Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	64743
Gene name	WD repeat domain 13
Gene symbol	WDR13
Synonyms (NCBI Gene)	MG21
Chromosome	X
Chromosome location	Xp11.23
Summary	This gene encodes a member of the WD repeat protein family. WD repeats are minimally conserved regions of approximately 40 amino acids typically bracketed by Gly-His and Trp-Asp (GH-WD), which may facilitate formation of heterotrimeric or multiprotein com

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Show/Hide all (225)

miRTarBase ID	miRNA	Experiments	Reference
MIRT044715	hsa-miR-320a	CLASH	23622248
MIRT532537	hsa-miR-3613-3p	HITS-CLIP	19536157
MIRT532536	hsa-miR-4258	HITS-CLIP	19536157
MIRT532537	hsa-miR-3613-3p	HITS-CLIP	19536157
MIRT532536	hsa-miR-4258	HITS-CLIP	19536157
MIRT532535	hsa-miR-6859-3p	HITS-CLIP	19536157
MIRT696849	hsa-miR-5583-3p	HITS-CLIP	23313552
MIRT696848	hsa-miR-3190-5p	HITS-CLIP	23313552
MIRT696847	hsa-miR-1273f	HITS-CLIP	23313552
MIRT696846	hsa-miR-4534	HITS-CLIP	23313552
MIRT696845	hsa-miR-8082	HITS-CLIP	23313552
MIRT696844	hsa-miR-139-3p	HITS-CLIP	23313552
MIRT696843	hsa-miR-3926	HITS-CLIP	23313552
MIRT696842	hsa-miR-548s	HITS-CLIP	23313552
MIRT614633	hsa-miR-602	HITS-CLIP	23313552
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23313552
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23313552
MIRT665469	hsa-miR-5588-3p	HITS-CLIP	23824327
MIRT665468	hsa-miR-2114-5p	HITS-CLIP	23824327
MIRT665467	hsa-miR-892c-5p	HITS-CLIP	23824327
MIRT665466	hsa-miR-506-5p	HITS-CLIP	23824327
MIRT665465	hsa-miR-873-5p	HITS-CLIP	23824327
MIRT665464	hsa-miR-20b-3p	HITS-CLIP	23824327
MIRT665463	hsa-miR-6720-3p	HITS-CLIP	23824327
MIRT665462	hsa-miR-1207-5p	HITS-CLIP	23824327
MIRT665461	hsa-miR-4763-3p	HITS-CLIP	23824327
MIRT665460	hsa-miR-4736	HITS-CLIP	23824327
MIRT665459	hsa-miR-566	HITS-CLIP	23824327
MIRT665458	hsa-miR-7150	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT651591	hsa-miR-181a-3p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT542510	hsa-miR-3609	PAR-CLIP	21572407
MIRT542509	hsa-miR-548ah-5p	PAR-CLIP	21572407
MIRT542508	hsa-miR-10a-5p	PAR-CLIP	21572407
MIRT542507	hsa-miR-10b-5p	PAR-CLIP	21572407
MIRT542506	hsa-miR-508-5p	PAR-CLIP	21572407
MIRT542505	hsa-miR-520g-3p	PAR-CLIP	21572407
MIRT542504	hsa-miR-520h	PAR-CLIP	21572407
MIRT542503	hsa-miR-3065-5p	PAR-CLIP	21572407
MIRT542502	hsa-miR-6849-3p	PAR-CLIP	21572407
MIRT542501	hsa-miR-339-5p	PAR-CLIP	21572407
MIRT542500	hsa-miR-939-3p	PAR-CLIP	21572407
MIRT542499	hsa-miR-4421	PAR-CLIP	21572407
MIRT542498	hsa-miR-5699-3p	PAR-CLIP	21572407
MIRT542497	hsa-miR-766-3p	PAR-CLIP	21572407
MIRT542496	hsa-miR-1285-3p	PAR-CLIP	21572407
MIRT542495	hsa-miR-3187-5p	PAR-CLIP	21572407
MIRT542494	hsa-miR-5189-5p	PAR-CLIP	21572407
MIRT542493	hsa-miR-612	PAR-CLIP	21572407
MIRT542491	hsa-miR-6860	PAR-CLIP	21572407
MIRT542492	hsa-miR-4725-5p	PAR-CLIP	21572407
MIRT542490	hsa-miR-4786-5p	PAR-CLIP	21572407
MIRT542489	hsa-miR-769-5p	PAR-CLIP	21572407
MIRT542488	hsa-miR-661	PAR-CLIP	21572407
MIRT542487	hsa-miR-196a-3p	PAR-CLIP	21572407
MIRT542486	hsa-miR-6512-3p	PAR-CLIP	21572407
MIRT542485	hsa-miR-6720-5p	PAR-CLIP	21572407
MIRT532544	hsa-miR-548ac	PAR-CLIP	22012620
MIRT532543	hsa-miR-548bb-3p	PAR-CLIP	22012620
MIRT532542	hsa-miR-548d-3p	PAR-CLIP	22012620
MIRT532541	hsa-miR-548h-3p	PAR-CLIP	22012620
MIRT532540	hsa-miR-548z	PAR-CLIP	22012620
MIRT532539	hsa-miR-3667-5p	PAR-CLIP	22012620
MIRT532538	hsa-miR-451b	PAR-CLIP	22012620
MIRT532537	hsa-miR-3613-3p	PAR-CLIP	22012620
MIRT532536	hsa-miR-4258	PAR-CLIP	22012620
MIRT532535	hsa-miR-6859-3p	PAR-CLIP	22012620
MIRT532534	hsa-miR-4696	PAR-CLIP	22012620
MIRT614632	hsa-miR-153-5p	HITS-CLIP	27418678
MIRT614632	hsa-miR-153-5p	HITS-CLIP	27418678
MIRT651591	hsa-miR-181a-3p	HITS-CLIP	27418678
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	27418678
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	27418678
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	27418678
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	27418678
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	27418678
MIRT614631	hsa-miR-4294	HITS-CLIP	27418678
MIRT614631	hsa-miR-4294	HITS-CLIP	27418678
MIRT614633	hsa-miR-602	HITS-CLIP	27418678
MIRT614633	hsa-miR-602	HITS-CLIP	27418678
MIRT614633	hsa-miR-602	HITS-CLIP	27418678
MIRT614633	hsa-miR-602	HITS-CLIP	27418678
MIRT614633	hsa-miR-602	HITS-CLIP	27418678
MIRT532537	hsa-miR-3613-3p	HITS-CLIP	19536157
MIRT532536	hsa-miR-4258	HITS-CLIP	19536157
MIRT532537	hsa-miR-3613-3p	HITS-CLIP	19536157
MIRT532536	hsa-miR-4258	HITS-CLIP	19536157
MIRT532535	hsa-miR-6859-3p	HITS-CLIP	19536157
MIRT696849	hsa-miR-5583-3p	HITS-CLIP	23313552
MIRT696848	hsa-miR-3190-5p	HITS-CLIP	23313552
MIRT696847	hsa-miR-1273f	HITS-CLIP	23313552
MIRT696846	hsa-miR-4534	HITS-CLIP	23313552
MIRT696845	hsa-miR-8082	HITS-CLIP	23313552
MIRT696844	hsa-miR-139-3p	HITS-CLIP	23313552
MIRT696843	hsa-miR-3926	HITS-CLIP	23313552
MIRT696842	hsa-miR-548s	HITS-CLIP	23313552
MIRT614633	hsa-miR-602	HITS-CLIP	23313552
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23313552
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23313552
MIRT665469	hsa-miR-5588-3p	HITS-CLIP	23824327
MIRT665468	hsa-miR-2114-5p	HITS-CLIP	23824327
MIRT665467	hsa-miR-892c-5p	HITS-CLIP	23824327
MIRT665466	hsa-miR-506-5p	HITS-CLIP	23824327
MIRT665465	hsa-miR-873-5p	HITS-CLIP	23824327
MIRT665464	hsa-miR-20b-3p	HITS-CLIP	23824327
MIRT665463	hsa-miR-6720-3p	HITS-CLIP	23824327
MIRT665462	hsa-miR-1207-5p	HITS-CLIP	23824327
MIRT665461	hsa-miR-4763-3p	HITS-CLIP	23824327
MIRT665460	hsa-miR-4736	HITS-CLIP	23824327
MIRT665459	hsa-miR-566	HITS-CLIP	23824327
MIRT665458	hsa-miR-7150	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT651591	hsa-miR-181a-3p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT614633	hsa-miR-602	HITS-CLIP	23824327
MIRT614632	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT614631	hsa-miR-4294	HITS-CLIP	23824327
MIRT614630	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT542510	hsa-miR-3609	PAR-CLIP	21572407
MIRT542509	hsa-miR-548ah-5p	PAR-CLIP	21572407
MIRT542508	hsa-miR-10a-5p	PAR-CLIP	21572407
MIRT542507	hsa-miR-10b-5p	PAR-CLIP	21572407
MIRT542506	hsa-miR-508-5p	PAR-CLIP	21572407
MIRT542505	hsa-miR-520g-3p	PAR-CLIP	21572407
MIRT542504	hsa-miR-520h	PAR-CLIP	21572407
MIRT542503	hsa-miR-3065-5p	PAR-CLIP	21572407
MIRT542502	hsa-miR-6849-3p	PAR-CLIP	21572407
MIRT542501	hsa-miR-339-5p	PAR-CLIP	21572407
MIRT542500	hsa-miR-939-3p	PAR-CLIP	21572407
MIRT542499	hsa-miR-4421	PAR-CLIP	21572407
MIRT542498	hsa-miR-5699-3p	PAR-CLIP	21572407
MIRT542497	hsa-miR-766-3p	PAR-CLIP	21572407
MIRT542496	hsa-miR-1285-3p	PAR-CLIP	21572407
MIRT542495	hsa-miR-3187-5p	PAR-CLIP	21572407
MIRT542494	hsa-miR-5189-5p	PAR-CLIP	21572407
MIRT542493	hsa-miR-612	PAR-CLIP	21572407
MIRT542491	hsa-miR-6860	PAR-CLIP	21572407
MIRT542492	hsa-miR-4725-5p	PAR-CLIP	21572407
MIRT542490	hsa-miR-4786-5p	PAR-CLIP	21572407
MIRT542489	hsa-miR-769-5p	PAR-CLIP	21572407
MIRT542488	hsa-miR-661	PAR-CLIP	21572407
MIRT542487	hsa-miR-196a-3p	PAR-CLIP	21572407
MIRT542486	hsa-miR-6512-3p	PAR-CLIP	21572407
MIRT542485	hsa-miR-6720-5p	PAR-CLIP	21572407
MIRT532544	hsa-miR-548ac	PAR-CLIP	22012620
MIRT532543	hsa-miR-548bb-3p	PAR-CLIP	22012620
MIRT532542	hsa-miR-548d-3p	PAR-CLIP	22012620
MIRT532541	hsa-miR-548h-3p	PAR-CLIP	22012620
MIRT532540	hsa-miR-548z	PAR-CLIP	22012620
MIRT532539	hsa-miR-3667-5p	PAR-CLIP	22012620
MIRT532538	hsa-miR-451b	PAR-CLIP	22012620
MIRT532537	hsa-miR-3613-3p	PAR-CLIP	22012620
MIRT532536	hsa-miR-4258	PAR-CLIP	22012620
MIRT532535	hsa-miR-6859-3p	PAR-CLIP	22012620
MIRT532534	hsa-miR-4696	PAR-CLIP	22012620
MIRT1489760	hsa-miR-15a	CLIP-seq
MIRT1489761	hsa-miR-15b	CLIP-seq
MIRT1489762	hsa-miR-16	CLIP-seq
MIRT1489763	hsa-miR-195	CLIP-seq
MIRT1489764	hsa-miR-214	CLIP-seq
MIRT1489765	hsa-miR-3619-5p	CLIP-seq
MIRT1489766	hsa-miR-3918	CLIP-seq
MIRT1489767	hsa-miR-424	CLIP-seq
MIRT1489768	hsa-miR-497	CLIP-seq
MIRT1489769	hsa-miR-761	CLIP-seq
MIRT1489770	hsa-miR-765	CLIP-seq
MIRT2147696	hsa-miR-3135b	CLIP-seq
MIRT2147697	hsa-miR-3652	CLIP-seq
MIRT2147698	hsa-miR-4430	CLIP-seq
MIRT2147699	hsa-miR-485-5p	CLIP-seq

Show/Hide all (6)

GO ID	Ontology	Definition	Evidence
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005886	Component	Plasma membrane	IDA
GO:0034451	Component	Centriolar satellite	IDA
GO:1904691	Process	Negative regulation of type B pancreatic cell proliferation	IEA
GO:1990841	Function	Promoter-specific chromatin binding	IEA

MIM	HGNC	e!Ensembl
300512	14352	ENSG00000101940

Q9H1Z4

Protein name

WD repeat-containing protein 13

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00400	WD40	207 → 244	WD domain, G-beta repeat	Repeat
PF00400	WD40	444 → 481	WD domain, G-beta repeat	Repeat

Tissue specificity

TISSUE SPECIFICITY: Widely expressed.

Sequence

MAAVWQQVLAVDARYNAYRTPTFPQFRTQYIRRRSQLLRENAKAGHPPALRRQYLRLRGQ
LLGQRYGPLSEPGSARAYSNSIVRSSRTTLDRMEDFEDDPRALGARGHRRSVSRGSYQLQ
AQMNRAVYEDRPPGSVVPTSAAEASRAMAGDTSLSENYAFAGMYHVFDQHVDEAVPRVRF
ANDDRHRLACCSLDGSISLCQLVPAPPTVLRVLRGHTRGVSDFAWSLSNDILVSTSLDAT
MRIWASEDGRCIREIPDPDSAELLCCTFQPVNNNLTVVGNAKHNVHVMNISTGKKVKGGS
SKLTGRVLALSFDAPGRLLWAGDDHGSVFSFLFDMATGKLTKAKRLVVHEGSPVTSISAR
SWVSREARDPSLLINACLNKLLLYRVVDNEGTLQLKRSFPIEQSSHPVRSIFCPLMSFRQ
GACVVTGSEDMCVHFFDVERAAKAAVNKLQGHSAPVLDVSFNCDESLLASSDASGMVIVW
RREQK

Sequence length

485

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (3)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Esophageal atresia	Uncertain significance	ClinVar Disgenet	★★★★★ ★★★☆☆ Reported in Unknown/Other Associations (≥2 sources)
INTELLECTUAL DISABILITY	—	Disgenet, GenCC Disgenet, GenCC	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Pyloric stenosis	Uncertain significance	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (8)

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining
Colitis	Colitis	BEFREE	28222755		★★★★★ ★☆☆☆☆ Found in Text Mining only
Colorectal Neoplasms	Colorectal Neoplasms	BEFREE	28222755		★★★★★ ★☆☆☆☆ Found in Text Mining only
Diabetes	Diabetes	BEFREE	30369599		★★★★★ ★☆☆☆☆ Found in Text Mining only
Diabetes Mellitus	Diabetes Mellitus	BEFREE	30369599		★★★★★ ★☆☆☆☆ Found in Text Mining only
Diabetes Mellitus, Insulin-Dependent	Diabetes Mellitus	BEFREE	30369599		★★★★★ ★☆☆☆☆ Found in Text Mining only
Diabetes Mellitus, Non-Insulin-Dependent	Diabetes Mellitus	BEFREE	30369599		★★★★★ ★☆☆☆☆ Found in Text Mining only
Intellectual Disability	Intellectual developmental disorder	Pubtator	20655035, 34946860	Associate	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Neoplasms	Neoplasms	BEFREE	28222755		★★★★★ ★☆☆☆☆ Found in Text Mining only

WDR13 (WD repeat domain 13)