Gene Gene information from NCBI Gene database.
Entrez ID 7173
Gene name Thyroid peroxidase
Gene symbol TPO
Synonyms (NCBI Gene)
MSATDH2ATPX
Chromosome 2
Chromosome location 2p25.3
Summary This gene encodes a membrane-bound glycoprotein. The encoded protein acts as an enzyme and plays a central role in thyroid gland function. The protein functions in the iodination of tyrosine residues in thyroglobulin and phenoxy-ester formation between pa
SNPs SNP information provided by dbSNP.
22
SNP ID Visualize variation Clinical significance Consequence
rs104893669 A>G,T Pathogenic Coding sequence variant, missense variant
rs121908082 C>A,G,T Pathogenic Coding sequence variant, missense variant, intron variant, stop gained, synonymous variant
rs121908083 T>G Pathogenic Coding sequence variant, missense variant
rs121908084 G>A,C Pathogenic Intron variant, coding sequence variant, missense variant
rs121908085 G>A Pathogenic Intron variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
13
miRTarBase ID miRNA Experiments Reference
MIRT018757 hsa-miR-335-5p Microarray 18185580
MIRT030038 hsa-miR-26b-5p Microarray 19088304
MIRT736607 hsa-let-7a-3p RNA-seqqRT-PCR 32824820
MIRT1449916 hsa-miR-1292 CLIP-seq
MIRT1449917 hsa-miR-3122 CLIP-seq
Transcription factors Transcription factors information provided by TRRUST V2 database.
4
Transcription factor Regulation Reference
CLOCK Unknown 22284746
FOXA2 Activation 8602863
FOXE1 Unknown 10329730;20094846
TTF2 Activation 8602863
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
20
GO ID Ontology Definition Evidence Reference
GO:0004447 Function Iodide peroxidase activity IEA
GO:0004601 Function Peroxidase activity IBA
GO:0004601 Function Peroxidase activity IEA
GO:0004601 Function Peroxidase activity TAS 3475693
GO:0005509 Function Calcium ion binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
606765 12015 ENSG00000115705
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P07202
Protein name Thyroid peroxidase (TPO) (EC 1.11.1.8)
Protein function Iodination and coupling of the hormonogenic tyrosines in thyroglobulin to yield the thyroid hormones T(3) and T(4).
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03098 An_peroxidase 151 709 Animal haem peroxidase Domain
PF00084 Sushi 742 794 Sushi repeat (SCR repeat) Domain
PF07645 EGF_CA 796 838 Calcium-binding EGF domain Domain
Sequence
MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR
NLKKRGILSPAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS
EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRDHPRWGASNTALARWLPPV
YEDGFSQPRGWNPGFLYNGFPLPPVREVTRHVIQVSNEVVTDDDRYSDLLMAWGQYIDHD
IAFTPQSTSKAAFGGGADCQMTCENQNPCFPIQLPEEARPAAGTACLPFYRSSAACGTGD
QGALFGNLSTANPRQQMNGLTSFLDASTVYGSSPALERQLRNWTSAEGLLRVHARLRDSG
RAYLPFVPPRAPAACAPEPGIPGETRGPCFLAGDGRASEVPSLTALHTLWLREHNRLAAA
LKALNAHWSADAVYQEARKVVGALHQIITLRDYIPRILGPEAFQQYVGPYEGYDSTANPT
VSNVFSTAAFRFGHATIHPLVRRLDASFQEHPDLPGLWLHQAFFSPWTLLRGGGLDPLIR
GLLARPAKLQVQDQLMNEELTERLFVLSNSSTLDLASINLQRGRDHGLPGYNEWREFCGL
PRLETPADLSTAIASRSVADKILDLYKHPDNIDVWLGGLAENFLPRARTGPLFACLIGKQ
MKALRDGDWFWWENSHVFTDAQRRELEKHSLSRVICDNTGLTRVPMDAF
QVGKFPEDFES
CDSITGMNLEAWRETFPQDDKCGFPESVENGDFVHCEESGRRVLVYSCRHGYELQGREQL
TCTQEGWDFQPPLC
KDVNECADGAHPPCHASARCRNTKGGFQCLCADPYELGDDGRTCVD
SGRLPRVTWISMSLAALLIGGFAGLTSTVICRWTRTGTKSTLPISETGGGTPELRCGKHQ
AVGTSPQRAAAQDSEQESAGMEGRDTHRLPRAL
Sequence length 933
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Tyrosine metabolism
Metabolic pathways
Thyroid hormone synthesis
Autoimmune thyroid disease
  Thyroxine biosynthesis
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
35
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Congenital hypothyroidism Pathogenic; Likely pathogenic rs749174434, rs770781635, rs1670028028, rs1385139268 RCV006442434
RCV006436376
RCV001270335
RCV001270340
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Deficiency of iodide peroxidase Pathogenic; Likely pathogenic rs200273438, rs778515113, rs201800220, rs556552435, rs774713681, rs749174434, rs753012199, rs2125001180, rs759809305, rs121908082, rs104893669, rs121908083, rs121908084, rs121908085, rs760307139
View all (24 more)
RCV001329365
RCV003230667
RCV001376081
RCV002280187
RCV002274208
View all (35 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Lung cancer Pathogenic rs778515113 RCV005912570
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Neurodevelopmental disorder Pathogenic rs778515113 RCV001374909
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ANKYLOSING SPONDYLITIS AND OTHER INFLAMMATORY SPONDYLOPATHIES Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOIMMUNE DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOIMMUNE DISEASES CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOIMMUNE THYROID DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Ablepharon Ablepharon BEFREE 29027029
★☆☆☆☆
Found in Text Mining only
Addison Disease Addison`s Disease BEFREE 10520899, 25935328, 9745420
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 29508480
★☆☆☆☆
Found in Text Mining only
Adenoma Adenoma BEFREE 10487692, 1761161, 1996981, 31777257
★☆☆☆☆
Found in Text Mining only
Adenoma Adenoma LHGDN 16614712
★☆☆☆☆
Found in Text Mining only
Adrenal Gland Diseases Adrenal Gland Diseases BEFREE 10520899
★☆☆☆☆
Found in Text Mining only
Adrenoleukodystrophy Adrenoleukodystrophy BEFREE 9745420
★☆☆☆☆
Found in Text Mining only
Adult type dermatomyositis Dermatomyositis BEFREE 31779485
★☆☆☆☆
Found in Text Mining only
Aggressive Periodontitis Aggressive Periodontitis BEFREE 28670258
★☆☆☆☆
Found in Text Mining only
Akinesia Akinesia BEFREE 30704970
★☆☆☆☆
Found in Text Mining only