYPSHCCAFKNQKKIRGILESLM
CNESSMQSLRQRKSVNALNSPLHQEYEENLGDSIVGYKEKSKFQDTHNNAHYYVFFEEQE
DEIIGFGQELKNPQEETLQAFDSHYDYTICGDSEDMVCTPKSDEFNPCEDIMGYKFLRIV
VWFVSLLALLGNVFVLLILLTSHYKLNVPRFLMCNLAFADFCMGMYLLLIASVDLYTHSE
YYNHAIDWQTGPGCNTAGFFTVFASELSVYTLTVITLERWYAITFAMRLDRKIRLRHACA
IMVGGWVCCFLLALLPLVGISSYAKVSICLPMDTETPLALAYIVFVLTLNIVAFVIVCCC
YVKIYITVRNPQYNPGDKDTKIAKRMAVLIFTDFICMAPISFYALSAILNKPLITVSNSK
ILLVLFYPLNSCANPFLY
AIFTKAFQRDVFILLSKFGICKRQAQAYRGQRVPPKNSTDIQ
VQKVTHDMRQGLHNMEDVYELIENSHLTPKKQGQISEEYMQTVL
Sequence length 764
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  cAMP signaling pathway
Neuroactive ligand-receptor interaction
Hormone signaling
Thyroid hormone synthesis
Regulation of lipolysis in adipocytes
Autoimmune thyroid disease
  Hormone ligand-binding receptors
G alpha (s) signalling events
ADORA2B mediated anti-inflammatory cytokines production
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
58
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Congenital hypothyroidism Likely pathogenic; Pathogenic rs121908866, rs189261858 RCV006439562
RCV000826152
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Familial gestational hyperthyroidism Likely pathogenic; Pathogenic rs761918916, rs121908863, rs121908865, rs121908866, rs121908871, rs121908872, rs121908879, rs189261858, rs774078708, rs1330247874, rs1320718774, rs760874290, rs1064794318, rs1085307573, rs780018604 RCV002476874
RCV002490329
RCV005007829
RCV005007830
RCV002490330
View all (10 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Familial hyperthyroidism due to mutations in TSH receptor Likely pathogenic; Pathogenic rs761918916, rs121908861, rs121908863, rs121908864, rs121908865, rs121908866, rs121908871, rs121908872, rs121908874, rs121908875, rs121908876, rs121908877, rs121908873, rs121908880, rs121908883
View all (8 more)
RCV002476874
RCV000006802
RCV002490329
RCV000006806
RCV005007829
View all (19 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Hypothyroidism due to TSH receptor mutations Likely pathogenic; Pathogenic rs2140111252, rs761918916, rs2140112570, rs786204790, rs121908862, rs121908863, rs121908865, rs121908866, rs121908867, rs121908870, rs121908871, rs121908872, rs2140110277, rs121908881, rs121908884
View all (17 more)
RCV005408864
RCV002274197
RCV002251066
RCV000169681
RCV000006804
View all (27 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign; Likely benign; Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANTIPHOSPHOLIPID SYNDROME GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ATHYREOSIS GenCC
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
autistic features Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute Promyelocytic Leukemia Promyelocytic Leukemia BEFREE 16890892, 29976201
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 22842620
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma, Oxyphilic Adenocarcinoma BEFREE 10037070
★☆☆☆☆
Found in Text Mining only
Adenoma Adenoma BEFREE 10487692, 10595453, 10650954, 11127522, 11375794, 12039695, 12665646, 12804102, 14514342, 17381350, 19383781, 19492584, 22815044, 7566968, 7673402
View all (11 more)
★☆☆☆☆
Found in Text Mining only
Adenoma Adenoma CTD_human_DG 8413627
★☆☆☆☆
Found in Text Mining only
Adenoma, Basal Cell Adenoma CTD_human_DG 8413627
★☆☆☆☆
Found in Text Mining only
Adenoma, Microcystic Adenoma CTD_human_DG 8413627
★☆☆☆☆
Found in Text Mining only
Adenoma, Monomorphic Adenoma CTD_human_DG 8413627
★☆☆☆☆
Found in Text Mining only
Adenoma, Trabecular Adenoma CTD_human_DG 8413627
★☆☆☆☆
Found in Text Mining only
Adrenal Cancer Adrenal Cancer CTD_human_DG 19131502
★☆☆☆☆
Found in Text Mining only