Gene Gene information from NCBI Gene database.
Entrez ID 7113
Gene name Transmembrane serine protease 2
Gene symbol TMPRSS2
Synonyms (NCBI Gene)
PRSS10
Chromosome 21
Chromosome location 21q22.3
Summary This gene encodes a protein that belongs to the serine protease family. The encoded protein contains a type II transmembrane domain, a receptor class A domain, a scavenger receptor cysteine-rich domain and a protease domain. Serine proteases are known to
miRNA miRNA information provided by mirtarbase database.
121
miRTarBase ID miRNA Experiments Reference
MIRT734703 hsa-miR-98-5p qRT-PCR 33359190
MIRT734704 hsa-miR-32-3p qRT-PCR 33359190
MIRT734705 hsa-miR-214-3p qRT-PCR 33359190
MIRT1441037 hsa-miR-182 CLIP-seq
MIRT1441038 hsa-miR-3130-3p CLIP-seq
Transcription factors Transcription factors information provided by TRRUST V2 database.
4
Transcription factor Regulation Reference
AR Activation 20308527;21761340
AR Unknown 23192983
ERG Unknown 24418414
NKX3-1 Unknown 24418414
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
25
GO ID Ontology Definition Evidence Reference
GO:0004252 Function Serine-type endopeptidase activity IDA 25122198
GO:0004252 Function Serine-type endopeptidase activity IEA
GO:0004252 Function Serine-type endopeptidase activity TAS
GO:0005515 Function Protein binding IPI 21068237, 32296183, 33741941
GO:0005576 Component Extracellular region IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602060 11876 ENSG00000184012
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O15393
Protein name Transmembrane protease serine 2 (EC 3.4.21.122) (Serine protease 10) [Cleaved into: Transmembrane protease serine 2 non-catalytic chain; Transmembrane protease serine 2 catalytic chain]
Protein function Plasma membrane-anchored serine protease that cleaves at arginine residues (PubMed:32703818, PubMed:35676539, PubMed:37990007, PubMed:38964328). Participates in proteolytic cascades of relevance for the normal physiologic function of the prostat
PDB 7MEQ , 7XYD , 7Y0E , 7Y0F , 8HD8 , 8JHZ , 8JI0 , 8S0L , 8S0M , 8S0N , 8V04 , 8V1F , 8VGT , 8Y1D , 8Y1E , 8Y7X , 8Y7Y , 8Y87 , 8Y88 , 8Y89 , 8Y8A , 8Y8B , 8YOY , 8YQQ , 9IZN
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF15494 SRCR_2 153 248 Scavenger receptor cysteine-rich domain Domain
PF00089 Trypsin 256 484 Trypsin Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in several tissues that comprise large populations of epithelial cells with the highest level of transcripts measured in the prostate gland. Expressed in type II pneumocytes in the lung (at protein level). Expressed strongly
Sequence
Sequence length 492
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG 
  Influenza A
Coronavirus disease - COVID-19
Transcriptional misregulation in cancer
Prostate cancer
 
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
9
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Associated with severe COVID-19 disease Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CANCER PAIN CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
EBV-positive nodal T- and NK-cell lymphoma Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
INSOMNIA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma Adenocarcinoma BEFREE 11745466, 19151660, 20736744, 21040948
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma LHGDN 16575875, 17804708
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of prostate Prostate adenocarcinoma BEFREE 17804708, 18338334, 19734849, 21499238, 31732966
★☆☆☆☆
Found in Text Mining only
amyloidosis IX Amyloidosis Pubtator 30300367 Associate
★☆☆☆☆
Found in Text Mining only
Anaplasia Anaplasia BEFREE 20478527
★☆☆☆☆
Found in Text Mining only
Anxiety Anxiety disorder Pubtator 37142998 Associate
★☆☆☆☆
Found in Text Mining only
Aortic Valve Insufficiency Aortic Valve Insufficiency BEFREE 23130941, 28050800, 30042415
★☆☆☆☆
Found in Text Mining only
Asthma Asthma Pubtator 32348692, 32422146, 33413387, 34198852 Associate
★☆☆☆☆
Found in Text Mining only
Benign Prostatic Hyperplasia Benign Prostatic Hyperplasia BEFREE 11745466, 18338334, 20616363, 22674214, 24961351
★☆☆☆☆
Found in Text Mining only
Bone neoplasms Bone neoplasms BEFREE 31638934
★☆☆☆☆
Found in Text Mining only