Gene Gene information from NCBI Gene database.
Entrez ID 6514
Gene name Solute carrier family 2 member 2
Gene symbol SLC2A2
Synonyms (NCBI Gene)
GLUT2
Chromosome 3
Chromosome location 3q26.2
Summary This gene encodes an integral plasma membrane glycoprotein of the liver, islet beta cells, intestine, and kidney epithelium. The encoded protein mediates facilitated bidirectional glucose transport. Because of its low affinity for glucose, it has been sug
SNPs SNP information provided by dbSNP.
22
SNP ID Visualize variation Clinical significance Consequence
rs5397 G>A,C Conflicting-interpretations-of-pathogenicity, uncertain-significance Coding sequence variant, missense variant, synonymous variant
rs28928874 A>T Pathogenic Missense variant, coding sequence variant
rs76362149 C>A Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs121909741 C>T Pathogenic, uncertain-significance Missense variant, coding sequence variant
rs121909742 G>A,T Pathogenic Stop gained, synonymous variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
44
miRTarBase ID miRNA Experiments Reference
MIRT1358750 hsa-miR-1252 CLIP-seq
MIRT1358751 hsa-miR-3143 CLIP-seq
MIRT1358752 hsa-miR-345 CLIP-seq
MIRT1358753 hsa-miR-3617 CLIP-seq
MIRT1358754 hsa-miR-3662 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
34
GO ID Ontology Definition Evidence Reference
GO:0005353 Function Fructose transmembrane transporter activity IDA 8457197, 23396969, 28083649, 29548810
GO:0005354 Function Galactose transmembrane transporter activity IDA 8457197
GO:0005737 Component Cytoplasm IEA
GO:0005886 Component Plasma membrane IBA
GO:0005886 Component Plasma membrane IDA 28083649
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
138160 11006 ENSG00000163581
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P11168
Protein name Solute carrier family 2, facilitated glucose transporter member 2 (Glucose transporter type 2, liver) (GLUT-2)
Protein function Facilitative hexose transporter that mediates the transport of glucose, fructose and galactose (PubMed:16186102, PubMed:23396969, PubMed:28083649, PubMed:8027028, PubMed:8457197). Likely mediates the bidirectional transfer of glucose across the
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00083 Sugar_tr 13 499 Sugar (and other) transporter Family
Tissue specificity TISSUE SPECIFICITY: Liver, insulin-producing beta cell, small intestine and kidney. {ECO:0000269|PubMed:3399500, ECO:0000269|PubMed:8457197}.
Sequence
Sequence length 524
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Insulin secretion
Prolactin signaling pathway
Glucagon signaling pathway
Type II diabetes mellitus
Insulin resistance
Maturity onset diabetes of the young
Carbohydrate digestion and absorption
Central carbon metabolism in cancer
  Cellular hexose transport
Regulation of insulin secretion
Defective SLC2A2 causes Fanconi-Bickel syndrome (FBS)
Intestinal hexose absorption
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
26
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Congenital long QT syndrome Pathogenic rs121909742 RCV004732549
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Fanconi-Bickel syndrome Pathogenic; Likely pathogenic rs1715182989, rs1350704340, rs121909741, rs1716716102, rs2108256953, rs2108244550, rs1294679246, rs763620441, rs1386374799, rs773581866, rs753980727, rs2473906350, rs761992056, rs985090030, rs2473882353
View all (27 more)
RCV001350487
RCV001783761
RCV002266019
RCV001843322
RCV001843323
View all (37 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Glioma susceptibility 1 Pathogenic rs121909742 RCV005887534
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
SLC2A2-related disorder Likely pathogenic; Pathogenic rs2473923727, rs2473935676, rs771799491, rs771477447, rs772999215, rs1447936042 RCV003399785
RCV003402268
RCV003404427
RCV003974835
RCV003392592
View all (1 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
BREAST NEOPLASMS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CARCINOMA, HEPATOCELLULAR CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Diabetes mellitus type 2, susceptibility to Uncertain significance ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DIABETES MELLITUS, EXPERIMENTAL CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adult Fanconi syndrome Fanconi syndrome CTD_human_DG 11810292
★☆☆☆☆
Found in Text Mining only
Adult Rickets Rickets HPO_DG
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 19749437 Associate
★☆☆☆☆
Found in Text Mining only
Anodontia Anodontia Pubtator 27197745 Associate
★☆☆☆☆
Found in Text Mining only
B-Cell Lymphomas B-Cell Lymphoma BEFREE 19758361
★☆☆☆☆
Found in Text Mining only
Breast Carcinoma Breast Carcinoma CTD_human_DG 19579870
★☆☆☆☆
Found in Text Mining only
Breast Carcinoma Breast Carcinoma BEFREE 19586773, 29913554
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Breast neoplasm Pubtator 34525987, 8700847 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Carcinoma Carcinoma BEFREE 10853020, 9187134
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Hepatocellular carcinoma Pubtator 30176945, 32181701, 33865459 Associate
★☆☆☆☆
Found in Text Mining only