Gene Gene information from NCBI Gene database.
Entrez ID 65083
Gene name Nucleolar protein 6
Gene symbol NOL6
Synonyms (NCBI Gene)
NRAPUTP22bA311H10.1
Chromosome 9
Chromosome location 9p13.3
Summary The nucleolus is a dense subnuclear membraneless organelle that assembles around clusters of rRNA genes and functions in ribosome biogenesis. This gene encodes a nucleolar RNA-associated protein that is highly conserved between species. RNase treatment of
miRNA miRNA information provided by mirtarbase database.
281
miRTarBase ID miRNA Experiments Reference
MIRT032331 hsa-let-7b-5p Proteomics 18668040
MIRT041565 hsa-miR-193b-3p CLASH 23622248
MIRT040840 hsa-miR-18a-3p CLASH 23622248
MIRT734557 hsa-miR-590-3p Western blottingFlow cytometry 32249364
MIRT1188627 hsa-miR-4292 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
21
GO ID Ontology Definition Evidence Reference
GO:0000794 Component Condensed nuclear chromosome IEA
GO:0000794 Component Condensed nuclear chromosome ISS 11895476
GO:0003723 Function RNA binding HDA 22658674
GO:0003723 Function RNA binding IEA
GO:0005515 Function Protein binding IPI 25416956, 32814053, 33199730
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
611532 19910 ENSG00000165271
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9H6R4
Protein name Nucleolar protein 6 (Nucleolar RNA-associated protein) (Nrap)
Protein function Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associat
PDB 7MQ8 , 7MQ9 , 7MQA
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03813 Nrap 178 320 Nrap protein domain 1 Domain
PF17403 Nrap_D2 323 463 Nrap protein PAP/OAS-like domain Domain
PF17404 Nrap_D3 466 629 Nrap protein domain 3 Domain
PF17405 Nrap_D4 640 846 Nrap protein nucleotidyltransferase domain 4 Domain
PF17406 Nrap_D5 848 1003 Nrap protein PAP/OAS1-like domain 5 Domain
PF17407 Nrap_D6 1005 1137 Nrap protein domain 6 Domain
Sequence
MGPAPAGEQLRGATGEPEVMEPALEGTGKEGKKASSRKRTLAEPPAKGLLQPVKLSRAEL
YKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLREVNQRVVRVP
SVPETELTDQAWLPAGVRVPLHQVPYAVKGCFRFLPPAQVTVVGSYLLGTCIRPDINVDV
ALTMPREILQDKDGLNQRYFRKRALYLAHLAHHLAQDPLFGSVCFSYTNGCHLKPSLLLR
PRGKDERLVTVRLHPCPPPDFFRPCRLLPTKNNVRSAWYRGQSPAGDGSPEPPTPRYNTW
VLQDTVLESHLQLLSTILSS
AQGLKDGVALLKVWLRQRELDKGQGGFTGFLVSMLVVFLV
STRKIHTTMSGYQVLRSVLQFLATTDLTVNGISLCLSSDPSLPALADFHQAFSVVFLDSS
GHLNLCADVTASTYHQVQHEARLSMMLLDSRADDGFHLLLMTP
KPMIRAFDHVLHLRPLS
RLQAACHRLKLWPELQDNGGDYVSAALGPLTTLLEQGLGARLNLLAHSRPPVPEWDISQD
PPKHKDSGTLTLGLLLRPEGLTSVLELGPEADQPEAAKFRQFWGSRSELRRFQDGAIREA
VVWEAASMSQKRLIPHQVVTHLLALHADI
PETCVHYVGGPLDALIQGLKETSSTGEEALV
AAVRCYDDLSRLLWGLEGLPLTVSAVQGAHPVLRYTEVFPPTPVRPAFSFYETLRERSSL
LPRLDKPCPAYVEPMTVVCHLEGSGQWPQDAEAVQRVRAAFQLRLAELLTQQHGLQCRAT
ATHTDVLKDGFVFRIRVAYQREPQILKEVQSPEGMISLRDTAASLRLERDTRQLPLLTSA
LHGLQQ
QHPAFSGVARLAKRWVRAQLLGEGFADESLDLVAAALFLHPEPFTPPSSPQVGF
LRFLFLVSTFDWKNNPLFVNLNNELTVEEQVEIRSGFLAARAQLPVMVIVTPQDRKNSVW
TQDGPSAQILQQLVVLAAEALPMLEKQLMDPRGPGDIRTVFRP
PLDIYDVLIRLSPRHIP
RHRQAVDSPAASFCRGLLSQPGPSSLMPVLGYDPPQLYLTQLREAFGDLALFFYDQHGGE
VIGVLWKPTSFQPQPFKASSTKGRMVMSRGGELVMVPNVEAILEDFAVLGEGLVQTV
EAR
SERWTV
Sequence length 1146
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Ribosome biogenesis in eukaryotes   Major pathway of rRNA processing in the nucleolus and cytosol
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
2
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
CUTANEOUS MELANOMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
NEUROBLASTOMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Arthritis Psoriatic Psoriatic arthritis Pubtator 25514237 Associate
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Hepatocellular carcinoma Pubtator 34561331 Associate
★☆☆☆☆
Found in Text Mining only
Cardiomyopathies Cardiomyopathy Pubtator 36672924 Associate
★☆☆☆☆
Found in Text Mining only
Cardiomyopathy Dilated Dilated cardiomyopathy Pubtator 28611399, 30384889, 33534821, 36672924 Associate
★☆☆☆☆
Found in Text Mining only
Cardiomyopathy Hypertrophic Hypertrophic cardiomyopathy Pubtator 36672924 Associate
★☆☆☆☆
Found in Text Mining only
Cardiomyopathy, Dilated Cardiomyopathy BEFREE 28611399
★☆☆☆☆
Found in Text Mining only
Hypertrophic Cardiomyopathy Hypertrophic cardiomyopathy BEFREE 15205937
★☆☆☆☆
Found in Text Mining only
Hypertrophic obstructive cardiomyopathy Hypertrophic cardiomyopathy BEFREE 15205937
★☆☆☆☆
Found in Text Mining only
Migraine Disorders Migraine Pubtator 34380431 Associate
★☆☆☆☆
Found in Text Mining only
Myofibrillar Myopathy Myofibrillar myopathy BEFREE 27443559
★☆☆☆☆
Found in Text Mining only