Gene Gene information from NCBI Gene database.
Entrez ID 7008
Gene name TEF transcription factor, PAR bZIP family member
Gene symbol TEF
Synonyms (NCBI Gene)
-
Chromosome 22
Chromosome location 22q13.2
Summary This gene encodes a member of the PAR (proline and acidic amino acid-rich) subfamily of basic region/leucine zipper (bZIP) transcription factors. It is expressed in a broad range of cells and tissues in adult animals, however, during embryonic development
miRNA miRNA information provided by mirtarbase database.
295
miRTarBase ID miRNA Experiments Reference
MIRT021130 hsa-miR-186-5p Sequencing 20371350
MIRT046057 hsa-miR-125b-5p CLASH 23622248
MIRT053156 hsa-miR-125a-5p qRT-PCR 24675842
MIRT698678 hsa-miR-499a-3p HITS-CLIP 23313552
MIRT698677 hsa-miR-499b-3p HITS-CLIP 23313552
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
17
GO ID Ontology Definition Evidence Reference
GO:0000785 Component Chromatin ISA
GO:0000978 Function RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific ISA
GO:0003677 Function DNA binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
188595 11722 ENSG00000167074
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q10587
Protein name Thyrotroph embryonic factor
Protein function Transcription factor that binds to and transactivates the TSHB promoter. Binds to a minimal DNA-binding sequence 5'-[TC][AG][AG]TTA[TC][AG]-3'.
PDB 4U5T
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF07716 bZIP_2 232 285 Basic region leucine zipper Coiled-coil
Sequence
MSDAGGGKKPPVDPQAGPGPGPGRAAGERGLSGSFPLVLKKLMENPPREARLDKEKGKEK
LEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPASPTHLAHN
LLLPVAELEGKESASSSTASPPSSSTAIFQPSETVSSTESSLEKERETPSPIDPNCVEVD
VNFNPDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRR
KKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKE
VGKCKTIVSKYETKY
GPL
Sequence length 303
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
10
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ASTHMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ATOPIC ASTHMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CHILDHOOD ONSET ASTHMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
HYPOTHYROIDISM GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Anus, Imperforate Imperforate anus BEFREE 25008186
★☆☆☆☆
Found in Text Mining only
Anxiety Anxiety disorder Pubtator 33834695 Associate
★☆☆☆☆
Found in Text Mining only
Bladder Neoplasm Bladder Neoplasm BEFREE 30515906
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Breast neoplasm Pubtator 39201344 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma of bladder Bladder carcinoma BEFREE 30515906
★☆☆☆☆
Found in Text Mining only
Congenital anomaly of the kidney Multicystic renal dysplasia BEFREE 25008186
★☆☆☆☆
Found in Text Mining only
Congenital heart disease Congenital Heart Disease BEFREE 29325785
★☆☆☆☆
Found in Text Mining only
Congenital malrotation of intestine Congenital malrotation of intestine BEFREE 10471893
★☆☆☆☆
Found in Text Mining only
Depressive Disorder Major depressive disorder Pubtator 23138696, 24581835, 33834695 Associate
★☆☆☆☆
Found in Text Mining only
Depressive Disorder Major Major depressive disorder Pubtator 24581835 Associate
★☆☆☆☆
Found in Text Mining only